BGIOSGA000111

From RiceWiki
Revision as of 10:00, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000111| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000111, complete gene.| tag = OsI_051...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000111

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000111, complete gene.

LocusTag

OsI_05193

Ensembl Transcript ID

BGIOSGA000111-TA

Ensembl Protein ID

BGIOSGA000111-PA

Length

4652

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:45808608..45813259

Sequence Coding Region

45812892..45813259,45812068..45812206,45811311..45811464,45811083..45811160,45809718..45809815
,45809469..45809631,45809339..45809395,45808835..45808896,45808608..45808754

Genome Context

<gbrowseImage1> name=IndicaChromosome01:45808608..45813259 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:45808608..45813259 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGCCACCTCGCCCGCCTCCTCAACAACCGCATCCTCCTCCCCGCCTCCTCCTCACCCGCGGCCGCCTTCTCCAAGCGTACCTACGCCCGCCGCACCAAGCCGGCTCCGCCGACCGCCGATGCGGCCGCCCCCGCCGCGGTGGAGGGGGAGGGGGAGGAGGAGAGGGGGCCGGGCTGGCAGAGGGAGAAGCTCCCCGCCGAGATCCCCCGGCCGTCCACCATCGCGTTCCAGCCGCGCGTCGCCAACGCCGTGCGCCTCGTCGGCACCGTCGGCGCGCCCGTGCAGCTGCAGCGGTTGCCCGACGGCCGGTTCTCCGCCGTCTCGGTGCTCGTGCAGGACCGCCACGCTGATTACCCCAAGTTCTGGATTCCCATAATATTCCAAGATGACTTGGCACAAGTTGCCGCGTCTCACTTGCAAGAGAAGGACCATATATATGTGTCTGGGCAACTAACTGGAGATATCCCACCGACCAAACTTATGGATGGCCAAGCAAACATTCAGGTTTTAGCCCAAATGCTATCATTTGTTGGTGGTAAAGCAGTTCAAGCAGATAGCATGGTGGATGAAGAGGAGGGATTTATGCAGATTGTTGAGGCTGAAAAGAAAGTTGAAACTAAAAAATTCATCCCTAAATATCCACCACGCACAGTTTCAGGGGCAATGGGCATGACTAACAAAGCAATTTCTTTCAGCCATGCACCTTTATTCACCTGTCCACCAGTTTCACAATATTGTTACAGAAACAAGGATAAGCTAAACAAACTCTGGAATGATGTTGTGGCTAATCCTCAAGACTGGACTGATAACCGACCTCAGAAGAAAAATGGATCTATAAATGCGAAGTATCCTGACTTCAAAAACAATGTATCAAAAGAGGCACTTTGGCTTGACACTGCACCAAAAGCAGTGCTGGAAAAGTTGGATGATTTAGTATTCAGTAGTGATTTCAGTGCTGCAAAAAAATACAGGCCTTTTGGTGGTGACAAGGGCAATGGTACAAACTGGGCAAAGAAGAGTCAAGATTCTTCTTCTATCTCAAAACAAAAACAAGGGGAGTTGTGGCAAGATCTGGTGGACAATCCTGGAAAATGGTGGGATAACCGATCAGATAAGCCTTCAATAAAATATCCTGATTTCAAGCACAAGGAAAATGGCACGCCTCTGTGGATTGGATCCCAGACACCTAAATGGGCTATAGATGCGCTTCCACCGGCAAAACCATCCAAGGCACCTTTTAAGCAAGAGACCTTCCTCTCATGA</cdnaseq>

Protein Sequence

<aaseq>MRHLARLLNNRILLPASSSPAAAFSKRTYARRTKPAPPTADAAAPAAVEGEGEEERGPGWQREKLPAEIPRPSTIAFQPRVANAVRLVGTVGAPVQLQRLPDGRFSAVSVLVQDRHADYPKFWIPIIFQDDLAQVAASHLQEKDHIYVSGQLTGDIPPTKLMDGQANIQVLAQMLSFVGGKAVQADSMVDEEEGFMQIVEAEKKVETKKFIPKYPPRTVSGAMGMTNKAISFSHAPLFTCPPVSQYCYRNKDKLNKLWNDVVANPQDWTDNRPQKKNGSINAKYPDFKNNVSKEALWLDTAPKAVLEKLDDLVFSSDFSAAKKYRPFGGDKGNGTNWAKKSQDSSSISKQKQGELWQDLVDNPGKWWDNRSDKPSIKYPDFKHKENGTPLWIGSQTPKWAIDALPPAKPSKAPFKQETFLS</aaseq>

