BGIOSGA000080

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Revision as of 09:59, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000080| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000080, complete gene.| tag = OsI_052...")
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Gene Name

BGIOSGA000080

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000080, complete gene.

LocusTag

OsI_05262

Ensembl Transcript ID

BGIOSGA000080-TA

Ensembl Protein ID

BGIOSGA000080-PA

Length

3528

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46214820..46218347

Sequence Coding Region

46218295..46218347,46217416..46217482,46217150..46217332,46216238..46216666,46215910..46215976
,46214820..46214923

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46214820..46218347 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46214820..46218347 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGCCGCCGTACTCCAACCCAACTTCTATCGCCTTTGAAACCCTAGGCAGGCCTGCATTAACTAGTGCCAGGGCAGCAATAATGGATTTGTGCGACGACACTCATTTCCCATGGGAGGGGTCCCATACTATTGTTGCCAGCAAGCGGAAAGCTAAGGATTTTAATGGCAAAAATCTGAACTTGTTTAATGGAACTTATAAGATGGTGGAAACCACAGTTGATGTTATGATAAGAAAAGGAACAAACATGAGACTCGAAAGCTATGAGTTTTTGAGTGATTTCAAGCATGGCAACGCTGTGCTAGGGCCATTCAAACAGGACTGGAGTCATGTCCAAGGCCTCATGACTTGGTGTAAAGAACAATCTGGTTTAAAAATGGACTTTCTTACCAAGAGTTTCTATGATTTCATCGGATCTACCGACTGCACAGTAATCAAGCTGAGAAACTACCCTGATGATTGGGATGAAAAAAAGAAAGGTGATTATTTGCTCACACTCGCAGAAGTAAACCACGGAGTTCTTAAAGATAAGTTGAAGAGTAGGGATGATTTTCATTGGCCGTTTGTGAAGCTGCCTAAGCTGGAGCAGAACTTACCACCAATGTTACAGCAAATTCTTAGTGGGGAGAGACAGATGAAAAGAAAGTTCGACGTGACATTCTTTTGTGATTATATCAACCTCTTGAGAAACTCCTACAAGAAATTCAATGAATTACCAGAAAATGTTAAGGGTGGCCAGATTATAATATCTGGAAGTGGCCTTGTAAAAAATAGCTTTAGTGCTTTGCATTTGACCAGAACACTGCTTGATCTCAATGATGGTGATGCCGGTGCCCGCGCTGACATTCTCAGGACATATGGTGCTGTTCTGCAGGTCCGATCCTTAGATGGCTCCTGTTAG</cdnaseq>

Protein Sequence

<aaseq>MKPPYSNPTSIAFETLGRPALTSARAAIMDLCDDTHFPWEGSHTIVASKRKAKDFNGKNLNLFNGTYKMVETTVDVMIRKGTNMRLESYEFLSDFKHGNAVLGPFKQDWSHVQGLMTWCKEQSGLKMDFLTKSFYDFIGSTDCTVIKLRNYPDDWDEKKKGDYLLTLAEVNHGVLKDKLKSRDDFHWPFVKLPKLEQNLPPMLQQILSGERQMKRKFDVTFFCDYINLLRNSYKKFNELPENVKGGQIIISGSGLVKNSFSALHLTRTLLDLNDGDAGARADILRTYGAVLQVRSLDGSC</aaseq>

