BGIOSGA000293

From RiceWiki
Revision as of 10:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000293| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000293, complete gene.| tag = B1417F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000293

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000293, complete gene.

LocusTag

B1417F08.31

Ensembl Transcript ID

BGIOSGA000293-TA

Ensembl Protein ID

BGIOSGA000293-PA

Length

2737

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43231573..43234309

Sequence Coding Region

43234226..43234309,43234029..43234121,43233562..43233666,43233261..43233410,43232695..43232793
,43232494..43232622,43232171..43232350,43231805..43231921,43231573..43231722

Genome Context

<gbrowseImage1> name=IndicaChromosome01:43231573..43234309 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:43231573..43234309 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCTCGCCGCGATCCCCGCCGGGGGCGCCCCCTCCGCCGGAGTTCGAGATCTCGCGGCAGTCCCGTCTCCTCGCGGCGCTGTCCAAGAAGGTGATAGATCTCGATGAGCTGAGGATGCTGGCTGCTCAGGGGGTCCCTGACGGCGCCGCCGTCCGTCCTACTGTGTGGAAGCTGTTGCTGGGCTATTTGCCGAGTGATCGTGCCCTGTGGGAGCAGGAGTTGGCAAAGAAGAGATCACAGTACGCAGCCTTTAAAGAAGAATTCCTTAGCAACCCTATGGAAATTGCACGGCAACAGGAATTAGAAGGCCAAGGGAGTGAGAATGCAGGGAGTATCAATAATGGGTTACTTCATAGATCAGAGGTTACACAAGAAGAGCACCCATTGAGCCTTGGGAAGACAACTGCATGGAATCAGTTCTTTGAGTATTCAGAGATTATCGAGCAAATTGACCGTGATGTGAAGCGCACTCACCCTGACATGCATTTTTTCTGTGGAGACTCATCTTTTGCAAAGTCCAATCAGGAATCTCTGAAAAATATACTGATTATCTTTGCAAAGCTGAATGCCGGAATACGTTATGTACAAGGGATGAATGAAATTTTGGCACCTCTCTTCTTTGTGTTTCGGAATGATCCAGATGATAAAAATGCTAACTTTGCAGAAGCTGATTCTTTCTTCTGCTTCATGGAGTTACTTAGTGGGTTTAGAGACAACTTCTGCCAGAAACTAGACAACAGTGCTGTTGGCATTCAAGGTACTCTCTCAAAACTGTCGCAACTTGTTGCGAAGTATGATGGAGAGCTTCAGCGTCATTTGGAAATAACAACAGAAATTAATCCTCAGTTCTACGCATTCCGGTGGATTACGCTACTGTTAACCCAGGAGTTCAACTTTGCGGACACTATTCACATATGGGACACACTATTAAGTGATCCTGATGGTCCTCAGGAGACCTTGCTCAGAATCTGCTGTGCAATGCTGATTCTTGTCCGAAAACGCCTATTGGCTGGTGATTTCACTTCCAATCTCAAGCTCCTGCAGAACTACCCCCCAACAAACATCAGCCACCTCCTTTACGTCGCAAACAAGCTGCACTGA</cdnaseq>

Protein Sequence

<aaseq>MATSPRSPPGAPPPPEFEISRQSRLLAALSKKVIDLDELRMLAAQGVPDGAAVRPTVWKLLLGYLPSDRALWEQELAKKRSQYAAFKEEFLSNPMEIARQQELEGQGSENAGSINNGLLHRSEVTQEEHPLSLGKTTAWNQFFEYSEIIEQIDRDVKRTHPDMHFFCGDSSFAKSNQESLKNILIIFAKLNAGIRYVQGMNEILAPLFFVFRNDPDDKNANFAEADSFFCFMELLSGFRDNFCQKLDNSAVGIQGTLSKLSQLVAKYDGELQRHLEITTEINPQFYAFRWITLLLTQEFNFADTIHIWDTLLSDPDGPQETLLRICCAMLILVRKRLLAGDFTSNLKLLQNYPPTNISHLLYVANKLH</aaseq>

