BGIOSGA000275

From RiceWiki
Revision as of 10:02, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000275| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000275, complete gene.| tag = OsI_048...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000275

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000275, complete gene.

LocusTag

OsI_04882

Ensembl Transcript ID

BGIOSGA000275-TA

Ensembl Protein ID

BGIOSGA000275-PA

Length

4286

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43451712..43455997

Sequence Coding Region

43455878..43455997,43455671..43455782,43455279..43455361,43455130..43455195,43454751..43454851
,43454551..43454669,43454208..43454248,43453489..43453577,43452667..43452847
,43452426..43452542,43452293..43452337,43451953..43452084,43451712..43451846

Genome Context

<gbrowseImage1> name=IndicaChromosome01:43451712..43455997 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:43451712..43455997 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGCCGCACATGGCGTCCGTCCCGGCGGCGCTCCGGCGAGCGGCGACGCTGGCGCGGTGGTATCCGGCGGCGATGTTCTCGTCGGGGATCGTCCCCGAGAACAAGCCCATCCTGGTGCGTGACTTCGTGAGGTCGGCGCTGTACGACCCCAACCATGGCTACTTCTCCAAGCGGTCGGGACCCGTGGGCGTGCTCGACTCCAGCATCCGCTTCAACCAGCTCGACGGTAGGAGTGCGTATATGCAGTACCTTGATAAGTTGTACAAGAAGCATGACATCGCTTGGTTCACTCCAGTGGAGCTCTTCAAGCCATGGTATGCCTATGCAATAGCTGCATCAATCCTCCGTACAGCAAATCTTTCAGTCCCACTGAAGATTTACGAAATTGGTGGTGGTTCTGGCACATGTGCAAAATGCATACTTGACTACATGATGTTAAATGCTCCACCGAAAGTATACAATACTATGAAATACATCTCAGTAGAAATTAGTTCCTCTCTAGCTGAGAAGCAATTGGAAACTGTTGGTGAGGTGCGAAGCCATTTGTCAAAGTTCATGGTTGAGTGTCGTGACGCAACTGACAGAGCTGGATGGGGCCGCAAGGATCCTCGACCTTGTTGGGTGTTAATGCTTGAGGTACTTGACAATCTACCACATGACCTTGTCTATTCGCCAGATCAGGTCTCTCCATGGATGGAAGTATGGATTGAAAAAGTAAATGGCAGTTCACAAGGCTCTGAGGTATACAAACCATTACAAGACCCACTAGTTTCCCGCTGTGTCGAGATTACTGGCATAAATGAAGAGAAAGTGTCTGTGAGAGACAAATTATCACTTGCTGCAAAAGGAGTTGTGTCAAAAGTATTCCCAAAGCCTCGGAGAGCTTGGTTACCAACTGGATGCTTGAAAATACTAGATACTTTACATCAAGCTTTGCCAAGCATGTCCCTTATAGCTTCAGATTTCAGCTATCTTCCTGATGTCAGTATACCTGGCGATAGAGCTCCATTGGTTTCTTCAAAGAAGGACGGGAGGACTTTGGATCATCGCAACTATCTTGAGGCTCAGGGTGACGCAGATATTTTCTTCCCAACCGATTTCTGGCTTTTGGAGAAGATCGACCATGACTGCTCTGGTTTCTCAAAACAGCAAAAGAACCCCGGTGCATTTAAACCAGTTAAGACGAGGAGAACCATCATTCTTGATTCTGCTGCCTTCATGGAAGAGTTTGGACTGCCGTTGAAGACTAGGACCAAAGATGGATATAATCCACTCCTTGATGATTTCAGGAACACCAAGTTCTATCTAAGCGTTCCTACCCATAACAAGAAATAG</cdnaseq>

Protein Sequence

<aaseq>MAPPHMASVPAALRRAATLARWYPAAMFSSGIVPENKPILVRDFVRSALYDPNHGYFSKRSGPVGVLDSSIRFNQLDGRSAYMQYLDKLYKKHDIAWFTPVELFKPWYAYAIAASILRTANLSVPLKIYEIGGGSGTCAKCILDYMMLNAPPKVYNTMKYISVEISSSLAEKQLETVGEVRSHLSKFMVECRDATDRAGWGRKDPRPCWVLMLEVLDNLPHDLVYSPDQVSPWMEVWIEKVNGSSQGSEVYKPLQDPLVSRCVEITGINEEKVSVRDKLSLAAKGVVSKVFPKPRRAWLPTGCLKILDTLHQALPSMSLIASDFSYLPDVSIPGDRAPLVSSKKDGRTLDHRNYLEAQGDADIFFPTDFWLLEKIDHDCSGFSKQQKNPGAFKPVKTRRTIILDSAAFMEEFGLPLKTRTKDGYNPLLDDFRNTKFYLSVPTHNKK</aaseq>

