BGIOSGA000220

From RiceWiki
Revision as of 10:02, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000220| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000220, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000220

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000220, complete gene.

LocusTag

OSJNBA0093F16.1

Ensembl Transcript ID

BGIOSGA000220-TA

Ensembl Protein ID

BGIOSGA000220-PA

Length

2463

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44372258..44374720

Sequence Coding Region

44374634..44374720,44373833..44374012,44373334..44373630,44372796..44373029,44372258..44372698

Genome Context

<gbrowseImage1> name=IndicaChromosome01:44372258..44374720 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:44372258..44374720 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACGGAGCAAGCTCCGGCGGCGGCGGCGGCGGTGCCGGCGGGGATGGGCCGTTGGTGTACCAGCGCTGGAAAGGGAACAATGTGTTTGTTCTTCAGGGGAGGTTTATATTTGGACCTGATGCAAGATCCTTGTACGTCACCATGTTCCTCATCATCGCGCCAGCGGCAATCTTTTGTGTGTTCGTTGCCAAAGAACTGATGGATAACTTCTCTTATGGTCTGGGATTACCAGTAATGATTGCAGCAGTTGTGTTCACGGCATATGACTTGAGCCTTCTACTTCTCACTTCTGGTAGGGATCCAGGTATTATACCTCGGAATGCACACCCTCCAGAACCTGAAGGTTTGGATGGCAATGCAGAGGTTGGATCTAACCAGACTCCACCAATGCGTTTGCCCCGAGTGAAGGATGTTGTTGTCAATGGAATCACTGTGAAGACAAAATACTGTGATACCTGCATGCTGTACCGGCCTCCTCGTTGCTCCCATTGCTCTATCTGCAACAACTGCGTTGAACGTTTTGACCATCACTGCCCATGGGTTGGGCAATGCATAGGACTTAGGAATTACAGGTTCTTTTATATGTTTGTCTTCTCAACAACTCTGCTCTGCCTCTACGTCTTTGGGTTCTGTTGGGTATACATTGTTAAGATCAGAAACTCTGAGCAGGTAACAATATGGAAGGCTATGGCAAAGACCCCTGCTTCTATTGCTCTGCTAGTCTACACGTTTATTGCCGTTTGGTTTGTTGGTGGCCTCTCTGTATTTCACTTGTATCTCATGAGCACCAACCAGACAACATATGAGAACTTCAGGTATCGGTATGATCAACGGGCCAACCCTTACAATAGGGGAGTCGTGGAGAACATTAAAGAGATATTCTTCTCAGCAATCCCTGCCTCCAAGAACAACTTCCGCGCCAGAGTCCCGGTTCCACAGGAGCAAGGTCTGAGGCCTCGCCCAACCAATGGTTTCATGAGTCCAAACATGGGGAGAGCCGTCGGTGACATCGAGATGGGTAGAAAGCCGGTGGCATGGGATGAGCCAAGGATGGCAGCCGAGATCGGCGATCTGGGAGCAGGCCTGGGCAACTTGTTGGAGGACAAGGACAGCAGGTTTCGGAATGCATCTCCAGATCTAAGCCGTGATGCCCTCGCAATCGGAGGCCTGGATGATCAAGGATCCTCAGTGATGAACCCAGGGCGCACAAGCTGGGGAGTTGAGGCAGGTCGATGA</cdnaseq>

Protein Sequence

<aaseq>MNGASSGGGGGGAGGDGPLVYQRWKGNNVFVLQGRFIFGPDARSLYVTMFLIIAPAAIFCVFVAKELMDNFSYGLGLPVMIAAVVFTAYDLSLLLLTSGRDPGIIPRNAHPPEPEGLDGNAEVGSNQTPPMRLPRVKDVVVNGITVKTKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRFFYMFVFSTTLLCLYVFGFCWVYIVKIRNSEQVTIWKAMAKTPASIALLVYTFIAVWFVGGLSVFHLYLMSTNQTTYENFRYRYDQRANPYNRGVVENIKEIFFSAIPASKNNFRARVPVPQEQGLRPRPTNGFMSPNMGRAVGDIEMGRKPVAWDEPRMAAEIGDLGAGLGNLLEDKDSRFRNASPDLSRDALAIGGLDDQGSSVMNPGRTSWGVEAGR</aaseq>