Gene Sequence

<dnaseqindica>1..368#1054..1192#1796..1949#2100..2177#3445..3542#3629..3791#3865..3921#4364..4425#4506..4652#ATGCGCCACCTCGCCCGCCTCCTCAACAACCGCATCCTCCTCCCCGCCTCCTCCTCACCCGCGGCCGCCTTCTCCAAGCGTACCTACGCCCGCCGCACCAAGCCGGCTCCGCCGACCGCCGATGCGGCCGCCCCCGCCGCGGTGGAGGGGGAGGGGGAGGAGGAGAGGGGGCCGGGCTGGCAGAGGGAGAAGCTCCCCGCCGAGATCCCCCGGCCGTCCACCATCGCGTTCCAGCCGCGCGTCGCCAACGCCGTGCGCCTCGTCGGCACCGTCGGCGCGCCCGTGCAGCTGCAGCGGTTGCCCGACGGCCGGTTCTCCGCCGTCTCGGTGCTCGTGCAGGACCGCCACGCTGATTACCCCAAGTTCTGGTACGGCCATCGCTTCCCCTCCCTATATCTATCTATCTACGCACTGCGTCACTGTGATCGGTCGGTACTTGGCGGTGTTTGGGACTGAAGGAGGCTGAAAATGCTGTAGCACAAACCGCCTATGCCTTTTTGTTGCATGGTTTTGTGCCATTTGTTTCCCAGACGAAGTAAACTATGTGTAGAATTGGGGGTGAAATATGTAGAATGGGTAAAGTATTTTATTTCAGGACTGTTTGGTTTGTGTTTTGGTACCGTCAAACAGTTTGGTTTGGTATGATTGGCAAAGTTGCTGACATCAACTTTGGATGGAACGGAAAATATCAATATCTTCTAGTACCTCTTTGTTTTTTCCCTGCAAAATGCATTGATAGTGCATTTGCAGGGATTTATCGTAATAACAATTTCCTGGAAGACATTATCGGGCTAAATGTTTGGCAATGGAACATGGTCAACCTTTGTTGCTATTATATCAAGTCTAAAAATGCGCGCAAATTTTATCATCAGTGATGGCTAAACTTGATCACGCAGGTCCAGAAAGTTCCAGCGATCAGCACACAGTAGCCTTGCCTTGTTCCTAGTGTGTATTTGACTTGACATGTTCGATTCTATGGAAGGAAACACAATCGTTTGCAAGTTCAGTGTTCACTTTTCTTGGATACCTCCCTGACCGACTTTCCATTTTCAGGATTCCCATAATATTCCAAGATGACTTGGCACAAGTTGCCGCGTCTCACTTGCAAGAGAAGGACCATATATATGTGTCTGGGCAACTAACTGGAGATATCCCACCGACCAAACTTATGGATGGCCAAGCAAACATTCAGGTATGTAGCTACTGGACATTCTTTGTTGAATAATATTAGTGCCAGGAAATATAATGCTGTTCTTCTTCCGTATAACACATGATAGAAACTTCCTATTTGTCTCTTGTACTTGGCCATACTGAAACCTTTTCAGTTCATTCAATATTAGAAATGACATGTAATCAGATCAGACGATGTCTACTCTCTTTTATTCTTGTGTTCACAAGTTTACCTTTAACCAGCTACTACTTTGCTTTTGCATCTTGTGGTAACGAAAATACTACCAATTATATTATAAGTTGATAGAATAGACAATCTAATGCGAGATATGCTGCTCAGAAAGTCGAGTGGGTCTGTGGGCTATGTTGTGTATCATCTCTTCACAATATTCTTTTTGCTAACGTTGTTATTTTTTTTCTCTATTTAGTACTTTCATGAAGTCTTTCCTCAAACAGAAGAATAAATCTTGCAGCTCTTTTTTTTTTCCTCAATAGTGGATGGATTGTTTTAAAGTGAACAATTCTTATTTCCCCGCTTCTTTCTCTTGCATGATATAATTATGTTTCTTATTTTTTTTGTTTATATGATTGGCATAAAATATTTGTACTGATTAATATATTCCAGGTTTTAGCCCAAATGCTATCATTTGTTGGTGGTAAAGCAGTTCAAGCAGATAGCATGGTGGATGAAGAGGAGGGATTTATGCAGATTGTTGAGGCTGAAAAGAAAGTTGAAACTAAAAAATTCATCCCTAAATATCCACCACGCACAGTTTCAGGTGCTGTATTCACTCCCAACTAAATTCATCCCCCCTGCTTCATTATGTCTTAGTTTATCTTCGTCGCGTTGTACCACTGAGAAAATTGTAATAGTGCTTCATTATTGTTCACTATACTCTTGTTAGTTTATTTCTTTGGTTGTGAATTAGGGGCAATGGGCATGACTAACAAAGCAATTTCTTTCAGCCATGCACCTTTATTCACCTGTCCACCAGTTTCACAATATTGTGAGTCTAGTCAATGAATTTGGGCACCCTGACTAGTAAATTTGTTAGAGAACTGCACAATCGGTCATCCTTTTTTTTAATACCAAATTTTGACCCAAAACAGTAGGGGATCTTCCTTTTTCTACCATGCAGCTCGGATCAGGGATAAGCCACTCTTTTCACTTTGGACCAGATGTGTTTACAAAATGTTCCCCTTCGGACCAGTTCTTCCTCTGGCTCTCCTCTTTTCTGTCACCCGCAACCTTGCTGCTCCAGTGAGCTGGCCCCCATACTCAAGCATGAGCTTGTGACTATCAAGAAGCAGAGGAAAAAATGGGGATGGCAAAGAAGTGAACCTATTGTAATAGCGTGTGGTGTCGGCGCTGCTGGAGCTCACTGCACATTAGTGTGAGGGCAGGGGAGAGCGTACTTACCAACATGGAAATCTCAATATAGAAGGGAAGAGAGTGGAGGTCGGACAGCTAGAGGAAGAACAGGTCGAATATTTTTCAAAGATCTCTGGTCCAAAGTGATGTGCTGCTTACCCTGGTCCAAGCTGCAAGATTGGTAAAAAAGGGTGCTCCAATGTGCATTTACTCAATTTTTAATCTGTATCTGTTATTTTCTGAATGAAACTTGCAAACATTAGTAGTTTTAACTATTTTTTGTAGGGTAAATTGTTTAGGTCTATCTTGACACTTAAACTCAAACTGAAGGAAACCTTTTTAGACAACTTTTGTGATGCAAAAGTTGGTGTGCTTGAAATTTTGAGCAGTTGCTCATCAGTACTGAATACTGATTCACACACAGAGTTTAACTAGTGTTACAAAGAATGCAAGACTTTAGGGTTTATTCGGTTTGGAGGAAATTTCAAATCATAGGAATAGGAGAAGTGGAGGAATAGGAATGCATGAACACACCAATACATAGGAGTTTTTCCAAGAGTTTTGAGTGGATGGAAAATTTCGTATGTTTTCTCTCTACAACTTGTAGGAAAGGAAAAATTTCCTTTGGTTTTCCTATACTTACATTCCTACAAACCGAATGACACTCATAGGAATTAATACTTAGGATCCAATACTTTTGTTTTCCTCCAAACGAGCAAGTCCTTACAACTCACACCAACAATGTATGAACCCCAGTATATACAGACAACATATTGATTGCACTTTTATAGTACACAAGAGGGACATATAGTAAAGATTTCTTATATTCAATTTTTTTCAGCTATGCTTTCCATTGTAAATGAAACTTTTTGCTGTTTTTTATGTTTAATTATATTTCGCAGGTTACAGAAACAAGGATAAGCTAAACAAACTCTGGAATGATGTTGTGGCTAATCCTCAAGACTGGACTGATAACCGACCTCAGAAGAAAAATGGATCTGTGAGCATATTATTCATAAAGTTTGCTTTTGGTGAAATACGGCCTGTCAGCTACTACAACTCTCACCACTTCTCCTTTAAACACAGATAAATGCGAAGTATCCTGACTTCAAAAACAATGTATCAAAAGAGGCACTTTGGCTTGACACTGCACCAAAAGCAGTGCTGGAAAAGTTGGATGATTTAGTATTCAGTAGTGATTTCAGTGCTGCAAAAAAATACAGGCCTTTTGGTGGTGACAAGGGCAATGGTAAAAATTTAACCGTTTGACTTTCACGTCATCTATTTTTATTTCTGGATAGTACTACAAATAGCCTGTACAGGTACAAACTGGGCAAAGAAGAGTCAAGATTCTTCTTCTATCTCAAAACAAAAACAAGGTTTGTATAAGAATTGTTCGTTGTTCACTGGAAGTATTTTACCATATGATGAACACAATAATTGTTTCTGGTCAATCCTTTACATAAGTACCCACTTTCATAATTTGTCCTCGTAAATAAACTGCTCAGTGTCATCTGTTTATATTGCTATTCTGCTTGAGCTCTCATTGAGTCTCCAAGGCATTAACACTTCTCTGCAAACTATTCTGTTCAAGTGCCTGAAATATGTACGAAGATTAATGTATTTTTGCTGTTTTTTATACTCGATAGCTGTATATTTGGTTATCTGTTATACTGCATAATGTAGGATAATATCATGTTTGTCTGCTTCAATTAGTGTTTATGATGTTTTTCTTATCAATATAAACCTTTTTCCCTACAGCAGAAGTTGATTATTTGCATGCAACCTACCTTTTGTGATGGTGTATTGTTTTGTTTCCAGGGGAGTTGTGGCAAGATCTGGTGGACAATCCTGGAAAATGGTGGGATAACCGATCAGATAAGGTGAGTCTCAAAAAACTCGTTTTATGTTTATTATTCCCAGATTGGTGCTAAACATTGCAGATATCTGGTTTGACATGCAGCCTTCAATAAAATATCCTGATTTCAAGCACAAGGAAAATGGCACGCCTCTGTGGATTGGATCCCAGACACCTAAATGGGCTATAGATGCGCTTCCACCGGCAAAACCATCCAAGGCACCTTTTAAGCAAGAGACCTTCCTCTCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000111