BGIOSGA000140

From RiceWiki
Revision as of 10:00, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000140| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000140, complete gene.| tag = P0432C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000140

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000140, complete gene.

LocusTag

P0432C03.25-1

Ensembl Transcript ID

BGIOSGA000140-TA

Ensembl Protein ID

BGIOSGA000140-PA

Length

1621

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:45416624..45418244

Sequence Coding Region

45417974..45418244,45417676..45417900,45417244..45417508,45416986..45417160,45416624..45416836

Genome Context

<gbrowseImage1> name=IndicaChromosome01:45416624..45418244 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:45416624..45418244 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGGTGCTGGCGTCGCCTGGCGGCGGCCGGCGCACTGCTCGCCGCCCTCTGCGCCGCGCTTGCTCTGGCGGTGGCGGAGCACCGGCGCCCTGACACCACGGCCAGCAGCAGCAGCCGCCGGCCGCTGCGGTTCGCGTCGGGAGGAGGGTTCAAGGTGGCGCTCTTCGCCGACCTGCATTACGGCGAGAACGCCTGGACGGACTGGGGCCCACGGCAGGACGCCGGCTCCGACCGCGTCATGGCCGCCGTCCTCGACGCCGAGAAGCCCGACTTCGTGGTGTACCTCGGCGACCTCGTGACCGCGAACAATCTAGGGATCCCCAACGCGAGCCTGTACTGGGACAGAGCGATTTCTCCGACCAGAGGCAGGGGGATCCCGTGGGCGACGGTGTTCGGGAACCACGACGACATGCCGTTCGAGTGGCCTCCTGAGTGGTTCTCTCCTGCAGGCGTTCCGCCGCTGCATTGCCCACCACCGAGCATGTCAGATTCAGACTGCAGCTTCCGAGGAACACCGCGACTTGAACTGATGACAAGTGAGGTTATCCGTAATGGATTGTCATATTCATCAAATGGCCCCAAGGACCTCTGGCCTGCTGTTTCCAACTACGTCTTGCAGGTGCTATCACAGAAGCGAGATGATCCAGCTCTGCTCATGTATTTCCTTGACTCCGGTGGTGGATCCTATCCAGAAGTGATATCCAGTGCTCAGGTTCAGTGGTTTCATAGTCAATCTCAGTTCCTTAATCCAAATGGAAGGATTCCAGAGATAATCTTTTGGCATATTCCAAGTACGGCATATGCCAAGGTTGCGCCGAAAGCTAAGTCCGAAATAAGAAAACCCTGTGTTGGCTCTATCAACAGGGAAGAAGTAGCACCACAAGAAGCTGAATGGGGTATGATGGATGCCCTTGTCAAGAGGGCTTCAGTGAAGGCAATTTTCGTTGGTCACAACCACGGCCTGGATTGGTGCTGCCCACACGAGAAACTCTGGCTATGTTTTGCCCGACACACAGGCTATGGTGGCTACGGTAACTGGCCAAGAGGAGCAAGGGTTATTGAGATATCTGAACAGCCCTTCTCAATTCAGTCATGGATACGGATGGAGGATGGGACAACGCACAGCGATATTAGCTTGAGCTCCTAG</cdnaseq>

Protein Sequence

<aaseq>MRCWRRLAAAGALLAALCAALALAVAEHRRPDTTASSSSRRPLRFASGGGFKVALFADLHYGENAWTDWGPRQDAGSDRVMAAVLDAEKPDFVVYLGDLVTANNLGIPNASLYWDRAISPTRGRGIPWATVFGNHDDMPFEWPPEWFSPAGVPPLHCPPPSMSDSDCSFRGTPRLELMTSEVIRNGLSYSSNGPKDLWPAVSNYVLQVLSQKRDDPALLMYFLDSGGGSYPEVISSAQVQWFHSQSQFLNPNGRIPEIIFWHIPSTAYAKVAPKAKSEIRKPCVGSINREEVAPQEAEWGMMDALVKRASVKAIFVGHNHGLDWCCPHEKLWLCFARHTGYGGYGNWPRGARVIEISEQPFSIQSWIRMEDGTTHSDISLSS</aaseq>

