BGIOSGA000166

From RiceWiki
Revision as of 10:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000166| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000166, complete gene.| tag = P0492G0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000166

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000166, complete gene.

LocusTag

P0492G09.28

Ensembl Transcript ID

BGIOSGA000166-TA

Ensembl Protein ID

BGIOSGA000166-PA

Length

2113

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:45023543..45025655

Sequence Coding Region

45025502..45025655,45025158..45025378,45024686..45024812,45024521..45024595,45024240..45024432
,45023933..45024065,45023543..45023794

Genome Context

<gbrowseImage1> name=IndicaChromosome01:45023543..45025655 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:45023543..45025655 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATTGCCAACCGCGGTGGTAGCCGGCATTGCCGCCGCCGTCGCCACGCTGCTGGTGGCCGCCGCCGTGGCCGCGGCGTGGTGGTGGCGCGTGGCGCGTCGTAGCCGCCGGAACTCCGACACCGGCTCGTCGGAGACCCCTCCTACACTAGTGGAGTGGGGCAGGTGTGGGCGGACGTTGTCGGCGCCGGAGTACCAGGGGGCGAGGCAATTCTCGCTGGAGGAGCTCGCGCACGCCACCAAGAACTTCAGCGACGCCAACCTCGTCGGCGCCGGCAGCTTCGGCCCGGTCTACAAGGGCCTCCTGCTCGACGGCACCGTCGTCGCCGTCAAGCGCCGCGTCGCCTCGCCGCGCCAGGACTTCGTCGACGAGGTCAAGCGGCTATCAGAAATCTGGCATAGAAACGTTGTCACTCTCATCGGCTACTGCCAAGAAGGAGGTCTACAAATGCTTGTGTTCGAGTACCTGCCCAATGGCAGTGTCTGTGGCCATCTGTACGCAGACACCGGCAAAGAGTCAATGACAAGACTAGAGTTCAAGCAGAGGCTCTCAATAGCAATTGGAGCGGCCAAAGGTCTGAATCATCTGCACAGCCTCGTGCCTCCTTTGATCCACAAGGGCTTCAAGACGAGCAATGTTTTGGTCGATGAGAACTTCATCGCGAAGGTGGCTGACGCCGGAATCGACAGGCTGCTCAGAGGATTCGACGGCGCCGCGCCGTCGCATCATCCGTCGTCGTCTTGCAGCAGCATCTACCAAGACCCAGAGGTGCATTCCTTGGCGCAGCTTTCTGAAAGCAGCGACGTGTACAGCTTTGGGGTTTTTCTTTTGGAGCTCATCACTGGCAAAGAAGCAGCGAGCCTGATTTCTTCAGAACCAAGAGAACCTCTGGTTCATTGGATGGAGTCACATTTCAGTTCGAACAACGAGGTGACGGATCCAAGGCTGGGAGGCAGCTTCACGTCGGAGGGGATGAAGGAGCTGGTCGGGCTGACGTTGCAGTGCGTCAGCACGTCGGCGAGACGGCGGCCGAAGATGCGGCTGATCGCGGCGGAGCTCGACCGGATTCTGGAGAAGGAGATGAGCCTCACCACCGTCATGGGCGACGGCACCGCCATTGTCACGCTCGGTAGCCAGCTCTTCACGTCCTGA</cdnaseq>

Protein Sequence

<aaseq>MALPTAVVAGIAAAVATLLVAAAVAAAWWWRVARRSRRNSDTGSSETPPTLVEWGRCGRTLSAPEYQGARQFSLEELAHATKNFSDANLVGAGSFGPVYKGLLLDGTVVAVKRRVASPRQDFVDEVKRLSEIWHRNVVTLIGYCQEGGLQMLVFEYLPNGSVCGHLYADTGKESMTRLEFKQRLSIAIGAAKGLNHLHSLVPPLIHKGFKTSNVLVDENFIAKVADAGIDRLLRGFDGAAPSHHPSSSCSSIYQDPEVHSLAQLSESSDVYSFGVFLLELITGKEAASLISSEPREPLVHWMESHFSSNNEVTDPRLGGSFTSEGMKELVGLTLQCVSTSARRRPKMRLIAAELDRILEKEMSLTTVMGDGTAIVTLGSQLFTS</aaseq>

