BGIOSGA000195

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Revision as of 10:01, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000195| Description = BGIOSGA000195| Definition = Oryza sativa Indica Group BGIOSGA000195, complete gene.| tag = | tid = BGIOSGA000195-TA|...")
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Gene Name

BGIOSGA000195

Description

BGIOSGA000195

Definition

Oryza sativa Indica Group BGIOSGA000195, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA000195-TA

Ensembl Protein ID

BGIOSGA000195-PA

Length

2284

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44715576..44717859

Sequence Coding Region

44717665..44717859,44717443..44717580,44717094..44717175,44716805..44716997,44716600..44716717
,44716306..44716422,44716124..44716215,44715967..44716033,44715794..44715875
,44715576..44715712

Genome Context

<gbrowseImage1> name=IndicaChromosome01:44715576..44717859 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:44715576..44717859 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGCGGTGGCCAGGGCGTCGCGCGGCGGCACGGCGCGGTGGCGGAGGAGGATCCCGACCGCCGCCGCGGCGACCGCTCGGGGAAAGAAGGTGACGACGACGGCGTCGACGTCGACGAGAAGGCGCCTCCGCCTCGCCGGACCAGCAGGCGGGTCGCGTCGCTCGACGTCTTCCGTGGCCTCACCGTCGCTCTGATGATACTGGTGGACGGCGCCGGCGGCGAGTGGCCGGTGATAGGCCACGCGCCGTGGAACGGATGCAACCTCGCCGACTTCGTCATGCCCTTCTTCCTCTTCATCGTTGGCATGGCTATTCCCCTCTCCCTCAAGAGGATTCCAGACCGCGGTCGAGCTGTGAGGAGAGTAGTGCTCAGGACACTGAAGCTGCTCTTTTGGGGAATTCTGTTGCAAGGCGGTTACTCCCATGCCCCTGATGATTTGTCTTATGGAGTTGACATGAAGCACGTGAGATGGTGTGGTATTCTCCAAAGGATTGCTCTTGCATACTTGGTGGTTGCAGTTCTAGAGATCGTAACGAAGAATGCAAAGGTTCAGGACCAGTCAAGTTCGGGCTTCTCGATTTTCAGGATGTACTTCTCCCAGTGGATTGTTGCATGTTGCATCCTTGTGATCTACCTGTCCCTTGTATATGGGATTTATGTTCCTGACTGGGATTTCAGAGCGTCAGATGTTAAAAATCGAAACTTCGGCAAAATCTTGACGGTGACATGTGGTACACGGGGAAAATTAAGTCCTCCTTGCAATGCTGTAGGTTATATTGACCGTAAAGTTCTTGGTATCAATCATATGTACCACAGGCCAGCATGGAGGAGGCACAAGGACTGTACTGATGATTCCCCACATGAGGGACCTTTTAAAACTGATTCCCCGGCGTGGTGTTATGCACCATTTGAACCTGAAGGGTTACTAAGCTCACTGTCCGCGGTGTTGAGTACGATCATCGGGGTGCATTATGGGCATGTGCTTGTTCATATGAAGAGCCACACGGACAGACTAAAGCAGTGGTCTATCATGGGCATAACTCTCCTCATTCTTGGGCTTACTCTGCACTTTTCACATGCAATTCCTTTGAACAAGCAACTGTACACCTTCAGTTATATCTGTGTTACTGCCGGTGCGGCTGGAATCGTGTTCTGCATGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTAG</cdnaseq>

Protein Sequence

<aaseq>MDGGGQGVARRHGAVAEEDPDRRRGDRSGKEGDDDGVDVDEKAPPPRRTSRRVASLDVFRGLTVALMILVDGAGGEWPVIGHAPWNGCNLADFVMPFFLFIVGMAIPLSLKRIPDRGRAVRRVVLRTLKLLFWGILLQGGYSHAPDDLSYGVDMKHVRWCGILQRIALAYLVVAVLEIVTKNAKVQDQSSSGFSIFRMYFSQWIVACCILVIYLSLVYGIYVPDWDFRASDVKNRNFGKILTVTCGTRGKLSPPCNAVGYIDRKVLGINHMYHRPAWRRHKDCTDDSPHEGPFKTDSPAWCYAPFEPEGLLSSLSAVLSTIIGVHYGHVLVHMKSHTDRLKQWSIMGITLLILGLTLHFSHAIPLNKQLYTFSYICVTAGAAGIVFCMXXXXXXXXXXXXXXXXXX</aaseq>

