BGIOSGA000301

From RiceWiki
Revision as of 10:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000301| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000301, complete gene.| tag = B1417F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000301

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000301, complete gene.

LocusTag

B1417F08.1-2

Ensembl Transcript ID

BGIOSGA000301-TA

Ensembl Protein ID

BGIOSGA000301-PA

Length

2071

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43124780..43126850

Sequence Coding Region

43126823..43126850,43125471..43126016,43124780..43124817

Genome Context

<gbrowseImage1> name=IndicaChromosome01:43124780..43126850 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:43124780..43126850 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCCTACTGCGGCAAGTACAAGGACGAGCTCATCAAGAACGCTGCCTACATTGGCACTCCTGGCAAGGGTATCCTTGCTGCAGATGAGTCCACTGGCACCATTGGCAAGCGCTTTGCCAGCATCAATGTCGAGAACGTTGAGGAGAACCGCCGCTCTCTCCGCGAGCTGCTCTTCACCACCCCTGGTGCCCTCCAGCACCTAAGTGGTGTGATCCTCTTCGAGGAGACCCTGTACCAGAAGACCAAGGACGGCAAGCCCTTCGTCGATGTCCTCAAGGAGGGTGGTGTCCTCCCTGGCATCAAGGTTGACAAGGGTACCGTTGAGGTTGCCGGCACCAACAAAGAGACCACCACCCAGGGCCACGATGATCTTGGCAAGCGTTGCGCCAAGTACTACGAGGCCGGTGCCCGCTTCGCCAAGTGGCGTGCCGTCCTCAAGATTGGCCCCAACGAGCCATCGCAGCTTTCCATTGACCTGAATGCTCAGGGTCTTGCTCGCTATGCCATCATCTGCCAGGAGAACGGGCTGGTGCCGATTGTCGAGCCTGAGATCCTTGTCGATGGCTCTCTACCTGTCATCGGTAGCAGTTTTTTGGTATTCCTGTAA</cdnaseq>

Protein Sequence

<aaseq>MSAYCGKYKDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEENRRSLRELLFTTPGALQHLSGVILFEETLYQKTKDGKPFVDVLKEGGVLPGIKVDKGTVEVAGTNKETTTQGHDDLGKRCAKYYEAGARFAKWRAVLKIGPNEPSQLSIDLNAQGLARYAIICQENGLVPIVEPEILVDGSLPVIGSSFLVFL</aaseq>

Gene Sequence

<dnaseqindica>1..28#835..1380#2034..2071#ATGTCGGCCTACTGCGGCAAGTACAAGGGTACGCTTCCCTCCGCCCTTTTCTACTGTTTCGCTCATCGCGCGCGCGCTCTCTCTCGATCTGTTCGTGGTTCGTTGTTCTTGCGCTTTTTTTCTTTTCCGATGATGCATGTTTAGATCTGCTTGCTGTTTGCCGTTGCGTATCACTGGATCTAGTGGTACTCGCGAACAGGCGATAGGGTTCGAGAAATTCACTAGATCTGTTCAGGTGATTGTTGGTTTGGGTGCAGTGCAGTGCGTCTGCTTTAGTTTTAGGGGTTTGGCTGCTCTGTGAAGGGTTTATGGACCGGGAGTCAGATCATGTTTTTAGCAATTATGAGTTATGCCCGATGATTAGTCTTAGTGTTCTTACGCGTCAATCGGATGTGTGAAGTGATTAGCGCGGTTGCTCTTCCTAGATTATCACGCCCATAGTTCTGTTCGGTTGTGTGACTCGTTCTAGATTGATTTTGCCTTCTATTTACTTGAAGTTGCTACTTTATTAGTCGATCTATAAAACTCAAAATCTTTTTTTGGTAAATAAAGTAATATACTTTCCTGGTGCTTATCTAGTCACGACCTAATTCTTTTCCATCAAGATGCTTATTTTGTATCTGCCAGTTGCTTTAGCTTATGCAGATGCAGTAGTTATACAGAAGCGGTTTATGGTAAAGTGATCGGATGACGTGCATGTTTTTAGTAGAAATTATGTATTGGTTCATTCTGTATCGCTTAATTGGTTAGGTGCACTGAGCATAGTTTTATCAGAGAATTTAGTATAATTAGAGTAAGCTGCACTGTGTTCTAAATATCTCTGTTGTCTTGCAGACGAGCTCATCAAGAACGCTGCCTACATTGGCACTCCTGGCAAGGGTATCCTTGCTGCAGATGAGTCCACTGGCACCATTGGCAAGCGCTTTGCCAGCATCAATGTCGAGAACGTTGAGGAGAACCGCCGCTCTCTCCGCGAGCTGCTCTTCACCACCCCTGGTGCCCTCCAGCACCTAAGTGGTGTGATCCTCTTCGAGGAGACCCTGTACCAGAAGACCAAGGACGGCAAGCCCTTCGTCGATGTCCTCAAGGAGGGTGGTGTCCTCCCTGGCATCAAGGTTGACAAGGGTACCGTTGAGGTTGCCGGCACCAACAAAGAGACCACCACCCAGGGCCACGATGATCTTGGCAAGCGTTGCGCCAAGTACTACGAGGCCGGTGCCCGCTTCGCCAAGTGGCGTGCCGTCCTCAAGATTGGCCCCAACGAGCCATCGCAGCTTTCCATTGACCTGAATGCTCAGGGTCTTGCTCGCTATGCCATCATCTGCCAGGAGAACGGGCTGGTGCCGATTGTCGAGCCTGAGATCCTTGTCGATGGCTCTCATGACATTGAGCGCTGTGCCTATGTCACCGAGAAGGTCCTCGCTGCCTGCTACAAGGCCCTCAACGAACACCATGTCCTCCTGGAGGGTTCCCTCCTGAAGCCCAACATGGTCACCCCAGGATCTGAATCCAAGAAGGTTTCCCCTCAGCTCATCGCCGAGTACACCGTCCGCGCCCTCCAGAGGACTGTCCCTGCTGCCGTGCCTGCCATTGTCTTCCTCTCTGGTGGACAAAGCGAGGAGGAGGCGACCGTGAACCTCAACGCCATGAACAAGCTCAGCACCAAGAAGCCGTGGGCTCTGTCCTTCTCCTTCGGCCGTGCTCTCCAGCAGAGCACGCTCAAGGCCTGGGGCGGCAAGACGGAGAACGTGGTGAAGGCGCAGAAGGCCTTCATCACCAGGTGCAAGGCCAACTCTGAGGCTACCCTTGGTACATACCAGGGTGATGCTGTGCTCGGCGAGGGTGCCTCTGAGAGCCTTCACGTCAAGGACTACAAGTACTGATCTGCCTCTGGTGGTGGCTGAAGATCCGATTGGACATCCTCCGTATGCATATTTAGGGTTCTGAGTGTGGTTTGGCTATCAAGCGTCCAATCTTACGGGTATCAAAAACTTTTGTCGCAATAATCTGAACCTGTGCTTTTTAATAATTAATACCTGTCATCGGTAGCAGTTTTTTGGTATTCCTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000301