Gene Sequence

<dnaseqindica>1..84#189..281#644..748#900..1049#1517..1615#1688..1816#1960..2139#2389..2505#2588..2737#ATGGCGACCTCGCCGCGATCCCCGCCGGGGGCGCCCCCTCCGCCGGAGTTCGAGATCTCGCGGCAGTCCCGTCTCCTCGCGGCGGTGAGATTTCCTGAAGATATCGCGTTACTAGGCTCTGTGTATTCGTATTTGGCTTACTGTTTTTCAGCTTTGATGGGTCGTTGTGGGTTGGGGAATTGGCGCAGCTGTCCAAGAAGGTGATAGATCTCGATGAGCTGAGGATGCTGGCTGCTCAGGGGGTCCCTGACGGCGCCGCCGTCCGTCCTACTGTGTGGAAGGTGCTCTCGGTTTGCTCGTCTTTTCATTAATCTCGGATCGTTCCGTAGGTACAGGTTTGGAGGTTAGGTTCATGAGCGTAATGACAGTAGATTACTTTCTGTTGCGTTCTAGAGTCTAGACATTGTTCAATTATTCTACTGTCTTATGTTTCTGATCGTTGATTACACATGTCCATTATTTAGTCTAATCCTTTACCCCTATCCTTTATGACGTAATGTCCGATTAAAATCGGCCTTATGGTCCTATTGTTCATCTACTCAGGGCTGCTGTTTTTTTTCTGTTAGTTAATTTGATGTGATCAGCATGCCAGCCTTCAAAAAGTTATGCTTTATGTGTGGTAAAATCTATGTTAGTTTTGCAGCTGTTGCTGGGCTATTTGCCGAGTGATCGTGCCCTGTGGGAGCAGGAGTTGGCAAAGAAGAGATCACAGTACGCAGCCTTTAAAGAAGAATTCCTTAGCAACCCTGTATGCCCCTTCAGATTCAGATTTGTGACTTTCTCTATTTTGATTGTAATTTTAAGATACACGTGCGGTGTAGTATAGTACCTGAGATCCCTTTTTGCTTGCTAGACCTCACTACAAAATAGAGATCCTGAATTCTAATTCTGTTAGGTAGATGGAAATTGCACGGCAACAGGAATTAGAAGGCCAAGGGAGTGAGAATGCAGGGAGTATCAATAATGGGTTACTTCATAGATCAGAGGTTACACAAGAAGAGCACCCATTGAGCCTTGGGAAGACAACTGCATGGAATCAGTTCTTTGAGGTGCCCACTGTTGCCTTTGGATATGGATCTTTTTACATATGTTGTTGTTGTTGTTTGTTTGTTCATCTACAAATTATTGTCACATTGTGACTAGTTGCATCTTCTTAGATCTTATATTAGAACTAGATTGGTGCCAGTAGCAGATGTGCTTACATTCTTTTGGAACTATTTTGGAGCTTTTGTGATTTGATCATAGAAAAGACCAAGCATAACTAGAATATTGTAAACCACTTGACATGATGCTAATCTCTAAACTATTGTGCTCTTCTTTGTTTCAGTTTGTTATTTTGGGGACTACATAATTAGTCAAATACGTGCTGGTTAAAAGAATAGGTTTGCATTTTAGTATTAGGAGGATCAGATTTTTGTTCTAGTACGTGCACCCTATGTTTGTATTTTTCACCAGCTTGCATCATTCTGATGTTACTACTAATTTATATCAGCTTTGACATATATCTTTCGTGCAGTATTCAGAGATTATCGAGCAAATTGACCGTGATGTGAAGCGCACTCACCCTGACATGCATTTTTTCTGTGGAGACTCATCTTTTGCAAAGTCCAATCAGGTGAACTCCACTATCTAAGTCTAAACAGAGTTCTGCTCAGAAACCTGACTGATCATAGGTCATCCTTACCAGGAATCTCTGAAAAATATACTGATTATCTTTGCAAAGCTGAATGCCGGAATACGTTATGTACAAGGGATGAATGAAATTTTGGCACCTCTCTTCTTTGTGTTTCGGAATGATCCAGATGATAAAAATGCTGTATGGAGTAAGCAATTGTTTTACCATATATATGCTTAATGCCCTGTATGATTTAGAGCAGACTGTAGTCAGTTGCTGTTCGTTATAGCAATAGTTTCTGTGGGACTATCTAACCATGATTTTGCTATCCGGAATCCCTACAGAACTTTGCAGAAGCTGATTCTTTCTTCTGCTTCATGGAGTTACTTAGTGGGTTTAGAGACAACTTCTGCCAGAAACTAGACAACAGTGCTGTTGGCATTCAAGGTACTCTCTCAAAACTGTCGCAACTTGTTGCGAAGTATGATGGAGAGCTTCAGCGTCATTTGGAAATAACAACAGAAGTAAGTATGTTCTTTGTACTGAGTACTGTCAATTTCTGATGTGTTTAGTGTGGTCCTCTGACAGATTTGCTTTATGTAGTGTTCAAACTACATTGCATCTATTTCGATCTGGCATGGACCTAATAATTCATACAGTAGTTTTGTCATCATGCTAGGAAACATTGTAGCAGGAAATCCACACTACTGCCACTGCTATCCTTATTTGTGCCTGCAGCAAAATTAACACAAGCATGGTTTCTGTTTCTGCAGATTAATCCTCAGTTCTACGCATTCCGGTGGATTACGCTACTGTTAACCCAGGAGTTCAACTTTGCGGACACTATTCACATATGGGACACACTATTAAGTGATCCTGATGGTCCTCAGGTAGCAAACAAAACACCCTGGTTTATCCTGCAAGGCTTGGTTTTTCCAGTTCGTCGCCTGAAACTTTATCTGCCGAGTGCAGGAGACCTTGCTCAGAATCTGCTGTGCAATGCTGATTCTTGTCCGAAAACGCCTATTGGCTGGTGATTTCACTTCCAATCTCAAGCTCCTGCAGAACTACCCCCCAACAAACATCAGCCACCTCCTTTACGTCGCAAACAAGCTGCACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000293

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA000293&oldid=38017"