BGIOSGA000315

From RiceWiki
Revision as of 10:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000315| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000315, complete gene.| tag = OS01G09...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000315

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000315, complete gene.

LocusTag

OS01G0900900

Ensembl Transcript ID

BGIOSGA000315-TA

Ensembl Protein ID

BGIOSGA000315-PA

Length

1829

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42889359..42891187

Sequence Coding Region

42891151..42891187,42890306..42890427,42890177..42890217,42889781..42889879,42889561..42889705
,42889359..42889436

Genome Context

<gbrowseImage1> name=IndicaChromosome01:42889359..42891187 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:42889359..42891187 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGATCGGGAGCTCCGCCCGCTGCGATCGATCCGAATTACAGGCGATGGGAGATGCCTCTTTAGGTCTGTTGCGTACGGTGCCTGCTTAAGGAGAGGAAAGCAGTCGCCAAGCGATAGCATCCAGAAGGAGCTTGCCGATGAGCTTCGATCGAAAGTAGCAGATGAGTTTGTCAGGAGAAGAGGGGACACTGAATGGTTTCTTGAAGGAGATTTCGAGAGCTATGTGAGACAGATAAGAAAGCCTCATGTTTGGGGAGGAGAACCTGAACTGCTCATGTGCTCCCATGTTCTTAGGATGCCTATCACTGTTTACATGTATACCAAGGGCTCTGATAGCCCCAGGATCATCGCCGAATACGGTCAGGAGTATGGCAAGGACAATCCAATCTGCGTGCTCTACGATGGTTACGGACACTACGATGCGCTGCAGCCATCTCTTGAGAGGAATACAGATAACCGAAGATTACGCTACCTAAGATTGTTCTCAAGGACAGTATCAAGATCCTCTGCTACATGA</cdnaseq>

Protein Sequence

<aaseq>MSDRELRPLRSIRITGDGRCLFRSVAYGACLRRGKQSPSDSIQKELADELRSKVADEFVRRRGDTEWFLEGDFESYVRQIRKPHVWGGEPELLMCSHVLRMPITVYMYTKGSDSPRIIAEYGQEYGKDNPICVLYDGYGHYDALQPSLERNTDNRRLRYLRLFSRTVSRSSAT</aaseq>

Gene Sequence

<dnaseqindica>1..37#761..882#971..1011#1309..1407#1483..1627#1752..1829#ATGTCGGATCGGGAGCTCCGCCCGCTGCGATCGATCCGTACGTGACGCCGATCGCGAAATGATGCGATGCCCGGCTCCTGTTTTGATTGATCCCCTTGGATCCTTGATTGCCTTGATCTTTCCTCTTACCTCTTTCTTGTTCTTCTCCTGTTGGGTTCTTTGTTTTCTTGGTTAGTGATTGGATGCTGCAGAGGAAGCAAATGAGTTAGTTGCTATTAGTGCAAGGTTGCTATTAGGGAGTTGTTACCCATTTGTGAAAAGGTGGGCTTTCTTTTTGGTTGTGATTAGTGGTAAGAGAGATCACTGATTTTGGTATTCGGGGATAAAAAAAGTAGATATGGGAGAAAGGAGAGATCAGTGTTGATTTGCAGTCTAAAGGCTGTAATCTGAAGCGATAAACTAATCGGGTAGCAAGATGCCTTTCCTGTCGCTCCTAGATGTGCTTTTCTTGTGCGATTCTTTCCCTGTTGCGTGTGTATACTATATGCTAGTTTAAGGTCAAGGTCGCAGCTTAAAATAATTTGGTGTCCGCTTTGACAAAATTAGATGAGAGATCAGTCTCTTCCCTTTTGAAAGAAGAAAAGAAAATAGTGACTTTCTTCTTTACATATGTCCTGTTGTGCATCGGAATAATTTTTTCACTGCACTCTCTATCAGTCTAACTTATCAGTTCTGATTGTGTTCTTATTTTTGCTTCAGTTGATGCTCTAGATTGCTGAACATAGGATGTAGCTAGAATGATGTCGTCTTCACATTTCAGGAATTACAGGCGATGGGAGATGCCTCTTTAGGTCTGTTGCGTACGGTGCCTGCTTAAGGAGAGGAAAGCAGTCGCCAAGCGATAGCATCCAGAAGGAGCTTGCCGATGAGCTTCGATCGAAAGTGATTGTTCAATGTTCATCACTTGATGGCTATGCAATTCAGTGAACTTGTGTGATCCACTGAAGAACTTTTTTTTTGTCTGTTCCAGGTAGCAGATGAGTTTGTCAGGAGAAGAGGGGACACTGAATGGTTTCTTTTCCTTCCTGTTGTCTATTTGATGCATCTTTTACCTTTGATGATACTTTTGCAGAAGCAGAAGGAGTATAACTAAAAATATGCTTAAAATGACAAACTAATCACTTTTGCTGGTTTATCCATATGTGAAATTCTCATGCAACGACTGGCTTTAGCTATTACTCCTACATGTTTGCCTTCTGGATTTCATTGTTAACTCATAGTCTAATGATGTTTCAACCATAAATTTTAAAAAAGCCTCAGTCAGATAATGTATTTTTTTTTCTGGTTAATCTTCATTATGATGGATAGGTTTCTTGAAGGAGATTTCGAGAGCTATGTGAGACAGATAAGAAAGCCTCATGTTTGGGGAGGAGAACCTGAACTGCTCATGTGCTCCCATGTTCTTAGGTAGGTACCTTTCTTGTGTTATCCATATCTTCCTCTGCATAATTGCAATTGTTATTGAGTGATGCCATATTGCAGGATGCCTATCACTGTTTACATGTATACCAAGGGCTCTGATAGCCCCAGGATCATCGCCGAATACGGTCAGGAGTATGGCAAGGACAATCCAATCTGCGTGCTCTACGATGGTTACGGACACTACGATGCGCTGCAGCCATCTCTTGTAAGAACACAATCAAGGCTGTGAGTATAGCACTGTACAAAATCTGACAATGGCCTACTCATGCTATTAAGTTCTTTTGCTTCAGTCTTCTTTTTGAGGAACCATCCCCCTGTAAAATTTGCAGGAGAGGAATACAGATAACCGAAGATTACGCTACCTAAGATTGTTCTCAAGGACAGTATCAAGATCCTCTGCTACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000315