BGIOSGA000314

From RiceWiki
Revision as of 10:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000314| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000314, complete gene.| tag = P0035F1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000314

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000314, complete gene.

LocusTag

P0035F12.19

Ensembl Transcript ID

BGIOSGA000314-TA

Ensembl Protein ID

BGIOSGA000314-PA

Length

2904

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42895091..42897994

Sequence Coding Region

42897944..42897994,42897608..42897793,42897399..42897506,42896049..42897256,42895091..42895934

Genome Context

<gbrowseImage1> name=IndicaChromosome01:42895091..42897994 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:42895091..42897994 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATGCAATGGAGGCCGAGGAAGGTCCTTTTCTGGCTAATGATGCTAAGTTGCATGCCGGAATGTACAGAGCATTTCATCCTGCGGTCTCAAAACTTGTAGCGATTTTCCCTTTCATTGAAGCATCAAGACCCAGAAGCAAATCTGGCATACAGGCGCTATGCTCTCTACATGTAGCTCTAGATAAAGCCAAAGGTCTTCTTCAACATTGTGCAGATTGCAGCAGGCTCTACTTGGCCATAACTGCAGAAACTGTGCTTTTGAAATTTGAGAAAGCAAGAACCCAACTTCAGGAGAGTCTTAGACGCGTGGAGGGCATAGTAACAGAAGAAATTGGTTGTAAGATTGTAGAGATTATTGCTGAGTTGGAAGAAGTGGTATTTACATTGGATCAATCAGAGAAGGAAGCTGGTGACGAGGTGATCAATTTGCTCCAGAGAAACAGGAAAATGAATAGTTCCAGTGATAGTGGGGAGCTTGAGGTTTTTCATATGGCTGCACTAAAGCTGGGAATTACGTCTTCCAGGGCAGCACTCACTGAGAGAAGGGCCCTGAAGAAGCTAATTGAGAAGGCTCGTTCTGATGAAGATAAGCGGAAAGAGTATGTTGTGTCATACCTGTACAATCTAATGAGGAAATACTCAAAATTTTTCAGAAGTGAGGCTGGTGATGATACTGATTCTCAAGGATCGTCTCCATGCTCGCCGACAGTATTAGGCATGGAGGACATGTATGGACCCTATGGTAATGGCCGAGCATTCAGCAGACAACTTTCGAGTATTCAATCATTCAATTCAAGGTTTGGATCTTTCAACTCTAGGCTTGGGTCATTCAATTGTAGGCGTGGTGGTCCAAGGTCCGAAAACATGTCGATCCCTCCTGAGGAGCTCCGGTGCCCTATTTCCCTACAACTGATGTACGACCCAGTTATCATTTCATCAGGGCAAACTTATGAGCGTGTTTGCATTGAGAAATGGTTTAATGATGGTCACAGCACCTGTCCAAAGACTCAGCAGCAATTATCTCACCTGTCTTTGACTCCAAATTACTGTGTTAAGGCCCTAATTGCCAGCTGGTGTGAGCAGAATGATTTTCCTGTTCCTGATGGTCCACCAGGATCCTTCGATGTAAATTGGAGACTTGCTTTATCTGACTCCGAAGCGACTGGCTGCGTGTCTCTTGAAAGTTTTGACTCTATCAACGTGAAGAGTGTCAAGGTAGTTCCATTGGACAACGTGAGAAAAGAAGAGCCAGCAAACAACGAATCGGGAACATTGGACGACAGCTCTTGTTATGATTTCGATATGAATGAGGGGTACCGAAACTTACTGCTAATGCTTCATGAAAAAACCAACTTACACATCCAGTGCAGGTTGGTTGAGCAGATAAGATATCTTCTGAAAGATGATGAGGAAGCTAGAATCCAGATGGGCTCAAATGGGTTTGCTGAGGCACTAGTTCAGTTCTTGAGGAACGCTGTGCAAGATGGAAATGAGAAGGCACAGGAAATTGGTGCCATGGCTCTTTTTAACCTTGCTGTCAACAATAACAGGAACAAGGGACTATTATTGTCTGCTGGAGTAATCGATCAACTTGAGCAGATGATATCAAATCCACGCCTATCTGCTCCAGCCACGGCACTATACCTTAACCTTTCCTGCCTACCTGAGGCAAAGAACATCATTGGTTCGAGCCAGGCTGTGTCATTCCTAGTAGACCGTCTGTTCAGTCATGAGGCCCGCGACACAAAAGGCAGCTCTTGCAAGCATGATGCCCTATACACACTATACAATCTCTCCAACCACCAGGCCAGCGTACCGTCGCTTTTGTCTGCGGGCATTGTGGAAGCTCTTCACTCTCTCCTTTCGGAGTCCCCGGCGTCTGAGGGCCTGGGTTGGACAGAGAAGGCCCTTGCAGTGCTCATCAGCCTTGCGGCAACCCAAGCTGGCAGAAAAGATATCATGTCCACCCCAGGTCTGATCAGCACCTTGGCGATGCTGCTGGACACCGGCGAGCCAACAGAGCAGGAGCAGTCGGTGTCCTGCCTTTTGGTGATGTGCTCAGCCGATGACAAGTGCATCGCACCGGTGCTGCAGGAAGGAGTGGTGCCTTCCTTGGTTTCCATCTCGGCAACCGGCACAGGCAAGGGGAAGGAGAAGTCCCAGAAGCTGCTCAAGCTGTTCCGGGAGCAAAGGCAGCGAGATGGGGCACAGCCTGTGCCGCAGCAAGCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCGGGAGAGACCGGTAACGGCACCATGGTGTGCCGCCGCGACTCAAAACAGCTGTGCAAGTCTAAATCGAGGAAGCTAGGAAGGACTCTGAGCTCACTGTGGAAGAACAGGAGCTTCTCCCTGTACCAATGCTAG</cdnaseq>

