BGIOSGA000099

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Revision as of 10:00, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000099| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000099, complete gene.| tag = OsI_052...")
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Gene Name

BGIOSGA000099

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000099, complete gene.

LocusTag

OsI_05221

Ensembl Transcript ID

BGIOSGA000099-TA

Ensembl Protein ID

BGIOSGA000099-PA

Length

4342

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:45936814..45941155

Sequence Coding Region

45941071..45941155,45940880..45940977,45940351..45940423,45939713..45939819,45939517..45939640
,45938937..45939112,45937912..45938007,45937733..45937831,45937543..45937617
,45937014..45937202,45936814..45936933

Genome Context

<gbrowseImage1> name=IndicaChromosome01:45936814..45941155 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:45936814..45941155 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCACCCGGAGCGCCTTCCTCGCCGCCGGCGTTGCCATCGCCGCCGCCATCTTCCTCCTCCGCCCTGCTTCCGACCTGTCGAGGCCAGGGGATTTGGGGGAAGCCGTCGCTGACATGATACTGGCCAATGCCACCATCTACACCGCCGACCCCGCAATGCCGTTCGCCGAAGCCATGGCCTTAGCGCGGGTGCCACTTCGAGGGGTTACAAGCAAAGATGATTTCATCAACAGGGTCAAGGAAGCTGTCAAAGATAAGCATCCTGGGCAATGGATATTTGGAGGAGGTTGGAACAATGATTTTTGGGGAGGTGATTACCCCACTGCTGCTTGGTTGGATGATATATCTCCTGATAATCCTGTCTGGCTTTCACGCATGGATGGACATATGGGAATAGCCAATTCACTAGCTATGAGAATGGCTGGGATCGACAAAAACACAAACAATCCAGTTGGTGGAACTATTATGAGAACAACTGAAGGAGAGCCTACCGGTCTTCTAGTTGATGCTGCTATGAAGCTTGTGTTTGATGTTATCTCAGAAGTCTCTATCCATGAAAGGAGAGATGCTCTTCTTAGGGCAAGTAGACACGCCCTAATGAGGGGGGTGACTACTGTTGTTGATGTTGGAAGTTATTTCCCTGGAAAGTCAGAAAAGCAACACTACAAGGATGATCCTAGAAGTTATGGTCTCCAATTGGTTGACATGGATTATCTTCTCAATACAACATTAGAATTAGACAAATCAGGACTACAGATTGCCATACATGCAATTGGAGATAAAGCCAATGATATGCTACTCGATATGTATGAGAAGGTGGTTGATTTGAATGGAATGAAGGATCATAGATTCCGGATTGAGCATGCTCAACACCTTGCTCCCGGTGCAGCCAAGCGCTTTGGCAAACATGGTATTATTGCATCTGTGCAGTTTACAAGTGTGGACGACAATCTTCATCTTCTGAAAGATTTGCTTATTGTTTGCCAGCCTGATCATATATTAGATGATGCCAATTCTGCTGGGAAGAAAATTGGGATAGAACGAGCTGAGCGAAGCTCCTATTCTTTTCGGTCACTATTAGATGGTGGTGCACATCTGGCTTTTGGTTCTGATTGGCCTGTTTCAGATATTAATCCATTACAAGCTATTCGAACTGCAGTATCCCGCAAACCTGCTGGATGGGAAGTCCCTTGGATCCCTGCGGAACGCTTATCTTTAGATGATTCTCTGAAAGCGTAA</cdnaseq>

Protein Sequence

<aaseq>MSTRSAFLAAGVAIAAAIFLLRPASDLSRPGDLGEAVADMILANATIYTADPAMPFAEAMALARVPLRGVTSKDDFINRVKEAVKDKHPGQWIFGGGWNNDFWGGDYPTAAWLDDISPDNPVWLSRMDGHMGIANSLAMRMAGIDKNTNNPVGGTIMRTTEGEPTGLLVDAAMKLVFDVISEVSIHERRDALLRASRHALMRGVTTVVDVGSYFPGKSEKQHYKDDPRSYGLQLVDMDYLLNTTLELDKSGLQIAIHAIGDKANDMLLDMYEKVVDLNGMKDHRFRIEHAQHLAPGAAKRFGKHGIIASVQFTSVDDNLHLLKDLLIVCQPDHILDDANSAGKKIGIERAERSSYSFRSLLDGGAHLAFGSDWPVSDINPLQAIRTAVSRKPAGWEVPWIPAERLSLDDSLKA</aaseq>