Gene Sequence

<dnaseqindica>1..53#866..932#1016..1198#1682..2110#2372..2438#3425..3528#ATGAAGCCGCCGTACTCCAACCCAACTTCTATCGCCTTTGAAACCCTAGGCAGGTAGGCGGTTGCTTTGCCTTCGGTGCGGTTGTTGTGCTGACTCTCTCCTCGCCCTCGCCCTCGCCCTCACCCTCGTCGCCGGCGATTCCTCCGCCGTACTCCAACCCTAGCTGTCGCCTTTGAAACCCTAAGTAGGCACCTAATTAAGTGCTAACTCTTTCTGAATGTAATATCACAAATCTTTCCCAACTAATTCAGTAGCATTCGGTTAAGCCCAACACCATACAGTTGTTGGTACTGAAACTTTTTCCCCCCTTTTCCGTTGTCTTCAGAAGTAACAATCAGTCAGTTACTTCAGTAACCTGACACTTGTGTTCTGATTGCCTGATCCAAGTTGTGATCTTAGTTATCTGCTTCTTAGCTTGTGAATACGAGTAAGTAGTAGTAAAATTGGTGTGTTTTGGTAGATTTTGCTTGTAATTCCTAGCGGTTGGTAACTTGGTATATTCATAATTCGGCTAAGGTTTGATAAAAGCTGCAGTGCTGCACATCAGCCTTTTTTTCCCTGTGCACATTTGCTTTTCTTGTGTTTATGCTACTTGCTTGATTTATTGCTATTGTTCCTTTGCTCCTGGAGGTGGCCAGGGGTAGCCTGCCTGCCTGCCTCATTCATGTTTTCTATCATTTAGTGGCTATTCGCTTTGAAGAAATTAATGATTTATGCAGCTGTTCCTTTAAATAATTATTGGTTAATCCCTTGAATTTATAGCTGTCTCCTCGAGAAGAATCCTGCTTAAGTTGATTTACCTCCGGGTGTTTATGGTCTTTCAAATTGCTAAGCATAATCTTGAACTTTCCAAGAAAAAAAACAGGCCTGCATTAACTAGTGCCAGGGCAGCAATAATGGATTTGTGCGACGACACTCATTTCCCATGGGAGGTAATTTTTTTAAAACCAGAATCAGCCAAGCGCCAAATTTATGATAATTATTCTTCGCATATGTATAATTTTGTTCCTTGCAGGGGTCCCATACTATTGTTGCCAGCAAGCGGAAAGCTAAGGATTTTAATGGCAAAAATCTGAACTTGTTTAATGGAACTTATAAGATGGTGGAAACCACAGTTGATGTTATGATAAGAAAAGGAACAAACATGAGACTCGAAAGCTATGAGTTTTTGAGTGATTTCAAGCATGGCAACGCTGTGGTACTCCTGGACTACACAGTCCGGAAACAAGGGGAGTTTCATCGTCACACAAGTTGATGGGTCATTCACTGCCTGGTTTGAAACAGGTGGAAAAGAGCTCTGCTTTGACTCATCTGGTCATATTACTCAGTTATTTAAAGACATGATTGTGTGAGTATCTTTATTGTTGTCCATATTTTTAACTTTCTTCTTGTTATGTTCTCTGAAATCATTTTTATTTGTGTGAAGCGATTTTTACGATCTGACCTGGAGTTTGCACAAGAGGCACTTAGTCATGCAGAATTTTGTAAAGGAAAATATATACGTCAAAATCTTTGATGGCGTACCCAAACTTATGATTCTACTAACTGAAGGTATATATTTGTTGCTAGTAACTTAATGGAAGTTCACAGTTTTTTTTATATATATAAACAATGGCAATATAACTTGTACACTGGATTGAAAATGCGATTTAAATTTTGTACAGTTAAATTGGTTGATCAGCTAGGGCCATTCAAACAGGACTGGAGTCATGTCCAAGGCCTCATGACTTGGTGTAAAGAACAATCTGGTTTAAAAATGGACTTTCTTACCAAGAGTTTCTATGATTTCATCGGATCTACCGACTGCACAGTAATCAAGCTGAGAAACTACCCTGATGATTGGGATGAAAAAAAGAAAGGTGATTATTTGCTCACACTCGCAGAAGTAAACCACGGAGTTCTTAAAGATAAGTTGAAGAGTAGGGATGATTTTCATTGGCCGTTTGTGAAGCTGCCTAAGCTGGAGCAGAACTTACCACCAATGTTACAGCAAATTCTTAGTGGGGAGAGACAGATGAAAAGAAAGTTCGACGTGACATTCTTTTGTGATTATATCAACCTCTTGAGAAACTCCTACAAGAAATTCAATGAATTACCAGAAAATGTTAAGGTAATTGCTTAAGATGTTTCCAGATTGAATAATACCTTCTTTTACTGCAGGATTTGTTGTATTCAAACATCTTATGTTTTGACAGGCTTTATGCATAAACCAGGATGGCTTCATTAAACTGATAGATGGGTGGTCTCCTGAGTTTTGGACCAAGATCTACGAGAAAATTGGTAAAAACAGTCTGTGCCTTTGGTTTTAGGCCTTCGTTTGACTGTGCTCTTTTTGGAATAGGGGATTTATGACGGTGTTCTCTTTTTGCAGGGTGGCCAGATTATAATATCTGGAAGTGGCCTTGTAAAAAATAGCTTTAGTGCTTTGCATTTGACCAGTGAGTACTGCATTAATACTTAATGTATGATTCCTGTACGCTTTCAGTTCAAGATATAACCTTAGTTATCATTGTTCTATGTTTGAGTACCTCATTAGATTGCTGCATTTATATAGCTTGTTTGGGATATGGATTTCCATCCCTCAAGGGGATGTCCCCTCGTTGATTGTATGTCATCTAAATAGTTATAAAAAAATTTAAAAAAATTGACAACATAGATTAATATGAAATATATCATGAGAACTGTGGTGCTCAATTGTTAAGAGGTAATGATCTCCTTGTGAGGGCTAATTTTGTGCCAGTTTGATCCTTGCTGTGTAGTGGTAGGAGGTTGTGGGTGGCAAGCTGTTATGAAACTCAGATGTTTTTTTTCTTCCTTTTCAGTCTTTTGTATCAGACTCTGTAATTCCTGCTTCAGGTCCTTAATCTAAAAAAAAAGTTCAATGGGCTTTGGAAAAATCTAATACTTTCTCCGTTTCACAATGTAAGTCATTCTAGCATTTTCTATATTCATATTGATGTTAATGAATCTAGATAGATATATATGTCTAGATTCATTAACATCAAAATGAATGTGGGAAATGTTAGAATAACTTACATTGTGAAACGGAGTGAGTAACTGCTACTCAAATTCTATGCACAAAGATTTGTACTGTCCAGATGAAAAAAAGGGAACTTGGTGTGTTTTGTGCTCTAATCCTGAAAAAATGTTCAGCACATTCTCTATGAATGTCCTGTTGCAAAATTCACCTGGTGTGTTTCCCGTGATGCTTGTGGCTGGAGTTTTCTCCCCTCTGCTTTTGAATCTTGTTATTTCTGGAGTAGTTGGGCTAGCCGGCTCCAAAAGGAACAGAATCAAAATCCTTTGCTTTGCTGCTGTTTGTTTATCAACTTTGGCTGATGGGCAACGATATGTTTTTTCAAACAAAAACTGTTATCTACTCCCCCCTGACTTTGATTTTCCGTGTCATTTCCTCCTTGTTTAGGAACACTGCTTGATCTCAATGATGGTGATGCCGGTGCCCGCGCTGACATTCTCAGGACATATGGTGCTGTTCTGCAGGTCCGATCCTTAGATGGCTCCTGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000080