Os11g0242200

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Revision as of 09:05, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0242200| Description = Protein phosphatase 2C family protein| Version = NM_001189524.1 GI:297728178 GeneID:9267539| Length = 3906 bp| Defi...")
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Gene Name

Os11g0242200

Description

Protein phosphatase 2C family protein

Version

NM_001189524.1 GI:297728178 GeneID:9267539

Length

3906 bp

Definition

Oryza sativa Japonica Group Os11g0242200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:7616391..7620296

Sequence Coding Region

7616391..7616879,7618219..7618416,7619685..7619855,7619961..7620296

Expression

GEO Profiles:Os11g0242200

Genome Context

<gbrowseImage1> name=NC_008404:7616391..7620296 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:7616391..7620296 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtgcatgctctgctgctccccattgcccgcgctgtcgtccccggccaccggcggcgccgccgtcgttggcttctcctcttcgtcgcggaggaaggcggcgcacgtgcacccggcggtggcggtgaaggatcacgacctgtcgtcgtcgtcgccggcggcgtgcggcgacgagggcggcggtgccgtggtgatagaggaggaggcacatccgtcgatgatgatgagtgtggcggcgccggcgatgaagaagaaggcggtggcggcgaggtggaggccgccgaggctggtcgtgccggcggtggctggcgccgacgaggcaatggcggcggcggcggcggtgaaggcggcgaaggagaaggaggaggaggaggccatggaggtagagggagaagggttttgggtggcgagtaggagaggacttaggcatgcaatggaggatggctatggtgtgatcactcacaaaattgaagggcattcccaaatggcattctacggtgtgtacgatggtcacggcggccgcgccgccgtagacttcgtcgccggccgcctcggcaacaacgtcgtcgccgccgcggagaagcaaagattatcagaaaaagcatcgtctccggcggcggccgaccacgtcgcggcggcgatccgagcggcgtacctggccaccgacagcgagttcctcagccagggaacaagaggcggcgcatgcgctgcgacggcgctggtgatcgacggcgacctctacgtcgccaacctcggcgactgccgcgccgtcatcagccgccacggcgccgccgccgccctcacctccgaccacacgccggcgagggacgacgagaggtcccgcatcgagtcctcgggcgggtacgtgagctgcggcagcaatggcgtgtggcgcgtgcaggactgcctcgcggtgacgaggtcgttcggcgacggcggcctgaagcggtgggtggtggcggagccggaggtgagcaggacgccgctcgccggcgccggctgcgagttcctcgtcatcgcctccgacggcctctggaacaaggtgtccaaccaggaggcggtggacgccgtcgccgccggccattattccgtggactcgtgccggcggctggtggacatggcgcggcggagggggagcagggatgacgtcaccgtcatggtcgtcgacctcaagaggtttttgaactgctga</cdnaseq>

Protein Sequence

<aaseq>MACMLCCSPLPALSSPATGGAAVVGFSSSSRRKAAHVHPAVAVK DHDLSSSSPAACGDEGGGAVVIEEEAHPSMMMSVAAPAMKKKAVAARWRPPRLVVPAV AGADEAMAAAAAVKAAKEKEEEEAMEVEGEGFWVASRRGLRHAMEDGYGVITHKIEGH SQMAFYGVYDGHGGRAAVDFVAGRLGNNVVAAAEKQRLSEKASSPAAADHVAAAIRAA YLATDSEFLSQGTRGGACAATALVIDGDLYVANLGDCRAVISRHGAAAALTSDHTPAR DDERSRIESSGGYVSCGSNGVWRVQDCLAVTRSFGDGGLKRWVVAEPEVSRTPLAGAG CEFLVIASDGLWNKVSNQEAVDAVAAGHYSVDSCRRLVDMARRRGSRDDVTVMVVDLK RFLNC</aaseq>

