BGIOSGA000158

From RiceWiki
Revision as of 10:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000158| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000158, complete gene.| tag = OsI_051...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000158

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000158, complete gene.

LocusTag

OsI_05108

Ensembl Transcript ID

BGIOSGA000158-TA

Ensembl Protein ID

BGIOSGA000158-PA

Length

1145

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:45086921..45088065

Sequence Coding Region

45087995..45088065,45086921..45087959

Genome Context

<gbrowseImage1> name=IndicaChromosome01:45086921..45088065 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:45086921..45088065 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCCACCGATCGCCGCCGCCCGACGCCGTCCAAGCCCATCGTGGCGCGCCTCGGCAAGGACGCCGCCGCTCGTCGTCGACCTCGCCGGCCCGCTGCTCTGGTCGACGTGCCCGCCCGCGCACCGCACGGTCCCATGCAGCTCCAGCGTGTGCAAGGTGGCGAACTGGTACCGGTCTCCGGCCAGCTGCCCGTACTCCGACGGCGGCCGGCCGGGCTCCGGCGACAGGGGGTGCGCCTGCGCCGCGTACCCGTACAACCCGGTGAGTGGGCAGTGCGGACGCGGGGACGTCGCCGCCGTGCCGCTCGCCGCGAACGCCACGGACGGCAAGAACCCGCTGTTCCCGGTGTCGTTCTCGGCGTTCGCGTCGTGCGCGCCCAGCGGGCTCCTGGCGTCGCTCCCGTCGGGTGTCGCCGGCGTCGCGGGGATGTCGAGGCTGCCGCTGTCGCTGCCGTCCCAGGTGGCGTCGTCGCTGAAGGTGGAGAGGCAGTTCGCGCTGTGCCTTCCGGCCAGCGGCGGCGGCGGCGACGGCGCGGCCATCTTCGGCGGCGGGCCGTTCCAGCTCCTAGCGGCGCCGCCCATGGAGATCACCGAAGGTCTCCGCCGCAACCCCGTGCCCCTCCTCAAGAACCCCAAGAATGGCGCCTACTACCTCCGCGTCACCGGCATCGCCGTCAACCTCGAGGCGGTGCCCATCCCGCCCCGCGCGCTCGACCTCGACGTCCGCCGTGGCACGGGCGGCGTCACGCTGAGCACCGTCGCGTCGTACACCACGCTCCGGCCCGACGTCTACCGCGCGCTGCTCGGGGCGTTCGACGCGGCCACGTCGGGTATCCCACGCGCGGCGGCGGTGAGGCCGTTCGAGACGTGCTACCGGGCGTCCGCGCTCGGCACGACGCGGCTCGGCTTCGCCGTGGCGAACATCGACCTGGTGCTGGGCGGCGGCCGGAACTGGACGCTCCCCGGCGGCAGCTCGCTGGTGCAGGTGGACGAACAGACGGTGTGCTTCGCGTTCCTCGAGATGATGGGGACCTCGCCGGCGGCGGCCGACTCGCCGGCGATTGTCATCGGAGGTTTCCAGATGGAGAACAATCTGCTGCTGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MAATDRRRPTPSKPIVARLGKDAAARRRPRRPAALVDVPARAPHGPMQLQRVQGGELVPVSGQLPVLRRRPAGLRRQGVRLRRVPVQPGEWAVRTRGRRRRAARRERHGRQEPAVPGVVLGVRVVRAQRAPGVAPVGCRRRRGDVEAAAVAAVPGGVVAEGGEAVRAVPSGQRRRRRRRGHLRRRAVPAPSGAAHGDHRRSPPQPRAPPQEPQEWRLLPPRHRHRRQPRGGAHPAPRARPRRPPWHGRRHAEHRRVVHHAPARRLPRAARGVRRGHVGYPTRGGGEAVRDVLPGVRARHDAARLRRGEHRPGAGRRPELDAPRRQLAGAGGRTDGVLRVPRDDGDLAGGGRLAGDCHRRFPDGEQSAAV</aaseq>

Gene Sequence

<dnaseqindica>1..71#107..1145#ATGGCGGCCACCGATCGCCGCCGCCCGACGCCGTCCAAGCCCATCGTGGCGCGCCTCGGCAAGGACGCCGCCACCTCGCTGTACACCGTCTCGGTCGGCGGCGCGCCGCTCGTCGTCGACCTCGCCGGCCCGCTGCTCTGGTCGACGTGCCCGCCCGCGCACCGCACGGTCCCATGCAGCTCCAGCGTGTGCAAGGTGGCGAACTGGTACCGGTCTCCGGCCAGCTGCCCGTACTCCGACGGCGGCCGGCCGGGCTCCGGCGACAGGGGGTGCGCCTGCGCCGCGTACCCGTACAACCCGGTGAGTGGGCAGTGCGGACGCGGGGACGTCGCCGCCGTGCCGCTCGCCGCGAACGCCACGGACGGCAAGAACCCGCTGTTCCCGGTGTCGTTCTCGGCGTTCGCGTCGTGCGCGCCCAGCGGGCTCCTGGCGTCGCTCCCGTCGGGTGTCGCCGGCGTCGCGGGGATGTCGAGGCTGCCGCTGTCGCTGCCGTCCCAGGTGGCGTCGTCGCTGAAGGTGGAGAGGCAGTTCGCGCTGTGCCTTCCGGCCAGCGGCGGCGGCGGCGACGGCGCGGCCATCTTCGGCGGCGGGCCGTTCCAGCTCCTAGCGGCGCCGCCCATGGAGATCACCGAAGGTCTCCGCCGCAACCCCGTGCCCCTCCTCAAGAACCCCAAGAATGGCGCCTACTACCTCCGCGTCACCGGCATCGCCGTCAACCTCGAGGCGGTGCCCATCCCGCCCCGCGCGCTCGACCTCGACGTCCGCCGTGGCACGGGCGGCGTCACGCTGAGCACCGTCGCGTCGTACACCACGCTCCGGCCCGACGTCTACCGCGCGCTGCTCGGGGCGTTCGACGCGGCCACGTCGGGTATCCCACGCGCGGCGGCGGTGAGGCCGTTCGAGACGTGCTACCGGGCGTCCGCGCTCGGCACGACGCGGCTCGGCTTCGCCGTGGCGAACATCGACCTGGTGCTGGGCGGCGGCCGGAACTGGACGCTCCCCGGCGGCAGCTCGCTGGTGCAGGTGGACGAACAGACGGTGTGCTTCGCGTTCCTCGAGATGATGGGGACCTCGCCGGCGGCGGCCGACTCGCCGGCGATTGTCATCGGAGGTTTCCAGATGGAGAACAATCTGCTGCTGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000158