BGIOSGA000177

From RiceWiki
Revision as of 10:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000177| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000177, complete gene.| tag = P0423A1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000177

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000177, complete gene.

LocusTag

P0423A12.30

Ensembl Transcript ID

BGIOSGA000177-TA

Ensembl Protein ID

BGIOSGA000177-PA

Length

4076

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44916086..44920161

Sequence Coding Region

44919220..44920161,44916944..44917145,44916270..44916396,44916086..44916182

Genome Context

<gbrowseImage1> name=IndicaChromosome01:44916086..44920161 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:44916086..44920161 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGCCGCCGCACGACGCCTCGCCGGCCCCACCAAACCCTAACCCCGTCTCCGACGACCCCCCGCCGCCGCCGCCGGTGACGGAGACGAAGCCGGAGCCGGAGCCGCCTCTCCCCACCACCTCGATCGACCCCACCCCGTCTGGCGACGAGGAGAGCGGCGATGACTCCTCGTCTTCTGTGTCATCCGCCTCGTCTACTTCGCCCACGGCCGCCGCGGCTGCTGCTGCTGCGGGAGGTGGAGGTGGAGGCGAGAGGGCGGCTCCCCACCCGGCGGCGAAGGATCTCCTCCATATCTCCTTCAACCAGGACTACGGCTGCTTCGCGGCGGGGACCAAGTCGGGCTTCCGCATCTACAACTGCGATCCATTCCGCGAGATCTTCCGCCGGGACCTCGGGGCCGCGGGGGACAACGGCGTCGGCGGTGGAGGAGGAGGAATCGGCGTCGTGGAGATGCTGTTCCGGTGTAACATACTGGCCCTCGTCGGCGGCGGAGACGCCCCTCACTACCCGCCTAACAAGGTGATGATCTGGGACGACCACCAGAGCCGGTGTATCGGGGAGCTCTCCTTCCGCTCCCCCGTGCGCGGTGTCCGCCTCCGCCGCGATCGCATCATCGTGGTGCTAGAGAACAAAATCTTCGTCTACAATTTCGCGGACCTGAAGCTTGTTCACCAGATCGAGACGGCGCCTAACCCGAAGGGCCTCTGCGCGGTTTCGCAGCAGCCCGGATCGATTGTGCTGGTTTGCCCTGGTGCACAGAAAGGGCAGGTTAGAGTGGAGCACTATGGTGCCAGGAAGACCAAATTCATCAATGCGCATACTTCCCGTGTCGCGTGCTTTGCATTATCGCAGGATGGGAGGCTCATTGCTACTGCCAGCACCAAGGGGACACTTGTTAGAATCTACAATGCTGCCGAGGGCAATCTCCTGCAGGAAGTACGGAGAGGTGCTGATAGAGCAGAAATATATAGCTTGGCGTTCTCCAACAATTTGCAATATTTGGCTGTATCAAGTGATAAAGGAACAATACATGTGTTCAATCTAAAGATAAATGTTGGATTAACCACGAATGATAAGCCCCTGCCTGCTCCAGATCCTGATGTTCCACATATCAGTCCATCTCTTTCTTTCATTAAGGGTGTACTACCAAAATATTTCCACTCGGAGTGGTCTGTAGCTCAGTTCAGACTCCACGAGGGGGAGCAATATATTGTTGCATTTGGCCATGAGAAGAATACCGTGGCAGTTGTTGGCATGGATGGAAGCTTCTACCGATGCCAGTTCGACCCTGTAAACGGAGGAGAGATGCTGCAGCTGGAGTGCTACAATTTCCTAAAACCATCATCGGATCAACCACAGTAG</cdnaseq>

Protein Sequence

<aaseq>MATPPHDASPAPPNPNPVSDDPPPPPPVTETKPEPEPPLPTTSIDPTPSGDEESGDDSSSSVSSASSTSPTAAAAAAAAGGGGGGERAAPHPAAKDLLHISFNQDYGCFAAGTKSGFRIYNCDPFREIFRRDLGAAGDNGVGGGGGGIGVVEMLFRCNILALVGGGDAPHYPPNKVMIWDDHQSRCIGELSFRSPVRGVRLRRDRIIVVLENKIFVYNFADLKLVHQIETAPNPKGLCAVSQQPGSIVLVCPGAQKGQVRVEHYGARKTKFINAHTSRVACFALSQDGRLIATASTKGTLVRIYNAAEGNLLQEVRRGADRAEIYSLAFSNNLQYLAVSSDKGTIHVFNLKINVGLTTNDKPLPAPDPDVPHISPSLSFIKGVLPKYFHSEWSVAQFRLHEGEQYIVAFGHEKNTVAVVGMDGSFYRCQFDPVNGGEMLQLECYNFLKPSSDQPQ</aaseq>

