BGIOSGA000160

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Revision as of 10:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000160| Description = BGIOSGA000160| Definition = Oryza sativa Indica Group BGIOSGA000160, complete gene.| tag = | tid = BGIOSGA000160-TA|...")
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Gene Name

BGIOSGA000160

Description

BGIOSGA000160

Definition

Oryza sativa Indica Group BGIOSGA000160, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA000160-TA

Ensembl Protein ID

BGIOSGA000160-PA

Length

2689

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:45075486..45078174

Sequence Coding Region

45078126..45078174,45076842..45076912,45076225..45076306,45075486..45076051

Genome Context

<gbrowseImage1> name=IndicaChromosome01:45075486..45078174 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:45075486..45078174 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCCAGGACCTCGCCGAGATCCACCCTCGCGAGCTCCAGTTCACCTTTGAGGTGAAGAAGCAAAGTTCATGTACTGTCCATCTTGTCAACAAATCCAATGAATATGTCGCATTCAAGGTTAAAACAACATCACCTAAAAGGTATTGTGTTCGACCAAACACTGGAGTCATCCTTCCAAGGTCAACATGTGATTTCACAGTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGTGCCCATCCCGCCCCGCGCGCTCGACCTCGACGTCCGCCGTGGCACGGGCGGCGTCACGCTGAGCACCGTCGCGTCGTACACCACGCTCCGGCCCGACGTCTACCGCGCGCTGCTCGGGGCGTTCGACGCGGCCACGTCGGGTATCCCACGCGCGGCGGCGGTGAGGCCGTTCGAGACGTGCTACCGGGCGTCCGCGCTCGGCACGACGCGGCTCGGCTTCGCCGTGGCGAACATCGACCTGGTGCTGGGCGGCGGCCGGAACTGGACGCTCCCCGGCGGCAGCTCGCTGGTGCAGGTGGACGAACAGACGGTGTGCTTCGCGTTCCTCGAGATGATGGGGACCTCGCCGGCGGCGGCCGACTCGCCGGCGATTGTCATCGGAGGTTTCCAGATGGAGAACAATCTGCTGCTGTTTGATCTGGAGAAGGGGACGCTGGGGATCAGTTCGCTGCTGTCCGGACTCCGTACCGGGTGCGGCGCCTTCAACTTCACCATGGGAAGTTCTTAA</cdnaseq>

Protein Sequence

<aaseq>MGQDLAEIHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGVILPRSTCDFTVXXXXXXXXXXXXXXXXXXVPIPPRALDLDVRRGTGGVTLSTVASYTTLRPDVYRALLGAFDAATSGIPRAAAVRPFETCYRASALGTTRLGFAVANIDLVLGGGRNWTLPGGSSLVQVDEQTVCFAFLEMMGTSPAAADSPAIVIGGFQMENNLLLFDLEKGTLGISSLLSGLRTGCGAFNFTMGSS</aaseq>