Protein Sequence

<aaseq>MDAMEAEEGPFLANDAKLHAGMYRAFHPAVSKLVAIFPFIEASRPRSKSGIQALCSLHVALDKAKGLLQHCADCSRLYLAITAETVLLKFEKARTQLQESLRRVEGIVTEEIGCKIVEIIAELEEVVFTLDQSEKEAGDEVINLLQRNRKMNSSSDSGELEVFHMAALKLGITSSRAALTERRALKKLIEKARSDEDKRKEYVVSYLYNLMRKYSKFFRSEAGDDTDSQGSSPCSPTVLGMEDMYGPYGNGRAFSRQLSSIQSFNSRFGSFNSRLGSFNCRRGGPRSENMSIPPEELRCPISLQLMYDPVIISSGQTYERVCIEKWFNDGHSTCPKTQQQLSHLSLTPNYCVKALIASWCEQNDFPVPDGPPGSFDVNWRLALSDSEATGCVSLESFDSINVKSVKVVPLDNVRKEEPANNESGTLDDSSCYDFDMNEGYRNLLLMLHEKTNLHIQCRLVEQIRYLLKDDEEARIQMGSNGFAEALVQFLRNAVQDGNEKAQEIGAMALFNLAVNNNRNKGLLLSAGVIDQLEQMISNPRLSAPATALYLNLSCLPEAKNIIGSSQAVSFLVDRLFSHEARDTKGSSCKHDALYTLYNLSNHQASVPSLLSAGIVEALHSLLSESPASEGLGWTEKALAVLISLAATQAGRKDIMSTPGLISTLAMLLDTGEPTEQEQSVSCLLVMCSADDKCIAPVLQEGVVPSLVSISATGTGKGKEKSQKLLKLFREQRQRDGAQPVPQQAQQQQQQQQQQAGETGNGTMVCRRDSKQLCKSKSRKLGRTLSSLWKNRSFSLYQC</aaseq>

