BGIOSGA000294

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Revision as of 10:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000294| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000294, complete gene.| tag = B1417F0...")
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Gene Name

BGIOSGA000294

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000294, complete gene.

LocusTag

B1417F08.12

Ensembl Transcript ID

BGIOSGA000294-TA

Ensembl Protein ID

BGIOSGA000294-PA

Length

5480

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43167665..43173144

Sequence Coding Region

43173011..43173144,43172472..43172545,43172338..43172402,43172014..43172106,43171834..43171935
,43171534..43171698,43171341..43171429,43171149..43171270,43170582..43170763
,43168990..43169274,43168742..43168889,43167665..43168005

Genome Context

<gbrowseImage1> name=IndicaChromosome01:43167665..43173144 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:43167665..43173144 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTAGCCGACCTCAACGTCGACCCGCCGGAGAGCGACGGCGAGGACCAACCACCAACTCCCAACCCCAACGTAAACCCCGCCACCGCCGCCGTCACCGCGGCGACGGTGGTCGCCATCGATTCCTCCACTAGGAGTAGCAATGATGAGGGTAGTTTGGCAAAAAGCGTGATCACAACGAAGGAACCTGATACTGTTGAATGCGAAGATGCTGATCAACATTGTCAAGGGGCTTCTGTTGCACGCGAAGAGAAAGTTAGCAACCTGAAAGCTGCTTTGGTACATGTGGCGCGGAAGATGCCTAAAAATGCCCATGCACATTTTATGTTGGGTTTGATGTACCAAAGGCTTGGTCAGCCACAGAAGGCAATAGCGGCATATGAGAAGTCATCTGAGATATTGTTACAAGATGAAGAAGAAGTTCGAAGGCCTGATTTGCTCTCATCAGTGAGGATACACCATGCTCAGTGCATTTTGCAAACAAGTATGGGTGACACTTTTGATGAAGAGCTTGAATCTGGTGAACTAGATGAAATCCTTGTTAAAATGAAGAGTTCAGTTGAATCTGACCCCAGACAGGCAGCTGTTTGGAATATCCTTGGTTTGGTTCTTCTTCGTAGTGGTCAGCTTCAGAGTGCTATCTCAGTTTTATCTTCTCTGACGGTTGTTGCTCCAGATTACTTGGACTCTCTTGCGAATCTTGGTGTTGCCTACATTCAAAGTGGGAATCTAGAACTGGCCACAAAATGCTTTCAAGAACTTGTTATAAAAGATCAAAACCACCCAGCTGCTCTGGTGAACTATGCAGCTCTCCTTCTCTGTAAATATGGATCTTTTGCTGCAGGGTCAGGTGGTAATGTTAGTGCAGGCTCTTGTCTGCATCAGAAAGAAGGCTTAGCTGTTGCAAAAGAGTGCTTACTTGCAGCAGTGAAGGCTGATCCTAAAGCTGCATCAGTATGGGTTAATCTTGCAAATGCATATTACATGGCTGGTGAACACAGAAATTCAAAGAGATGCTTGGAACAGGCAGCAAAGCATGAACCCAGTCATATGCCCGCTCGGTATGCTATTGCAGTTCACCGAATCAGAGATGCTGTCAGATCACAGTGTTCTGATGATCAACTTCTTTGGGCTTCAAATGAAATGGCAACAGTTCTAAAAGAAGGAGACCCTTCAGCAGTTGATGCCCCAATTGCATGGGCAGGGTTGGCAATGGCTCATAGGGCACAGCATGAAATCGCTGCTGCTTATGATACTGAACAAATTAATCTGAGTGATGTAGAAGAGCGAGCTCTTTATACACTAAAACAGGCTATCCAAGAGGACCCAGATGATGCTGTTCAATGGCATCAACTTGGTTTGTACAATATTTGCACCACTCAGTTTAGCCGATCGGTAAATTTCCTTAAAGCTGCTGTAGCTCGTTCGCCAGATTGCAGCTATGTGTGGTCAAATCTTGGTATTGCATTGCAACTATCAGACGATTCATCCTGTGAGACTGTATATAAACGAGCACTCATCCTGTCTTCAAGCCAGCAGTCGTATGCAATCCTCTCCAATCTTGGAATTCTTTACCGACAGCATGGGAGGTATGAACTTGCAAGAAGGATGCTACTGCGGTCGTTGGAACTATGTCCTGGACATGCCCCAGCCAACAACAACCTGGGGCTTGTATCTATTGCAGAGGGCCGTTATGAGGAAGCTATTAGCTGTTTTGAGAAGTCTCTGCAATCTGATCCGCTGCTTGATGCTGCCAAATCAAACTTGGCAAAAGTTCTCGCATTGTCCAAGAAACAGTAG</cdnaseq>