Gene Sequence

<dnaseqindica>1..195#280..417#685..766#863..1055#1143..1260#1438..1554#1645..1736#1827..1893#1985..2066#2148..2284#ATGGACGGCGGTGGCCAGGGCGTCGCGCGGCGGCACGGCGCGGTGGCGGAGGAGGATCCCGACCGCCGCCGCGGCGACCGCTCGGGGAAAGAAGGTGACGACGACGGCGTCGACGTCGACGAGAAGGCGCCTCCGCCTCGCCGGACCAGCAGGCGGGTCGCGTCGCTCGACGTCTTCCGTGGCCTCACCGTCGCTGTAAGTAATACTACTAACATTTTTGGTCGGTTGCTGCTCATCATCTTGTTGTTTTGATGTGGTTGTGCTCGTCTGGGGGTGCAGCTGATGATACTGGTGGACGGCGCCGGCGGCGAGTGGCCGGTGATAGGCCACGCGCCGTGGAACGGATGCAACCTCGCCGACTTCGTCATGCCCTTCTTCCTCTTCATCGTTGGCATGGCTATTCCCCTCTCCCTCAAGGTCCTCCGCTCTCTTGTCTTCCATTTGAGTAGTCTGCAACTCTGCATCTCATTTCAGTTTGGGACTTATTTTATTATTTATACAAACTGAAACTATGTTGCATTACCGATTGTCAAATTTGAACTAACATTGAAGAACATAAATAGAAGAAAATAATCATATCCGATGCTTCTCTTCTGAACTTTTATGATTTTCTTTTTTAAAATTACTAGTAGCTGAGTTTTGATGTTTCTTGGCCTCAACCTTTTACCTGAAGCAAACATGCAGAGGATTCCAGACCGCGGTCGAGCTGTGAGGAGAGTAGTGCTCAGGACACTGAAGCTGCTCTTTTGGGGAATTCTGTTGCAAGGTCATTCTGCGTAATATGCCTTTCAGAACCATGAATTCCTCATCCTATCCACATAGACGAAGTCTTAACACATTGGTAGTTGTTTATGAAATTCAGGCGGTTACTCCCATGCCCCTGATGATTTGTCTTATGGAGTTGACATGAAGCACGTGAGATGGTGTGGTATTCTCCAAAGGATTGCTCTTGCATACTTGGTGGTTGCAGTTCTAGAGATCGTAACGAAGAATGCAAAGGTTCAGGACCAGTCAAGTTCGGGCTTCTCGATTTTCAGGATGTACTTCTCCCAGTGGTATGCGAGCTTTATGATCATGTAACCCATGATTTGTGAAAGATTTCAGTTCTAGACAACTAATTGAGGGTTCTGTGTACTTACCAGGATTGTTGCATGTTGCATCCTTGTGATCTACCTGTCCCTTGTATATGGGATTTATGTTCCTGACTGGGATTTCAGAGCGTCAGATGTTAAAAATCGAAACTTCGGCAAAATCTTGACGGTATGAGAGTACTCAATTTTGGCATATTTGTTTAATTGTTCTACTAAAGTAAGCTTGATACACTAGTAAGCTACTATAAATCATAAAGCTGAAATGGTAGTATGTATTTGTCGCACTCCAACATTACATTCTTTTGTGAAAATTGTAGCTCATACTTGATGTTTCCTAATGTCTTAGGTGACATGTGGTACACGGGGAAAATTAAGTCCTCCTTGCAATGCTGTAGGTTATATTGACCGTAAAGTTCTTGGTATCAATCATATGTACCACAGGCCAGCATGGAGGAGGCACAAGGTGTGTGTTTTGATTCTGAAAAAAAAAAACTAGTGCTATTCTGAAAGTTTATCTTCACATGTTTATCAACTTCTGTACTGGTTCATGCAGGACTGTACTGATGATTCCCCACATGAGGGACCTTTTAAAACTGATTCCCCGGCGTGGTGTTATGCACCATTTGAACCTGAAGGGTTACTAAGGTATTATTCATACTTCCACCATAACTAATCTCATAAGAATTTGTGATGTTTCAGTTCCCAGTTTACATTGTTCATTCGTTGATTTTGTAGCTCACTGTCCGCGGTGTTGAGTACGATCATCGGGGTGCATTATGGGCATGTGCTTGTTCATATGAAGGTTATTTCTGTTTCATGTTTCAGACCTTTTATGTTGTAAAGGGTGTAGGCTAGAACACAATTATGACAGTTTATTTTTCCTGAAACCTCAGAGCCACACGGACAGACTAAAGCAGTGGTCTATCATGGGCATAACTCTCCTCATTCTTGGGCTTACTCTGCACTTTTCACATGGTATAGCATATAAAGTATAGTAACTATGATTTCTCTTACCTCCTCTTGTTTCATCATGGTATTCTCTCATTTTTCTTGCAGCAATTCCTTTGAACAAGCAACTGTACACCTTCAGTTATATCTGTGTTACTGCCGGTGCGGCTGGAATCGTGTTCTGCATGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000195

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA000195&oldid=37919"