Gene Sequence

<dnaseqindica>1..154#278..498#844..970#1061..1135#1224..1416#1591..1723#1862..2113#ATGGCATTGCCAACCGCGGTGGTAGCCGGCATTGCCGCCGCCGTCGCCACGCTGCTGGTGGCCGCCGCCGTGGCCGCGGCGTGGTGGTGGCGCGTGGCGCGTCGTAGCCGCCGGAACTCCGACACCGGCTCGTCGGAGACCCCTCCTACACTAGGTATACGTCCATATATAGCAATAATCACAACTTGATCACATCGAGTTTGGTCTCCAAATTTAATTATTCGCAGCAGCATCGATCGATCTGTAGCTGATTATTAGCTTGGTGATGATTGGGCAGTGGAGTGGGGCAGGTGTGGGCGGACGTTGTCGGCGCCGGAGTACCAGGGGGCGAGGCAATTCTCGCTGGAGGAGCTCGCGCACGCCACCAAGAACTTCAGCGACGCCAACCTCGTCGGCGCCGGCAGCTTCGGCCCGGTCTACAAGGGCCTCCTGCTCGACGGCACCGTCGTCGCCGTCAAGCGCCGCGTCGCCTCGCCGCGCCAGGACTTCGTCGACGAGGTACACGCAAACTCTGCCTCATCAAAAATCATATACTTGTGCTGACGTCACGTCATCACTGCATTGCGTCATATGAGTCATAATCTCATTGACATTTCAGTTGGTGATCAGTACACTTGTTCCTGAAAATTGCTCTTTAATTGTTGTCACTTGTCAGTGTCACATTCCATTTTATTAGTTGCATTGAGTTGTTGATCACAGATAAGCCAGTGAATGCCTCTGTAACTTTTCTTTATTATTCTTAGAAATAGCCTCTCTGATTGTATGATAATTGTAAAAATTTGTAACTGAGTGAATTCACTCTCATTTTTTGACAAAGAAAAATGAATTCGCTCTGAATTTCAGGTCAAGCGGCTATCAGAAATCTGGCATAGAAACGTTGTCACTCTCATCGGCTACTGCCAAGAAGGAGGTCTACAAATGCTTGTGTTCGAGTACCTGCCCAATGGCAGTGTCTGTGGCCATCTGTACGGTAATATAACAAAGTTGATGATTCCTGTCAAATTCGAAGCCCAATTTGCTTGAAATTTGTTTCAAACAATAATGATCTTACACTGTTTAGCAGACACCGGCAAAGAGTCAATGACAAGACTAGAGTTCAAGCAGAGGCTCTCAATAGCAATTGGAGCGGCCAAAGGTGACAAAACATTTCAATTTTCATGTGCAGTGTTTCCTCATCAAACCAAAGTGTACAACACAGTGTCTGAAACTACGAAAATTTTCAGGTCTGAATCATCTGCACAGCCTCGTGCCTCCTTTGATCCACAAGGGCTTCAAGACGAGCAATGTTTTGGTCGATGAGAACTTCATCGCGAAGGTGGCTGACGCCGGAATCGACAGGCTGCTCAGAGGATTCGACGGCGCCGCGCCGTCGCATCATCCGTCGTCGTCTTGCAGCAGCATCTACCAAGACCCAGAGTAAGCCTGAACATTGTGCCGTTTTAACTGAACTTTTGCCTCTGAAATTATCAGAAGTATGAGCTGCAACTACATTGTGCAGAGCTGTAAAAATGTTAGCACTGCTTTCTGTAATTCACCAATATTTTTGTCTTACCATCATTTATATTTTGATGGGCTATTTTTTTCTCTCAGGGTGCATTCCTTGGCGCAGCTTTCTGAAAGCAGCGACGTGTACAGCTTTGGGGTTTTTCTTTTGGAGCTCATCACTGGCAAAGAAGCAGCGAGCCTGATTTCTTCAGAACCAAGAGAACCTCTGGTTCATTGGGTAATGCATATATTCAGCATTTCTTTTAGCAATTCATTTATTCAGTATGATTCATCCAAATATTAATTAATGTACAATCTTCCAAGTAAATTTCATCCAGAAACAGATATTCATTTTTTTCTTGTGAAATTTTGTCAGATGGAGTCACATTTCAGTTCGAACAACGAGGTGACGGATCCAAGGCTGGGAGGCAGCTTCACGTCGGAGGGGATGAAGGAGCTGGTCGGGCTGACGTTGCAGTGCGTCAGCACGTCGGCGAGACGGCGGCCGAAGATGCGGCTGATCGCGGCGGAGCTCGACCGGATTCTGGAGAAGGAGATGAGCCTCACCACCGTCATGGGCGACGGCACCGCCATTGTCACGCTCGGTAGCCAGCTCTTCACGTCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000166