Protein Sequence

<aaseq>MLADLNVDPPESDGEDQPPTPNPNVNPATAAVTAATVVAIDSSTRSSNDEGSLAKSVITTKEPDTVECEDADQHCQGASVAREEKVSNLKAALVHVARKMPKNAHAHFMLGLMYQRLGQPQKAIAAYEKSSEILLQDEEEVRRPDLLSSVRIHHAQCILQTSMGDTFDEELESGELDEILVKMKSSVESDPRQAAVWNILGLVLLRSGQLQSAISVLSSLTVVAPDYLDSLANLGVAYIQSGNLELATKCFQELVIKDQNHPAALVNYAALLLCKYGSFAAGSGGNVSAGSCLHQKEGLAVAKECLLAAVKADPKAASVWVNLANAYYMAGEHRNSKRCLEQAAKHEPSHMPARYAIAVHRIRDAVRSQCSDDQLLWASNEMATVLKEGDPSAVDAPIAWAGLAMAHRAQHEIAAAYDTEQINLSDVEERALYTLKQAIQEDPDDAVQWHQLGLYNICTTQFSRSVNFLKAAVARSPDCSYVWSNLGIALQLSDDSSCETVYKRALILSSSQQSYAILSNLGILYRQHGRYELARRMLLRSLELCPGHAPANNNLGLVSIAEGRYEEAISCFEKSLQSDPLLDAAKSNLAKVLALSKKQ</aaseq>