Gene Sequence

<dnaseqindica>1..85#179..276#733..805#1337..1443#1516..1639#2044..2219#3149..3244#3325..3423#3539..3613#3954..4142#4223..4342#ATGTCCACCCGGAGCGCCTTCCTCGCCGCCGGCGTTGCCATCGCCGCCGCCATCTTCCTCCTCCGCCCTGCTTCCGACCTGTCGAGTACGCGCGCCACTCATTTCTGCTACTCGCTTCCCACGAAGGCATCTGTCACGGTGAACTGAACTAATTTGTTTCTGCATCTGCGCTCCTCAGGGCCAGGGGATTTGGGGGAAGCCGTCGCTGACATGATACTGGCCAATGCCACCATCTACACCGCCGACCCCGCAATGCCGTTCGCCGAAGCCATGGCCGTACGCGCCGGCCGCGTTCTCCACGTGGGCGGATACGACTCTGTTAAGGTCGTGTTCAATTCGTTGCTGCTCTTTTTTTTCTTCTCATTTTGTTCTGTGTTTAGGTTCAGACTTCAGAGAGTAACTGCAATTTTTTTTTAAAAAAAATGTTCGTTGCTTTATTGCTGTATAAGCACCAATGAACCATGTTTTTGTACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGCACTTCATTGATGGTGGGTTGCAGGTAAAACCTCTTATCTACCATTGCATTCGGCATGGACAAACTGTGATATTACAAGTACAGTAATGAATTAGGTAAATTTGTTTTCAGTATGTTTTGTTTTGTGATGCTGCTTTGTGAACTCACCTGTAGTTAGCGCGGGTGCCACTTCGAGGGGTTACAAGCAAAGATGATTTCATCAACAGGGTCAAGGAAGCTGTCAAAGGTTTCGAACGACTATACTGTTCCTTCTCCTGTTTTAGCCTTTCTGTTTTCTTTTTTAAAAATCTATCTTGCTTCTTAGCATGATATATGACTTTACACAACATGAATCAGGGGGATGATTACACAACATAATTAATTAGATTTAGTACATGTGTATTGAATTATGAGTGATGAGATGACACTTTTTGCATAAAGGCAGTCAAAAACAGATGCCATTCAAAAACTGCTAATCTATATAAACCTAAGTCCTTCTGCAGATCTACATTATTTTTATTCATATTTGAATGATTTTGATCAACTCCAGTCTTCACTTTAGTTCATCCATAAATGCCTTCTTGGCAAATAAACAAAAAAATATAAAAAAAAACCCTTGTGCCTAGTCTACTTGAAGATATGAAACATCGTCTTAATACACTCGATCGGTTTAAATTTGTGAAACTTTAGCATATAAATAATGCATTGCTCATAGTATCTCTAGGATTTTTTTCAGAAACCAATTTTGATAGGAACCTGAGAATTATCTTCTGATCAGATAAGCATCCTGGGCAATGGATATTTGGAGGAGGTTGGAACAATGATTTTTGGGGAGGTGATTACCCCACTGCTGCTTGGTTGGATGATATATCTCCTGATAATCCTGTGGGTTTTCAAACTTGCTCCTCTTTTGAGAAGCCATGACAGAAGGTGTATCAGTAACTTATTGAACTGCAGGTCTGGCTTTCACGCATGGATGGACATATGGGAATAGCCAATTCACTAGCTATGAGAATGGCTGGGATCGACAAAAACACAAACAATCCAGTTGGTGGAACTATTATGAGAACAACTGAAGGAGGTAACCTTTATAAAAGTTAGCATAGCCCCTTTTTTACCTTTATTTGTCAGTACTTTCTATGGTTAATCTTGAACTAAAGATTACCAATTTAGCGAGCATGCAGAAATTGCTAGTTTAAAATACAGAAAATGTCTCACTGACAAAAAAGAACTATAAGTTCAAGTCAGTTAATTAAATTGCAAATATAGTGAATTGTGTTCACATGTACCTGGTAAGAAGCTTTTTATATAGTTTCAGAATATTATCATGGTCCCTGTATGACATTTTCAGTGGATCATTCTTCAATATGAAATATAGATTACTCTTTCGAAGGACCGTTCTTCACTATCAAAATATGGATTATTCATTCCTGTGATTAAGTAAAAGGACTGACCAAATTATCTGATCCACATCATTGCTTGTAGAGCCTACCGGTCTTCTAGTTGATGCTGCTATGAAGCTTGTGTTTGATGTTATCTCAGAAGTCTCTATCCATGAAAGGAGAGATGCTCTTCTTAGGGCAAGTAGACACGCCCTAATGAGGGGGGTGACTACTGTTGTTGATGTTGGAAGTTATTTCCCTGGAAAGTCAGAAAAGCAAGTCTGGCAAGATTTTACAGGTATACTGTATCACTTGCTTTATATCGCTATTCTGAGAAATGCAACTCAGATATGAAACATCCTTCGTGTATATCTACTCACTAGTTGACAATATGAAATATTTGTATTCAGTCCCCAAAATAAAAAAACTGTAGTTGGAGCCAAAACTTGTATTGTATTGCACAAGTCGCAGTAAAGCTTAAGTGATATTTTAGATGATCCCTGGTGAAATTGTATGTTATTCTTTTGTACCATTTTTATGGATCCGCTTTTGCTTTTATCCCATCTATGGCCTTATGTGTACCCCTTGATGCAAGTACTACGTTTCCATTAATACAGATATATACTCGAATGGGCTCATTCTGTCGAAACAATGATTATGAGAGTTTGCTTATTCTTCCCCATGCCCACATGGTCTCGTGTTTATGTAAGCAGCTTCATGATGTGTACCAGCTCTTCTATCTTACTCGCTTTACCTTTATGTGAATATATCTTGTACTTATACTTTCTTGATTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTTGTAATTGTAGTATATTTGGGGTGCACAGAAATGCTTTGGTGTTCACCATGGCTAAACTGCTTTATCCCAGAGCTTAGAGTTAGAGCATGGCCATTTGCTACCTCGTTGCTCCATATTATATGCAAACAGAGTCAACATGGAGAAGGGAAACTATTACAATAATCTGCTAATGGAGTTTTTAATTCGCAATTAATGTCAGATGTAACTTTTCCATTCATACCTACGTTCAATCATTAAACTACCTGTTCTTCTTTTCTGACTGCTGAAACTTTCAATTCTTGTAAATAAGAGTCGAATGAATTCTACAGCACTACAAGGATGATCCTAGAAGTTATGGTCTCCAATTGGTTGACATGGATTATCTTCTCAATACAACATTAGAATTAGACAAATCAGGACTACAGGTACATGTTTTTCATTTGTACAGGCATGCTTAAATTTTGATTATCATCAATCCTGAAAGTTGAACCAATCTTTTTCTCAGATTGCCATACATGCAATTGGAGATAAAGCCAATGATATGCTACTCGATATGTATGAGAAGGTGGTTGATTTGAATGGAATGAAGGATCATAGATTCCGGGTATGTTCTTATAGTATAGCGTAACAGTTTTTTTTTCCTGTCCTCAGTCCTCACTCTTTTCAAAAAGTTAAATATGCTGAATGGAATTCGAACTGAAAGTTGTGTGCTAAATCAGATTGAGCATGCTCAACACCTTGCTCCCGGTGCAGCCAAGCGCTTTGGCAAACATGGTATTATTGCATCTGTGCAGGTCAAGTATCTCCTTCCACTGCTTTATCTTGTATACTCGCTATAGAAACAATTTTTTTTTTGTTACCTTATGACATTTTAATTGTTCGGTTGTTTATCATATAGCTGACGTCTTCAGTTAATTCAGGTAATGTTTGAGTAGAACGAGACTAAGTTAATAAATAGTTTGTTAAGAATTATTGGAAGTATTATTCCTACTTATATAAAGGATCCATTGATTGTACAAACTGTCTAACACTACTCCGACAAATATGGTTCCAAAAACTAAAAGTGAAACTTTCTAAAATATCATCTATTATGGCTGGGAAGTAATTTTACATTGCAACATTTTGTCCCGCTAGTTTACAAGTGTGGACGACAATCTTCATCTTCTGAAAGATTTGCTTATTGTTTGCCAGCCTGATCATATATTAGATGATGCCAATTCTGCTGGGAAGAAAATTGGGATAGAACGAGCTGAGCGAAGCTCCTATTCTTTTCGGTCACTATTAGATGGTGGTGCACATCTGGCTTTTGGTTCTGATTGGCCTGTATGTGTTTCCTGAAACTTCTGAATAAAATTTGGTTTTTATTTTGCAGGCTATAGATAATTAATTGTACACGTTTACAGGTTTCAGATATTAATCCATTACAAGCTATTCGAACTGCAGTATCCCGCAAACCTGCTGGATGGGAAGTCCCTTGGATCCCTGCGGAACGCTTATCTTTAGATGATTCTCTGAAAGCGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000099