Gene Sequence

<dnaseqindica>1..489#1829..2026#3295..3465#3571..3906#atggcgtgcatgctctgctgctccccattgcccgcgctgtcgtccccggccaccggcggcgccgccgtcgttggcttctcctcttcgtcgcggaggaaggcggcgcacgtgcacccggcggtggcggtgaaggatcacgacctgtcgtcgtcgtcgccggcggcgtgcggcgacgagggcggcggtgccgtggtgatagaggaggaggcacatccgtcgatgatgatgagtgtggcggcgccggcgatgaagaagaaggcggtggcggcgaggtggaggccgccgaggctggtcgtgccggcggtggctggcgccgacgaggcaatggcggcggcggcggcggtgaaggcggcgaaggagaaggaggaggaggaggccatggaggtagagggagaagggttttgggtggcgagtaggagaggacttaggcatgcaatggaggatggctatggtgtgatcactcacaaaattgaagggcattcccaaatggtaattaattaatcttttttgcttcttacaaatgatttgtctggctggatcatttcataaaaaaagacagtattattaatataataaattacttggatttgatttctagtggtgacactcgagaacacacaacatctccaaaaaaaaagaagattcacaaatgtattttagttttaaaatgtttttaacattttagaacaaagattacatatagtatagaagaattggccggcatatttaactatgccataggcttggaaccaggggcggattcaggaaaaaaaaattagggggggggctcaatttacacagtttcttcaacctccagccatttaagaacctttagtttatcattcatggtaaaaaaattgaagggggtgctccagggggtatccatgggtcttgtgggtgtaggggggactcgagtccccctacacccacgttggatccgcccctgcttggaacaacatgaattttattttattttttaacgtaagggcgggatatgaattttaactttactcacttttaatacgcatttgcttgaaatcagaagaatttgagattgtttgagagtgaaagttgaattgattctctttgagaatacatgaaaagtgcaccatttaaagctagtttgtgatataaatatattcccacatgtaaatgtgaaaattgctgaattaatgtcattggacgtagaaaagatgaaaaggggtgtcttgtatttaattatgagacgccggacatacacattttccttttctttttggtatttatatccattttctgcactcaattaatcatgcaagtttgtggctttagtttctattgaagcaaagagtggattttatctattatctaaaaactaatttaagacgcagtatattgtgacatacggtaaaataaaagtagttctcgcttgaatactaactgcatatgcatataccatttgttctggaaatagttggtttattaattcagccaaccttatcttatttcaatcaagttaaaacaattagtaatgcaatgcaaatccctgaaggagaatgcatgacgtataccacacatttttatacaattcagaccgttctcagatctcaacgaactaataataattactactcacaaagatgacaaaaagtaaacgaatcccaaccgaagtagctagagattaattatcccagtttgttgactcagttaatcagctagagatagatggacgtacgccaacaaacaccaagtcactgagagtatacgtaattaattagcacaagtacgtacgtaacgtctcagtactgtttctcattattatctgatctttttttttctcttcaatcaggcattctacggtgtgtacgatggtcacggcggccgcgccgccgtagacttcgtcgccggccgcctcggcaacaacgtcgtcgccgccgcggagaagcaaagattatcagaaaaagcatcgtctccggcggcggccgaccacgtcgcggcggcgatccgagcggcgtacctggccaccgacagcgagttcctcagccaggtgagcacagtgttcaacacattccgaaactgaaaaatttcggtcctagcagattccgatacgatattatttcgaccgtaattttaattttttttatgaattttgtaatatttttgtttaaaattttagaccaaaattaaaatttcggtatatcagcacactccgacacaaacaccgagaatgaaagatcgaaccctgggtgagcatatagccatcgtgcgttttaccgggtcttgctcgatctgctcactctgaactcgtcaaaaaaacttaaaaggataaatggccttttgtgcttggcaatttgcgtgtggtttgttgttgtctgaagtctgaactgcacgcgtatcgatcattggctgccctgccatggcgatggtgacgcttgcatcttcgtttgttttgttcgagtgtgaaggcgagatgttgacggcgaaaagggacactagctaatctgtgctgctcagttgcttctttcacttgccgtgtcataggtgtcaagtcagattccccatatatatacatatacatatatatgtatatatatatatccttatcaaaaaaaagacctgtaaagttagctttaatttgctcctgtggtatgacagaaactttaggaatttatactaatgataatgatgatttgcgcaaagcctttttatatttaagaatcgaccaataaaaggtcgtcctcaaaatcgatctatgtgatttcaattcgatattccgcttgatatatcatcaggagggaaatagggaagaattaaggcatctgtcccataatcccgagctttttaatttatttatttttaaaatttattggccttgtgcttattggctgagaatgaacatgtaaataatttgtattgttaaaaaaaatcaaatgttatgtagtctgataaaaagaagatcctaattaatgaataatagaactgatgagaagtaatcttcattaatttgtctcgggttgataatacttatcgttttggataagggtgaagtcaaactttagaatatttgattatgaatcatttttaaaatatttgtcttccaaatatggtgactacatgtatagattagtcttaaaaagtactttaataagatcatatatttgctaacaattttatatatattataatgaaaaataatggtcaaagttgttttttggagaccgtacccttgtccaaaacaacaagtattatcaacccggagggagtagaaatggctgtgcactaattaagtctcgatcgtttattattgttgtacagggaacaagaggcggcgcatgcgctgcgacggcgctggtgatcgacggcgacctctacgtcgccaacctcggcgactgccgcgccgtcatcagccgccacggcgccgccgccgccctcacctccgaccacacgccggcgagggacgacgagaggtcccgcatcgagtcctcggtaattaagctagccccaagaaacacacaaaaaaaatcaaatcaaattatcaatcaatcaccaaattaaacttaattatgattgaatttgatcgatctctatcagggcgggtacgtgagctgcggcagcaatggcgtgtggcgcgtgcaggactgcctcgcggtgacgaggtcgttcggcgacggcggcctgaagcggtgggtggtggcggagccggaggtgagcaggacgccgctcgccggcgccggctgcgagttcctcgtcatcgcctccgacggcctctggaacaaggtgtccaaccaggaggcggtggacgccgtcgccgccggccattattccgtggactcgtgccggcggctggtggacatggcgcggcggagggggagcagggatgacgtcaccgtcatggtcgtcgacctcaagaggtttttgaactgctga</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0242200, RefSeq:Os11g0242200