Gene Sequence

<dnaseqindica>1..49#1263..1333#1869..1950#2124..2689#ATGGGCCAGGACCTCGCCGAGATCCACCCTCGCGAGCTCCAGTTCACCTGTAAGTCCCCCCCGCTGCCACGCCACCGCCACGGCGCCACGCCTCACCACCCCCTAGATAGAGAGTGGAGTAGAGAGTAATTCCGATCCGTCTCGCGTTAACGGGCGAATCAACTTCAATCGAGTGGATTCCGTGTATGTGTGTCGTGGTGTGCGACTTCCCTGCCTGTTTCTTCGCTTCGCTGTAGTATTACTTTGTATCGTGCCGGGTATTTTCGCCCTCAGTGGAGTTTAATTTGTAGCCTCTGTTGATTGGAATTGGTTCCAGTATTAGTGTTCCAAAACTATTTCCCCTCGTTTGGACTGATCAACAGGTTTAAGGGTCTTAGCGATTTTCATTTCAAATTAGTGGGAATTTTCGTTCCACTCTGGTTTCTATTTTTTTCATTTCTTAGTGGTTTTGATTTTCGTTTCACTGTCATTTTTTAATTTTTCTTGTCTGAATGGTTTTGATTCTGTTTAGAGGTGTAGGTACTTGCAGAATTTTTTTTGTTAGATTATTACAGTGTTAAGTGAAGAAGCAATGAGTGATTTTGTTTTTACTGTTAACTTTTCTCTAGGTTACTTAGATAACATTCTACAAACATGGCTCCGGAGTTTGGAATTATCTGTAAACTTTTGTTTTGGAATTTTTTAAAGGCTGCTTTTTTAGTGGGCTGCTCCTTTTTCTGTTCGTTTGGTTACTGACAGGTCGATTTTGTGGTGCGAGTGGTTGTAAAGTCTGATGTCTGTGTGTGGGAGAGGGATCTGATTGCTTGTCTAATTGGCTTACCTGGATTGGATGCGGTTGCAGTAACTACTGAGAATGGACTGATACAGCGATGCACATGCTAACAATCATAAAAGGAGGGAGTGGTGGTGTTAGTTTTTACCTTTTAGTCATGCATCACTCAAAAGATCATCATGTGCTGATAAAAGAGGAAGGGGAGTGAAACTGAAAATTATCGTATCCTAGTTCTGCAGGTGGTTTTCTTATGAACTGTGCAATTTAGAGTACTTGTCAAATTTGCACATGATTAAATTGGTCTTTGCAATTTTCATTGGATGAACAAGACGGTCTCGTACTGGTTCCTACCACACCTGTATTTGAAACTACAACATTCAGCCATATAATTGAAATGTGTTTAACTGCTGTACAGTATAGGATACAAAACACATTCCGTCTCAAAGTTTTGAATGATAATCTGACTTGGTATCTCATTTATTATTGGCAGTTGAGGTGAAGAAGCAAAGTTCATGTACTGTCCATCTTGTCAACAAATCCAATGAATATGTCGCATTCAAGGTTTGTCAGTGCTCTCAAAGACAAATTCAAATGCCGCTTGTTTTTATGTTAAGTATAGCTCCTGATGGTGTACTGTGTACATTGTGCTATCTAAACATTGTGTATCCTTTCCTAGGTAATTGTAACCATGAAGTTGTCCATCAGTACTATTATTTTGAATGCGGCTATGGCCTTAATTCTTGAATACCAAATGGGCATATCAAAGAATACATATTAATTTGTCTGCTACTACATACAACTACTTTTATTTTTCTAAATTTAAATGTCTTTTTATGGTATTGTACAAGAATTATATAGTGATGCTAGATACATATTTATATGGTAACCTAACGAGAAGGCTGGAAAATTGTATTTTTAATGCAAGGTATTTCCTATTGTTTTTAAATGCCATTTCTGATGACACTAAACTTAGATATTTTGTTTTCTGAATATTATGTATTCTTTAATCGCTTTTATGCTCAATCAAAGGATGATAATTTTTGCCGTTTGAGCATCTAATAGGACTATGTCTGATATTGCCCTTCAAATTTGTTAGGTTAAAACAACATCACCTAAAAGGTATTGTGTTCGACCAAACACTGGAGTCATCCTTCCAAGGTCAACATGTGATTTCACAGGTATGTTCAGTAGCTCACTACTGCATTTACTCACTGGCAATATTGTTTTGTGTATGCAAGGATTATTGCACCGGAGATATATTTACTTACCTTGTTGATCTATATTAGCATATACTCCCTCCGTTTCGCCTTATAAGACATTTTGACTTTGGTCAAAGTCAAACTGCTTTAAGTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGTGCCCATCCCGCCCCGCGCGCTCGACCTCGACGTCCGCCGTGGCACGGGCGGCGTCACGCTGAGCACCGTCGCGTCGTACACCACGCTCCGGCCCGACGTCTACCGCGCGCTGCTCGGGGCGTTCGACGCGGCCACGTCGGGTATCCCACGCGCGGCGGCGGTGAGGCCGTTCGAGACGTGCTACCGGGCGTCCGCGCTCGGCACGACGCGGCTCGGCTTCGCCGTGGCGAACATCGACCTGGTGCTGGGCGGCGGCCGGAACTGGACGCTCCCCGGCGGCAGCTCGCTGGTGCAGGTGGACGAACAGACGGTGTGCTTCGCGTTCCTCGAGATGATGGGGACCTCGCCGGCGGCGGCCGACTCGCCGGCGATTGTCATCGGAGGTTTCCAGATGGAGAACAATCTGCTGCTGTTTGATCTGGAGAAGGGGACGCTGGGGATCAGTTCGCTGCTGTCCGGACTCCGTACCGGGTGCGGCGCCTTCAACTTCACCATGGGAAGTTCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000160