BGIOSGA000085

From RiceWiki
Revision as of 10:00, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000085| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000085, complete gene.| tag = OS01G09...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000085

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000085, complete gene.

LocusTag

OS01G0955650

Ensembl Transcript ID

BGIOSGA000085-TA

Ensembl Protein ID

BGIOSGA000085-PA

Length

801

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:46142491..46143291

Sequence Coding Region

46143212..46143291,46142851..46142871,46142491..46142731

Genome Context

<gbrowseImage1> name=IndicaChromosome01:46142491..46143291 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:46142491..46143291 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGTCGTCGGAGATCCAGCGGAGGCCGGGGAGGATCCTCTTGGCGGCGAGCGCGCACAGCGGGGCGCCGAACAGGGCTTTTTTCGACGGTATCTTGTGGTCACCGAACTTACTCGATAAGCTCAACGATGGCATGGTAGAAATCTTCGAAGGAATCTACATTAGCAACATACTTCTCATAATTTGCTTCCATGAACTGAATGAGTTTCTCCGTATCAGCCTTCTCACTCTTCATAGCAGCCTGGCTCTGATCCTTCTCGCTCTTCACGACAGCCTGATGAGGACTCTGATTCTTCTCGCTCTCCAGGGCAGTCTGAATCCGGTCTTCATCTTTTAG</cdnaseq>

Protein Sequence

<aaseq>MATSSEIQRRPGRILLAASAHSGAPNRAFFDGILWSPNLLDKLNDGMVEIFEGIYISNILLIICFHELNEFLRISLLTLHSSLALILLALHDSLMRTLILLALQGSLNPVFIF</aaseq>

Gene Sequence

<dnaseqindica>1..80#421..441#561..801#ATGGCGACGTCGTCGGAGATCCAGCGGAGGCCGGGGAGGATCCTCTTGGCGGCGAGCGCGCACAGCGGGGCGCCGAACAGGTACATGATGAAGTCCATGGTCGCCTTGCCCAGGGTGAAGCTGTCCCGCCTGATCACCTCCTTGCCGATCTTGATGAACTCCTCCCTCTTCAACTGTCCCTGCTCCGTGTGATGCTTCTGCACGCACAACAACCACCCACCTCAGCTAGACTCACTCCACCCACTACTTTCTCGGTCTTATAAAAAACTAATTTATTATTGGATGTAAACGAATCTGAATATATACTTGTCTAGATTTATAATACTATGGTGTGTACTTAGATTCGTTTTTATTAGGACGGATGGAGTAATTGTGTGATGATGCTCTAGCAATATTGCTCACCTCATACGCTTCCTTCAGGGCTTTTTTCGACGGTATCTTGTACTGCACCTGGCCGCGCTCCTCGCAAAACTTTCTGAAGATGACAAAATTTGTTAACAATGTGAGTGCAGCTGAACTGAATGTACACGTATTTTTCTTTTCTTTTTCTGAGACTGCAGGTGGTCACCGAACTTACTCGATAAGCTCAACGATGGCATGGTAGAAATCTTCGAAGGAATCTACATTAGCAACATACTTCTCATAATTTGCTTCCATGAACTGAATGAGTTTCTCCGTATCAGCCTTCTCACTCTTCATAGCAGCCTGGCTCTGATCCTTCTCGCTCTTCACGACAGCCTGATGAGGACTCTGATTCTTCTCGCTCTCCAGGGCAGTCTGAATCCGGTCTTCATCTTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000085