Gene Sequence

<dnaseqindica>1..51#202..387#489..596#739..1946#2061..2904#ATGGATGCAATGGAGGCCGAGGAAGGTCCTTTTCTGGCTAATGATGCTAAGGTATCATCTTGGCAGTGCTTTTATCTTGATGGCAATGAGAGTATATATTTGTTCTTGACCTACTGTCATTAGCCACCTTACTGGAATCTTATCAACCTTTTCTGGATGTATTTGTTGATACATGATCTAAGGAAATCGTGGTTTATGCAGTTGCATGCCGGAATGTACAGAGCATTTCATCCTGCGGTCTCAAAACTTGTAGCGATTTTCCCTTTCATTGAAGCATCAAGACCCAGAAGCAAATCTGGCATACAGGCGCTATGCTCTCTACATGTAGCTCTAGATAAAGCCAAAGGTCTTCTTCAACATTGTGCAGATTGCAGCAGGCTCTACTTGGTAAGCTTATGTTACCAGCATCCCCATAAAGTTCTTCAGAAGATCCGTGCCATTGGGATCATTAGAAATGTTATATGCTTAAATATATTGTTCATTTTCAGGCCATAACTGCAGAAACTGTGCTTTTGAAATTTGAGAAAGCAAGAACCCAACTTCAGGAGAGTCTTAGACGCGTGGAGGGCATAGTAACAGAAGAAATTGGTTGTAAGGTATGTCATGTGAAAATCCTATCCTCCTAGTACTTGATTTCTTTGAACCACAAAACCAACTCTGCCCAAGTTATGTTATGGTTTTACAATTTAGTACACCATATGGTATTTCCTGACATCTGGACCTGTTGGTGCACAACAGATTGTAGAGATTATTGCTGAGTTGGAAGAAGTGGTATTTACATTGGATCAATCAGAGAAGGAAGCTGGTGACGAGGTGATCAATTTGCTCCAGAGAAACAGGAAAATGAATAGTTCCAGTGATAGTGGGGAGCTTGAGGTTTTTCATATGGCTGCACTAAAGCTGGGAATTACGTCTTCCAGGGCAGCACTCACTGAGAGAAGGGCCCTGAAGAAGCTAATTGAGAAGGCTCGTTCTGATGAAGATAAGCGGAAAGAGTATGTTGTGTCATACCTGTACAATCTAATGAGGAAATACTCAAAATTTTTCAGAAGTGAGGCTGGTGATGATACTGATTCTCAAGGATCGTCTCCATGCTCGCCGACAGTATTAGGCATGGAGGACATGTATGGACCCTATGGTAATGGCCGAGCATTCAGCAGACAACTTTCGAGTATTCAATCATTCAATTCAAGGTTTGGATCTTTCAACTCTAGGCTTGGGTCATTCAATTGTAGGCGTGGTGGTCCAAGGTCCGAAAACATGTCGATCCCTCCTGAGGAGCTCCGGTGCCCTATTTCCCTACAACTGATGTACGACCCAGTTATCATTTCATCAGGGCAAACTTATGAGCGTGTTTGCATTGAGAAATGGTTTAATGATGGTCACAGCACCTGTCCAAAGACTCAGCAGCAATTATCTCACCTGTCTTTGACTCCAAATTACTGTGTTAAGGCCCTAATTGCCAGCTGGTGTGAGCAGAATGATTTTCCTGTTCCTGATGGTCCACCAGGATCCTTCGATGTAAATTGGAGACTTGCTTTATCTGACTCCGAAGCGACTGGCTGCGTGTCTCTTGAAAGTTTTGACTCTATCAACGTGAAGAGTGTCAAGGTAGTTCCATTGGACAACGTGAGAAAAGAAGAGCCAGCAAACAACGAATCGGGAACATTGGACGACAGCTCTTGTTATGATTTCGATATGAATGAGGGGTACCGAAACTTACTGCTAATGCTTCATGAAAAAACCAACTTACACATCCAGTGCAGGTTGGTTGAGCAGATAAGATATCTTCTGAAAGATGATGAGGAAGCTAGAATCCAGATGGGCTCAAATGGGTTTGCTGAGGCACTAGTTCAGTTCTTGAGGAACGCTGTGCAAGATGGAAATGAGAAGGCACAGGAAATTGGTGCCATGGCTCTTTTTAACCTTGCTGTCAACAATAACAGGTATTGAATTTAATTTCCATTTATGTGCTGCTTATCAATTACAACTAGCTGAGTTCATCTTCAGTATTTCTACTTAATCTGTAGTTTTGCTTAACCTTTGCTTGTTTATTTCAGGAACAAGGGACTATTATTGTCTGCTGGAGTAATCGATCAACTTGAGCAGATGATATCAAATCCACGCCTATCTGCTCCAGCCACGGCACTATACCTTAACCTTTCCTGCCTACCTGAGGCAAAGAACATCATTGGTTCGAGCCAGGCTGTGTCATTCCTAGTAGACCGTCTGTTCAGTCATGAGGCCCGCGACACAAAAGGCAGCTCTTGCAAGCATGATGCCCTATACACACTATACAATCTCTCCAACCACCAGGCCAGCGTACCGTCGCTTTTGTCTGCGGGCATTGTGGAAGCTCTTCACTCTCTCCTTTCGGAGTCCCCGGCGTCTGAGGGCCTGGGTTGGACAGAGAAGGCCCTTGCAGTGCTCATCAGCCTTGCGGCAACCCAAGCTGGCAGAAAAGATATCATGTCCACCCCAGGTCTGATCAGCACCTTGGCGATGCTGCTGGACACCGGCGAGCCAACAGAGCAGGAGCAGTCGGTGTCCTGCCTTTTGGTGATGTGCTCAGCCGATGACAAGTGCATCGCACCGGTGCTGCAGGAAGGAGTGGTGCCTTCCTTGGTTTCCATCTCGGCAACCGGCACAGGCAAGGGGAAGGAGAAGTCCCAGAAGCTGCTCAAGCTGTTCCGGGAGCAAAGGCAGCGAGATGGGGCACAGCCTGTGCCGCAGCAAGCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCGGGAGAGACCGGTAACGGCACCATGGTGTGCCGCCGCGACTCAAAACAGCTGTGCAAGTCTAAATCGAGGAAGCTAGGAAGGACTCTGAGCTCACTGTGGAAGAACAGGAGCTTCTCCCTGTACCAATGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000314