Gene Sequence

<dnaseqindica>1..271#345..569#737..1001#1085..1259#1409..1621#ATGCGGTGCTGGCGTCGCCTGGCGGCGGCCGGCGCACTGCTCGCCGCCCTCTGCGCCGCGCTTGCTCTGGCGGTGGCGGAGCACCGGCGCCCTGACACCACGGCCAGCAGCAGCAGCCGCCGGCCGCTGCGGTTCGCGTCGGGAGGAGGGTTCAAGGTGGCGCTCTTCGCCGACCTGCATTACGGCGAGAACGCCTGGACGGACTGGGGCCCACGGCAGGACGCCGGCTCCGACCGCGTCATGGCCGCCGTCCTCGACGCCGAGAAGCCCGGTGCGTGCGGCGTCCCCTCGCCTGAAATGTAAAATTGCGAGTTCTTTTCGCTGAAATCTCCCGGAATTCGCAGACTTCGTGGTGTACCTCGGCGACCTCGTGACCGCGAACAATCTAGGGATCCCCAACGCGAGCCTGTACTGGGACAGAGCGATTTCTCCGACCAGAGGCAGGGGGATCCCGTGGGCGACGGTGTTCGGGAACCACGACGACATGCCGTTCGAGTGGCCTCCTGAGTGGTTCTCTCCTGCAGGCGTTCCGCCGCTGCATTGCCCACCACCGAGCATGTCAGATTCAGGTAAACTTAAGATAGTTCATTTCTGAATTTGTTTCAGTTCAGTCACTGAACTTCAGCGCAGAAAAAAGAAAAGGAAAAGAAAGAAGGCAACCACTGTATGCTTTCAAACAAAAGTAATCATTCATTTGAACTTTTCAAGAAAACCATGTTTTTAACTTGATGTGCAGACTGCAGCTTCCGAGGAACACCGCGACTTGAACTGATGACAAGTGAGGTTATCCGTAATGGATTGTCATATTCATCAAATGGCCCCAAGGACCTCTGGCCTGCTGTTTCCAACTACGTCTTGCAGGTGCTATCACAGAAGCGAGATGATCCAGCTCTGCTCATGTATTTCCTTGACTCCGGTGGTGGATCCTATCCAGAAGTGATATCCAGTGCTCAGGTTCAGTGGTTTCATAGTCAATCTCAGTTCCTTAATCCAAATGGAAGGTCAGAAACTTGTATCAATTTTGCACATACTCAAAATTCAAGCTTCTGCAACTCAAAATTAATGTTGTGTAATTATTCTACAGGATTCCAGAGATAATCTTTTGGCATATTCCAAGTACGGCATATGCCAAGGTTGCGCCGAAAGCTAAGTCCGAAATAAGAAAACCCTGTGTTGGCTCTATCAACAGGGAAGAAGTAGCACCACAAGAAGCTGAATGGGGTATGATGGATGCCCTTGTCAAGAGGGCTTCAGTGAAGGTTTGTTTCATCTGAACATTTCTTGACATGTATACAGAATTTCTTATCCCCTGAATCCCTTCAGATAACTTAGATACACAGGTCAAAATTCAGAAGACACTTACTTTTTATTTGTTAGAGAACATATATCATTGGTTGTCATTTTACAGGCAATTTTCGTTGGTCACAACCACGGCCTGGATTGGTGCTGCCCACACGAGAAACTCTGGCTATGTTTTGCCCGACACACAGGCTATGGTGGCTACGGTAACTGGCCAAGAGGAGCAAGGGTTATTGAGATATCTGAACAGCCCTTCTCAATTCAGTCATGGATACGGATGGAGGATGGGACAACGCACAGCGATATTAGCTTGAGCTCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000140