BGIOSGA000180

From RiceWiki
Revision as of 10:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000180| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000180, complete gene.| tag = OsI_050...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000180

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000180, complete gene.

LocusTag

OsI_05075

Ensembl Transcript ID

BGIOSGA000180-TA

Ensembl Protein ID

BGIOSGA000180-PA

Length

415

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44884380..44884794

Sequence Coding Region

44884651..44884794,44884380..44884502

Genome Context

<gbrowseImage1> name=IndicaChromosome01:44884380..44884794 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:44884380..44884794 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGGCGTGTGGGTTTTCCGGAACGGGGTGGTGAAGCTGGTGGAGAACCCGCCGGCGTCGGCGAACAGCGGCGGCGGCGGCGGCGGCGGTGGCGGCGGCGGCATCCGGCGCAAGGCGCTGCTGCACATGCCGACGGGTGAGTTCCACAAGCGCTCGTCGGTGGACCTGATCTCGCTGCCCAAGGACTTCTCCCAGTTCGGCTCCGTCCACATGTACGACATCGTCGTCAAGAACCGCGACGCCTTCCGAGTCATCGACGTCTAA</cdnaseq>

Protein Sequence

<aaseq>MSGVWVFRNGVVKLVENPPASANSGGGGGGGGGGGIRRKALLHMPTGEFHKRSSVDLISLPKDFSQFGSVHMYDIVVKNRDAFRVIDV</aaseq>

Gene Sequence

<dnaseqindica>1..144#293..415#ATGTCGGGCGTGTGGGTTTTCCGGAACGGGGTGGTGAAGCTGGTGGAGAACCCGCCGGCGTCGGCGAACAGCGGCGGCGGCGGCGGCGGCGGTGGCGGCGGCGGCATCCGGCGCAAGGCGCTGCTGCACATGCCGACGGGTGAGGTGGTCACCTCCTACGCCTCCCTGGAGCGCAAGCTCGCCGCGCTCGGCTGGGAGCGCTACTACTCCGGCGGCGGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCGCCGCCATGATGCTCCAGTTCCACAAGCGCTCGTCGGTGGACCTGATCTCGCTGCCCAAGGACTTCTCCCAGTTCGGCTCCGTCCACATGTACGACATCGTCGTCAAGAACCGCGACGCCTTCCGAGTCATCGACGTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000180