Gene Sequence

<dnaseqindica>1..134#600..673#743..807#1039..1131#1210..1311#1447..1611#1716..1804#1875..1996#2382..2563#3871..4155#4256..4403#5140..5480#ATGCTAGCCGACCTCAACGTCGACCCGCCGGAGAGCGACGGCGAGGACCAACCACCAACTCCCAACCCCAACGTAAACCCCGCCACCGCCGCCGTCACCGCGGCGACGGTGGTCGCCATCGATTCCTCCACTAGGTACGCGCACGAAGTTAATTCTCGATCTGACCGTACATGATTTCTGCTGCTTGTGCCCTCATGTCCCCTGAAGTAGTTTGGAATTGAACGTCAGATTCGCGGCCCTCATGGTCGTTTGTCGCAACCCTAGAATTTATACAGGACAAAGTGATTTTTGCGTCTATGGGACAATAGTCCTGTCATGGCATGTTTTTTGTTTGGCGTATTCATCTGAAATGAGCCATCCTTTAGATTTTCGTTGCTAGCTGAATTTATTTCATAGGATCATTCTGTAAATTTTAACTCCGAAGCTTAATTATTACTTCTAAAATTCGTACAAAGTTCAACACTAGATAATATTTGATAGCACTTATCTCACTGCTCTAAACAAATATCACTGGGCTGATAAACTCTCTGGCTTAGAAGTTATGGTCTATTAGTTCTCCATTGTGTCTGGTCATTGATTCTAGCTGATTGTGTTCACAGGAGTAGCAATGATGAGGGTAGTTTGGCAAAAAGCGTGATCACAACGAAGGAACCTGATACTGTTGAATGCGAAGGTGACATGCAAAGTAGTAAAAGAATAGTTCTCTTTTGTGAATCGATTATTTATTGTTCTTCATTAGCAGATGCTGATCAACATTGTCAAGGGGCTTCTGTTGCACGCGAAGAGAAAGTTAGCAACCTGAAAGCTGTAAGTGCTGGTCTTAATGGCACTGAACAACAAACATTTATAATTTCGTATCCCTTTTGTATATGCAACTTTACATGCAGTAGCTAAGTGAAAACAAAATGGTATTTAAATACTATTTACTATCATGCAGGCCTTTTTTTAGCATTACATTATCCTAATTAATATGCCCATGGCGATTTGAATGCACATAGTCAGCATACGTATCGCTAAAACCGGATCGTCCTTTTGCAGGCTTTGGTACATGTGGCGCGGAAGATGCCTAAAAATGCCCATGCACATTTTATGTTGGGTTTGATGTACCAAAGGCTTGGTCAGCCACAGAAGGTGAATGAATCTTCACTTTGAAAAATTGAAGTTATTTATTTTCTGCATAAAGCTCAATTGGCTGCAGAAATCTTCCAGGCAATAGCGGCATATGAGAAGTCATCTGAGATATTGTTACAAGATGAAGAAGAAGTTCGAAGGCCTGATTTGCTCTCATCAGTGAGGATACACCATGCTCAGGTGCACCAGCTTAACAACGATTCGTGATTTGATCTTCCTTTATATTCTTGGAAGTTAGAATCAGCTCTTTTCTCTGGTTGCCTATATAATTAGAACTATTTAGTCACACTTTGACTCGGTTACTTCCTAATGCAGTGCATTTTGCAAACAAGTATGGGTGACACTTTTGATGAAGAGCTTGAATCTGGTGAACTAGATGAAATCCTTGTTAAAATGAAGAGTTCAGTTGAATCTGACCCCAGACAGGCAGCTGTTTGGAATATCCTTGGTTTGGTTCTTCTTCGTAGTGGTCAGCTTCAGGTACTGATGCACTAAAACTTTTGCATTTGTTTGCATTGATCAGTATCTAGACTGAAGTGTCAATGAACTAACTGTTTGCTGATTTTTTTTTTCATCATGTACAGAGTGCTATCTCAGTTTTATCTTCTCTGACGGTTGTTGCTCCAGATTACTTGGACTCTCTTGCGAATCTTGGTGTTGCCTACATTCAAAGGTTTGAACGGTAAATATCATTTCGACTTCCGTTATCTTCCTTCTGATTGTTAACACTTGTGAATATCCAGTGGGAATCTAGAACTGGCCACAAAATGCTTTCAAGAACTTGTTATAAAAGATCAAAACCACCCAGCTGCTCTGGTGAACTATGCAGCTCTCCTTCTCTGTAAATATGGATCTTTTGCTGCAGGTATTCCAGCAACTTGATTGTCATGCTCTCTATGCTTTTCTTATCATGGTATACATGCTGACTAGTCACATTGCCATTTTAGAATCATGCTGCTCTCAGTATTATTTAGCTGAGCAAAGTTTGAACTGTGTGAAACTGTTGGAGATATGCTGTGATACCCATAAATCAATTGGGAGTCATGAAGGGCATACTGTGCAAACATCTAGTCCACACGGTTATCCCGGTGTCCTGATTCTATAGCCAAATCGATTTCACTATTGGACTTGCTAACAACATTACTTGTTTACTTACCAATATAAAACTCCAAAACAAGGGTAATCATTACAAGGGTTTATTGATGAATACTTCTTAATTTGCTTATATCTAATATTTCACTACAAATCAGGGTCAGGTGGTAATGTTAGTGCAGGCTCTTGTCTGCATCAGAAAGAAGGCTTAGCTGTTGCAAAAGAGTGCTTACTTGCAGCAGTGAAGGCTGATCCTAAAGCTGCATCAGTATGGGTTAATCTTGCAAATGCATATTACATGGCTGGTGAACACAGAAATTCAAAGAGATGCTTGGAACAGGTACCAACTATTGCTATTTTCCTTTATTAACATTAGCATTTCATAAAATACAAAAAAAAAATCCTAAGAAATTAATAAGTTATCTATGTAACAAATCAATAATTATTTATGGAAATGGATATCCGTGTTGGGAAATACGAAACCTTTATAGTCCTTGCTGCAGCACCCTGCTACAGTACTGCGGTAATCCATGTTACGGAAGGCTGCGTTCCCCGGCACGCAAAACGAAGCACGTATTATTGCATGATTAGTTAAGTGCTAACTTTTTTTTTTGAAAAATGGATTAATACGATTTCTTAAAACAACTCTCGTATATAATTTTTTTTTGCAAAAAACACACCGTTTAGCAGTTTGAAAAGCGTGCTCGCAGAAAACGAGAGAGGTGAGTTGGGAAAACTGTGGGAAGAACACAGCCTTACAGTACCATGCGTAACGACTATACTATATGCTCGTTAGCTCGTAGCTTCCATTACCAACCTGTCTGGATTTACTGTTCACATATTATACTAAAAATTTGTCTACCAGATATCCCAATTGTATAAATTATTTGATGGCTACCAACCTGTCTGGATTTACTGTTCACATATTATACTAAAAATTTGTCTACCAGATATCCCAATTGTATAAATTATTTGATGGCAATTTTCTTCTGTATCATATTAAACTATTTATATGTGTTTGTATGCACCTACTTTATACCAATAAGGTATTGCATAAATTTTGGATGTCAAGTTCATAGCCACAGCATGGCATTAATATGATTACGTCTGGAGCCAACTAATATGGTTCAATTACTTGGCAACATGACAAAAGGAAATATTGAGCTGGGTGGAGACTGATTACTGTATACCATGCTGAAAACATGCTTGTAGCATGGTGGTAAGTCCTCCAGTTGTGAGGCTACCAACCAGGGTTCACCCTGGTTCTCACAAAAAAGGCTTCCTCGTTGTATGTTGCCCTAAAGTACAGGTTAAGACACGGCCTGTGGCAACAGAGTCCCCATATGAGTAAGAGCCGGCTTTCGGGGCCTTCTCAACCTTAAATGCAAGATCTTCGGGATGTCCCCTTGGAGTTTTTTTTTACTGTGTACCATACTTTTACTCCTCTTTTCCTGGCTACTGCCAGTCTGAGCTGTTTATTTTTTATGTCTACGAGCTTATGGAATACAAACTTAAGTACTATCTTCCCCACAACTGCGACCCTCTGTTGCATTTTATGGTGGCATATGTTGTCAAGGCTTAGACATACATGGAAAGACAGATCTGAGATTTTTTTTAAAAAATAACTTTTTGGATTATTCTGTGCAGGCAGCAAAGCATGAACCCAGTCATATGCCCGCTCGGTATGCTATTGCAGTTCACCGAATCAGAGATGCTGTCAGATCACAGTGTTCTGATGATCAACTTCTTTGGGCTTCAAATGAAATGGCAACAGTTCTAAAAGAAGGAGACCCTTCAGCAGTTGATGCCCCAATTGCATGGGCAGGGTTGGCAATGGCTCATAGGGCACAGCATGAAATCGCTGCTGCTTATGATACTGAACAAATTAATCTGAGTGATGTAGAAGAGCGAGCTCTTTATACACTAAAACAGGTGATGACCTGCAAAGTACCACTGATACTTAAATTGACCTAAATCCAAACTGGTAAGTTTAAAATGATGCTGTTGTCTTATTTTTACCTCTTATTTGCAGGCTATCCAAGAGGACCCAGATGATGCTGTTCAATGGCATCAACTTGGTTTGTACAATATTTGCACCACTCAGTTTAGCCGATCGGTAAATTTCCTTAAAGCTGCTGTAGCTCGTTCGCCAGATTGCAGCTATGTGTGGTCAAATCTTGGTAAGTTTTGATCTAGTTCAATCCTGTTTATATCTCTATAGTCAAATAAACCACCACATTGGAACAATGAGTTATACCAAGGTTCTTCCACACTCTTTGAGCTTTGTTGCACTTACACATCACAATCATATTTCAAGTCTAAACTATTCTATGGAAGTGATAGTTCTTTTAAATTGGTAGACTGAGATGTTATTATATGCTCACCACTGGAAGCCTAAATGTGACCTGCTAACATACTTTTCTTTTTTGTGATTAACTATTTTTCTCTCTAATATATAAAATATACTGCGGGGGACTCCCCTGCAATGATTTGGTAAAAAAAAAAAAATTCTTACCTGGTTCAGGAACTGAGCCTTGCTCATTTTGTGGGACTTATGAGTTAATGTCACCATCACCTAAGTGTAAGTGGTTGGTGCGCAACTTCCTGGTTAAATCAATGCCAAGCTACTGCTAATCCTTGCTATCCCACTAGTTTGTGCGAAACAAATATAGCTACCTGATTCGAATTACTGCAATCTTCATTTAAAAAAAAAAATAAAATAAAAATTCCAGCGTACATCTTGTTTTTAACTACCTATCTAATCTGTTTCAGAAATTCCTGAGCCATTCCCCTAGTCAACAAAGAAACTAAATAACCATAACATTATTAGTTCACTGAGTCTCTCTCGTTTACGTTTCTGTAATTTAACTATGCACCATATGATTGCTATCTGAAAATAAATTCGTGTTGTCACAGGTATTGCATTGCAACTATCAGACGATTCATCCTGTGAGACTGTATATAAACGAGCACTCATCCTGTCTTCAAGCCAGCAGTCGTATGCAATCCTCTCCAATCTTGGAATTCTTTACCGACAGCATGGGAGGTATGAACTTGCAAGAAGGATGCTACTGCGGTCGTTGGAACTATGTCCTGGACATGCCCCAGCCAACAACAACCTGGGGCTTGTATCTATTGCAGAGGGCCGTTATGAGGAAGCTATTAGCTGTTTTGAGAAGTCTCTGCAATCTGATCCGCTGCTTGATGCTGCCAAATCAAACTTGGCAAAAGTTCTCGCATTGTCCAAGAAACAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000294

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA000294&oldid=38018"