Gene Sequence

<dnaseqindica>1..120#216..327#637..719#803..868#1147..1247#1329..1447#1750..1790#2421..2509#3151..3331#3456..3572#3661..3705#3914..4045#4152..4286#ATGGCGCCGCCGCACATGGCGTCCGTCCCGGCGGCGCTCCGGCGAGCGGCGACGCTGGCGCGGTGGTATCCGGCGGCGATGTTCTCGTCGGGGATCGTCCCCGAGAACAAGCCCATCCTGGTAAGCGCTCGGGGCGGAGGTTTCGCGGGCTGGGAGGGGCGCAGTGAGATCTCCTTGTAGCGGGTGATGATTTGGTGGGAGCTTCGTGCGCGCAGGTGCGTGACTTCGTGAGGTCGGCGCTGTACGACCCCAACCATGGCTACTTCTCCAAGCGGTCGGGACCCGTGGGCGTGCTCGACTCCAGCATCCGCTTCAACCAGCTCGACGGTAATCCTCCTTTCTACCTGCTTCTTGGATCATTCTATTGCTTGGACCGGATTTGGCTGTGGGAGTTTGGTGTGTGTGTTCCGGCATTGCGGGAATCAGATTAGGCCGGTTCTAACATTTGTTTGCCGAGGTGGCATTTCGACGAACACGTTGCGCGTGCCACTGTTCCTCTCATGCAGAAATTTGGGACTTCTGTTTTTCTTCCATGACTGTTGAACTCCATTGATTGTTTGCCAATTACGATTCTGTGTTGTGCTGTTTTAATATCTTGGACATTTGACTAGAAACGGAAGTAATTTGCTTATGTAGGTAGGAGTGCGTATATGCAGTACCTTGATAAGTTGTACAAGAAGCATGACATCGCTTGGTTCACTCCAGTGGAGCTCTTCAAGGTGTTTTCTTAAGCTGTTCAATAGCATGTAGTGTCATTTTTCTGTCAGTTTGACCCTTGATGCGTGGTCTTTCTCTGGTGCAGCCATGGTATGCCTATGCAATAGCTGCATCAATCCTCCGTACAGCAAATCTTTCAGTCCCACTGAAGGTGCATTCTTAACTTCCTCCTCAGCATAGTTCTAGACCTCCATCCACCCATTTGCTCTTACAAGCGCCATAACCGCTCACATATGATTTAATAAATGATGGCTGTGCTACTGCACCATTTTCCTTTTCTTTTTTTCATTCCTTCTCAACTAGTAATATTACTGCAGTTCTCATGCCAAATTTTTTTTTTTGGAGAAAAGGTACCTTATAATATTATGGCACATAGTCATCTGTTTTCTTTTTCACCAAACCATATGAATTTTCCCCTGCATGGATCAGATTTACGAAATTGGTGGTGGTTCTGGCACATGTGCAAAATGCATACTTGACTACATGATGTTAAATGCTCCACCGAAAGTATACAATACTATGAAATACATGTAAGGAAACCTTCCTTCACTTTATGATCTCTGTTATGTGATCGAATATGCTTTGACCTTGCTTTTATCTTAATTTGCTAGCTCAGTAGAAATTAGTTCCTCTCTAGCTGAGAAGCAATTGGAAACTGTTGGTGAGGTGCGAAGCCATTTGTCAAAGTTCATGGTTGAGTGTCGTGACGCAACTGACAGAGCTGGATGGGGTAAGCTGACTTCTTGTCCCTGCTCCTCTGTAGGGCAATCTACTCTAAAATGCATTCTATTTAAAAAATAATGTATGAAATTTGATAATTCAGCTTGCAAATTTTCAGCTAATGCTATTACACCATATTTTGATGTAGTGCTGATAGGCTCAGTCTAAAATGTGTGGGTTACACTTACACAGACTTCCCACTAATCCCTCCATGTCAAATCACACTTATATCGGATTTTATCTTCTGATCTTTATATTGTTGCACTTTTATTCCTTGACCACTTTGGGTTACTTTCCTGTCATATTTTACAGGCCGCAAGGATCCTCGACCTTGTTGGGTGTTAATGCTTGAGGTACTGCCTTGACTATCTGCTCGGTTGTTTCTTTGATGTCTCATATGAATCAAAGAAGCAATATACCATCATTACAGTCCACCTTTCCTGTTATTAATTGACGCTTAGCTGCAGTCCTCTGGCTGGTTTGCACTAACTTAGTAGCTTGGCAGAATGTGTAGCAGCACCTCAAATTTTATTTAGGCTTTCAAGATGTGAATACTGCAAATATACCTTTTTTCAGTGTCGAGTTTATCTGTGTGTTATTTTGTGTTTCAAAGGATATGTAAGAGTAGGTTATAAAGTTATAGCAGACATAAACTCTTGATTACTCTCTCTTTGCCAATGATATTGCAAACAAAACACTGTATCAACGTTGGGCGCTGTTCCTTTACGTACCCTCACTATTGCCATAACAACCAGATATAGGATCTAGACATTCTACCAACCATCACTTATTAACCATTGTATGACCATGCCAGTAGTCTGGACTGACTGATGATGGCAAGTAGGGAAACACTGGTTGCCAGTATCATTTTGTTTGCTAAGTGAAGAATTAGATTATCATATGGACTTCTTAGCTTCGCAATCATATCTTAGAGACATGATGGCAGCAGCCTCAACAGCAACATTCATTTGGTGTATTGTCAGGTACTTGACAATCTACCACATGACCTTGTCTATTCGCCAGATCAGGTCTCTCCATGGATGGAAGTATGGATTGAAAAAGTAAATGGCAGGTTTGTGTTTTCCTTTTTCTGATTCCTGAGTGTGTATGCTTCAGACAATATATGAAAGTATCTTTTTTGCTCTTATACCGATTATTTATGTGCGGCTTTAGGCAAGTTCAATGAAATGATCTGGACTTTGGAATAATTTGATGAAATGAATGAACTTATGCTTCTTGTGGGTAAAAAAAAAATGATGGAAGTCTGACAGTCTGTAGTGAAATTCTTTTACTGAATTCTCTTCTGTTACCTCATGGCTAATGATCTATTGATCTTATGATTTCTTTTCTATATATTACTGTATTGTATTTGTAACATATATAAGCACAGTGCTACATAAGATAAGTTTATTCTTAGTATACATACTTTATATTTTGGAAAGGAAAAAAGGTATATTCTTCAACAGAAGATTAAGGGAAGGTTCTGCTTGTTTTATAGTGCTCTCATGCTGGTCTTTTACTAGATTCTTGTTAGATAAATTTATCATTTTCGATATATTATTGTTGAAGGGCTGATTCCTTACCCCTCTAGTATAACATAGTCGATCGCCCTTGTGCTTCTGGAATCTGGACAGTTGTATTGATTGATATTGCCTGGTAACTAATGAGGACAGACTTCATTAAATTTGTATGGTTGCCTTTTATGAAAAATAGTTCACAAGGCTCTGAGGTATACAAACCATTACAAGACCCACTAGTTTCCCGCTGTGTCGAGATTACTGGCATAAATGAAGAGAAAGTGTCTGTGAGAGACAAATTATCACTTGCTGCAAAAGGAGTTGTGTCAAAAGTATTCCCAAAGCCTCGGAGAGCTTGGTTACCAACTGGATGCTTGGTATGTCTTTTGAACCCACTTCCACTTGTTAGGTTATAAACTGTTATTCTATATGTGATCATATGCTGATGAGTTTGTCAGCTTACTGCCAGAATCTCTGAAATATGTGTTATGACATATGCAGAAAATACTAGATACTTTACATCAAGCTTTGCCAAGCATGTCCCTTATAGCTTCAGATTTCAGCTATCTTCCTGATGTCAGTATACCTGGCGATAGAGCTCCATTGGTTTCTTCAAAGGTGACAAGACCTTCACTGACTTTTGGTGCGTTTTTCCAACAAGGCAATTTCTCTAGGACACCTCGTTGATGTTGTGTCCTGCTTGCAGAAGGACGGGAGGACTTTGGATCATCGCAACTATCTTGAGGCTCAGGTTTGAATAATGTTTCTGTTCTGTTATATCTGAATATTAGATTCGTTGCAAACATGTCGTAGCTTAGTTGACCCTACTGTCCAACCCCATGGGGAAAAAGAACTAAATAACTTTGAGCAATTAAGTTGTTATGCTATGTGTTTAATTAAGTTGTTGTGCTATGTGTTATTATATATTATTAAAAGAACTCGGTTATGTTACTTGCCAGGGTGACGCAGATATTTTCTTCCCAACCGATTTCTGGCTTTTGGAGAAGATCGACCATGACTGCTCTGGTTTCTCAAAACAGCAAAAGAACCCCGGTGCATTTAAACCAGTTAAGACGAGGAGAACCATCATTGTAAGTTCAGACTATTTAAGCCAGTTTTGTAAGTTCATCTTGCATCACATCTTTTACAAACTTCGGTGCACTGACGAGTATGATGTTATTTGTCAACTATCGTTAGCTTGATTCTGCTGCCTTCATGGAAGAGTTTGGACTGCCGTTGAAGACTAGGACCAAAGATGGATATAATCCACTCCTTGATGATTTCAGGAACACCAAGTTCTATCTAAGCGTTCCTACCCATAACAAGAAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000275

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA000275&oldid=37999"