Gene Sequence

<dnaseqindica>1..87#709..888#1091..1387#1692..1925#2023..2463#ATGAACGGAGCAAGCTCCGGCGGCGGCGGCGGCGGTGCCGGCGGGGATGGGCCGTTGGTGTACCAGCGCTGGAAAGGGAACAATGTGAGCGCCAACGTCCCGCTTCTTCTCTTCTTCTCTACCTACATCTTTCTCTCTCTCTCTCTCTTCCCCTCGCTTCTTGGGTGTATGTGTGGATCTGTGCGTTTCTTGAGGTGGTGCACTCGAATTGACCTTTTTTTTTTCCTTTTAGGGACCAGGATTTTGTTGAGTTATGGGAGTGCTCGGATTATTTTGTTGAGCTTGTACTGTTGATAGCTACTTATTCTGCCGTTTATCTCGTGATTTTTGTACTTGGGAATGTGGATTGTAGGACATGTATGGTGTCCTTGTTAGTAAGAAGGACAAGAAACATGAGTACTTAGTTTTGCTTAGTCTTAACTAAGGTGTTAAATGATTTTTAGTTAATGCTAGTGCTTTAATAATCCTTCCACATGATATGATGTTACAATGTGAAAATGATTTTGTTCCTTGTCCACTTTGAGTGAGGTATGCATAGACAAAGTTGGCAATAGTGCCCAGCTAGCTGGAGTGATGCCAGTTGTATGAGATCTTCAAATTATTTCCTAGCTGGAGTGATGATAGCTGTATGAGATCTTCAAATCATTTCTGCGAATTTAAGTAGGAAAGTGTGATTGCAGCTTATAGCTTTTGTTTCCTTTTCAGGTATTTGTTCTTCAGGGGAGGTTTATATTTGGACCTGATGCAAGATCCTTGTACGTCACCATGTTCCTCATCATCGCGCCAGCGGCAATCTTTTGTGTGTTCGTTGCCAAAGAACTGATGGATAACTTCTCTTATGGTCTGGGATTACCAGTAATGATTGCAGCAGTTGTGTTCACGGCATATGTAAGTATCACTGTCAACCTTTTCAATTTACCTTCTTTGGTTTCCACAAATGTGTGGCAATTAGTATATGTGATTTTTGGGATAGGTTGTAATTGAATTGGACATGTACATAATTGTCTTTGTTTGGTAAACAGAAAAGTGTATAAATGTATATATGTATACATTCAGACTTACCACTTTAGGAATTTCTGGCATATTTCAGGACTTGAGCCTTCTACTTCTCACTTCTGGTAGGGATCCAGGTATTATACCTCGGAATGCACACCCTCCAGAACCTGAAGGTTTGGATGGCAATGCAGAGGTTGGATCTAACCAGACTCCACCAATGCGTTTGCCCCGAGTGAAGGATGTTGTTGTCAATGGAATCACTGTGAAGACAAAATACTGTGATACCTGCATGCTGTACCGGCCTCCTCGTTGCTCCCATTGCTCTATCTGCAACAACTGCGTTGAACGTTTTGACCATCACTGCCCATGGGTTGGGCAATGCATAGGACTTGTAAGTTCATACATATGCAAATCTGATAAAATTCCCTACTTACATAAACTGTATGTACAGCTGTGTTAGCCATTTCGGTCCATGAGGAGTTTATGTAATCATGCATGCATGTGATCTTTTATTGTGCTTTCCATTTGCTATTTTTATTAACTTGCTTATGCTGAAATTATCCTTTAGCTATTTCATATTGTGGTAACATAGAGCATCACTGCAGTTCCAAAGTTCTCACTTTCTATGTCTCCTGTTTCTACGATAGATTTTGAAATGCTTCAACATGCTTACAAATTTGCATATGACTGTGCAGAGGAATTACAGGTTCTTTTATATGTTTGTCTTCTCAACAACTCTGCTCTGCCTCTACGTCTTTGGGTTCTGTTGGGTATACATTGTTAAGATCAGAAACTCTGAGCAGGTAACAATATGGAAGGCTATGGCAAAGACCCCTGCTTCTATTGCTCTGCTAGTCTACACGTTTATTGCCGTTTGGTTTGTTGGTGGCCTCTCTGTATTTCACTTGTATCTCATGAGCACCAACCAGGTAAATACTGTTTCCTGAAACTGCAAGCATATATTCCTAGTCTTGCATGGTGTATGTATTCTCAGTTAATTGTTTACCTTTTTCTCTGCTTCTGTAGACAACATATGAGAACTTCAGGTATCGGTATGATCAACGGGCCAACCCTTACAATAGGGGAGTCGTGGAGAACATTAAAGAGATATTCTTCTCAGCAATCCCTGCCTCCAAGAACAACTTCCGCGCCAGAGTCCCGGTTCCACAGGAGCAAGGTCTGAGGCCTCGCCCAACCAATGGTTTCATGAGTCCAAACATGGGGAGAGCCGTCGGTGACATCGAGATGGGTAGAAAGCCGGTGGCATGGGATGAGCCAAGGATGGCAGCCGAGATCGGCGATCTGGGAGCAGGCCTGGGCAACTTGTTGGAGGACAAGGACAGCAGGTTTCGGAATGCATCTCCAGATCTAAGCCGTGATGCCCTCGCAATCGGAGGCCTGGATGATCAAGGATCCTCAGTGATGAACCCAGGGCGCACAAGCTGGGGAGTTGAGGCAGGTCGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000220