Gene Sequence

<dnaseqindica>1..942#3017..3218#3766..3892#3980..4076#ATGGCGACGCCGCCGCACGACGCCTCGCCGGCCCCACCAAACCCTAACCCCGTCTCCGACGACCCCCCGCCGCCGCCGCCGGTGACGGAGACGAAGCCGGAGCCGGAGCCGCCTCTCCCCACCACCTCGATCGACCCCACCCCGTCTGGCGACGAGGAGAGCGGCGATGACTCCTCGTCTTCTGTGTCATCCGCCTCGTCTACTTCGCCCACGGCCGCCGCGGCTGCTGCTGCTGCGGGAGGTGGAGGTGGAGGCGAGAGGGCGGCTCCCCACCCGGCGGCGAAGGATCTCCTCCATATCTCCTTCAACCAGGACTACGGCTGCTTCGCGGCGGGGACCAAGTCGGGCTTCCGCATCTACAACTGCGATCCATTCCGCGAGATCTTCCGCCGGGACCTCGGGGCCGCGGGGGACAACGGCGTCGGCGGTGGAGGAGGAGGAATCGGCGTCGTGGAGATGCTGTTCCGGTGTAACATACTGGCCCTCGTCGGCGGCGGAGACGCCCCTCACTACCCGCCTAACAAGGTGATGATCTGGGACGACCACCAGAGCCGGTGTATCGGGGAGCTCTCCTTCCGCTCCCCCGTGCGCGGTGTCCGCCTCCGCCGCGATCGCATCATCGTGGTGCTAGAGAACAAAATCTTCGTCTACAATTTCGCGGACCTGAAGCTTGTTCACCAGATCGAGACGGCGCCTAACCCGAAGGGCCTCTGCGCGGTTTCGCAGCAGCCCGGATCGATTGTGCTGGTTTGCCCTGGTGCACAGAAAGGGCAGGTTAGAGTGGAGCACTATGGTGCCAGGAAGACCAAATTCATCAATGCGCATACTTCCCGTGTCGCGTGCTTTGCATTATCGCAGGATGGGAGGCTCATTGCTACTGCCAGCACCAAGGGGACACTTGTTAGAATCTACAATGCTGCCGAGGGCAATCTCCTGCAGGAAGTAAGCTCCCCAAAACATTCATTTAGATGAACTTGTATACTTTGACTGTCAATGCTAGAATTGATTAACGCACTATAATTTAGGCTGAATGCATATAAAACACATTGCTGTTAAGCAACATTAGTATACTATAACCTTTCTAAGTTGTTATGTGTGACATTACTCTAGTTCATGAAAAGCTTCATATTTTGTACAAGACTGCCCATGTTGAATAATTGGTTGAAGCATTATAAAGCCGATGGCGGATGTTTTTTTGCTTTAACATATATCAGCAGCAATTTTTGCTGTGTTTATGCTGCTGCATATCATACTGCAATTTTTCAAGCTCTTTAAATGAAATGACAGTGAATACCTACTGATTGCTTCAATTTACAAATCAGGAAATTTTTCTAGCCATTGTTCTAATTATTACAGTTCTAGATATACTAGAGTTGAATGAATAACCCAACCCAAGCTTTGTGATGCCCTATCCTGTTTCCCTTCTTCCATTTGAAACTTATGGCACATCCTGTCTCCCTTTTTCCACCTGAAACTTACAGCTTAGAAGGGTAAGGATTTATAACTGGATGCGTGCTGAATGAGTCATATGACATGTCGCTTTCCAACTGCGCTCCCTTCTTTTGGAAAAATAACATACTACCTCTGGCCATCGTTATTTGACACCGTGTGTCATATATCAGTGACCGGAGGGAGTACTTCATTTCACTTCGCAAGTCTGTAGGACTCGAGGTGCCAAACATTGGTAGTTGGACCAAACAATAGTAGGCCTTTTGTTTCTCGGATGTTTTAGTAGTTTTGGGTGCTGCTTGTCATAGTTCTTGAGGAAATATGGTCCTTTCAAGTATCAATAAAGTGCATAACCTTTAGCTGATGATATGGTCTGAACCATTTCCTCAGTAAAATAGATATATGCTATATATCAACGTTGGGGTTTTGGAGTCAAGATGGCTATTTATTGATATGGTGGATTCTACAAAGTAGTAAGATCACATGGAAATGTAATGCTAGAATCATCTGGAGTGTTCTGTTATCCTCCTCTGCTCTTAAATCAAGACGTGTAGCCAGTAACTTTCTTACATGTACCATTTGCTTTTCCTTTTTTTGGATGAAGATTCCAAAAAAGATGTTAGATTGAATGTTCTTGGGTGTATCTGAAAAAGATGTTAGATTGGTTGGAATGTGTTCTAGTTACCATTGAATGACTTAGTACCCTGTAACATGCGGCTCTTTGTTTTTAGATCAGATAAGGACCATGTCAGTCATAAATACAGAGCTAACACAGTTAACCAGATTAGGGCGGAAACAGAGATGATATATGTAATGTAGTGTACGAATAACATAGCTCAACCAGTCAACATGGCCGGGATGCAGTAACAGAAGTTTTTACTAGCTATGATAAATTTAAACCTTCAAAATACACATTGAAAGGCACATCTCACCAGGCTCATCAAACTAGATACAGTATTGTTTAATTTTGAGGGCGTCTAGAGCGATGTTAAGAAACAAAGATGTATGAATATGCTTATATCTAAACACCACATAGCTCAGAACATGTCATTCCACCAGACAGGTATATCTAAATCCAGTAAAAAGTATCTGGAATACAAAAGGGCAGATTCCTGAATCAAATACTTGATCCCGTCCACATTCATATATATGTTAATGAATCTAGATATATATGTGTGTCTAGATTCATTAACATATATATGAATGTGGGCAATGCTAGAACGTCTTATAATATGAAACGGAGGGAGTATCAGTTTTATTCTTTATTCAGATTTCAATTTTTTTTATCAACTTGTAATTTATTGTGCAATCAACTTTTGAGCTTTACTAGCTTGATTAAATTCTACTTGCGGGAGACTAAATGCATTGCATCTTGCTAGTATATCACATAATAAGAACCTATATATACCAGTAAGTACTTACCACATAAGAAGATGTGTATGCTCTTGCTCTTGTCAGTTTGCTAATTTTTAATCATTATTAAGCTTACGGCATGATGAAGTTTTGCCATTTTATTTTTATTTATAGGAATTTGTCAATTAATATTTTCTGATTTCTTCTGTTATAGGTACGGAGAGGTGCTGATAGAGCAGAAATATATAGCTTGGCGTTCTCCAACAATTTGCAATATTTGGCTGTATCAAGTGATAAAGGAACAATACATGTGTTCAATCTAAAGATAAATGTTGGATTAACCACGAATGATAAGCCCCTGCCTGCTCCAGATCCTGATGTTCCACATATCAGTCCATCTCTTTCTTTCATTAAGGGTAACTATATCTCTCCATCCACTTATATATATACTTTTGTGGTTGAATGTTTCCATGTTTGAAAATAGTGATATACTGCAATCATATGCAGCTCTCCTGTGTATTCGGAAGAAAAGAACAATGATATATATTCCTTTAATTTGCTTTTGAGGCCCATCTTTGCCTTTTAAGTTTCATTTTTAGAAAGCAAATGATAAGGACTTTTAATATACATCAATATGTTCGTCTCTGAATTTTCATGGTATACTAATCCCATTATTAATAACTTGTATCCTAGTATCTTCTCCTTTTTGCGCATTTGTTGTTGCCCTTGCTGGAAGCCTGAAATCAACACTGTATGAATGGTCTTATGATTTTTTTATTTATTTGTACCCAAGTACTGGTTGCATCTTCAAAGTTCATGATATATAGGTACCCGTTTTGTGTCATTATTAGGTTAAGATTACATGTTTACAATGATGAAAATGCTGTTTTTCTGGTTTTGGTTGGATTGCATGTTACTCTTGGGTTAGCTCATTTTCACACATTGATTTTCTGTTGCTGTCAGGTGTACTACCAAAATATTTCCACTCGGAGTGGTCTGTAGCTCAGTTCAGACTCCACGAGGGGGAGCAATATATTGTTGCATTTGGCCATGAGAAGAATACCGTGGCAGTTGTTGGCATGGATGGAAGGTATGTGCATCAGGATTGAACATTCGTTGTTGCTTGTTGGAATTCCTTACCACAGGTTTGATCTTATATACCTTCCGTGTGTTACAGCTTCTACCGATGCCAGTTCGACCCTGTAAACGGAGGAGAGATGCTGCAGCTGGAGTGCTACAATTTCCTAAAACCATCATCGGATCAACCACAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000177