BGIOSGA000327

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Revision as of 10:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000327| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000327, complete gene.| tag = P0506A1...")
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Gene Name

BGIOSGA000327

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000327, complete gene.

LocusTag

P0506A10.2-3

Ensembl Transcript ID

BGIOSGA000327-TA

Ensembl Protein ID

BGIOSGA000327-PA

Length

2669

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42650794..42653462

Sequence Coding Region

42653393..42653462,42653242..42653329,42653116..42653144,42652951..42653024,42652676..42652787
,42652048..42652139,42651701..42651862,42651239..42651326,42650794..42650858

Genome Context

<gbrowseImage1> name=IndicaChromosome01:42650794..42653462 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:42650794..42653462 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGAGAAGAGGCAGCGGCTGGTGATCTCTCTCTCGGCGCTCTGCCTCGCCGTCGCCGTGATGTCCGGGTTCGACTACTACGTGCTGGCGCTGCAGTGGCCGGGCACCGTCTGCCGCCAGACCAGCCATTGCTGCAGCTCCAATGGCTGCTGCCGCTCACATCCGCTCAAATTCTTCACGATCCATGGGCTGTGGCCGCAGTACAGCTATGGGGGATGGCCATCCTGCTGCAGGCCAACCACATTCGACGGCAACAAGATCTCGAGGTTGAAGACGATACTCGAGGAGTACTGGCCGTCCTTGTACTGCGGCTCTTTCTCAACCTGCTTTGGTGGGAAAAGGCCATTTTGGGTGCATGAGGTAGACATTGAAACTCATGGAACATGTGGTTACCCTGAAATACAGGATGAATACGACTACTTCTCTACAGCACTGTACCTTTACAGCAAATATAATGTGACGAAAGCTCTGAAGAAAGCACATATTTATCCTAGAGGAGGCAGGAAATACTTAGTTGGTCATATCGTCTCTGCTATTGAATTTTCCTTTGGGGCAATGCCATCTATTGTGTGTAAAAACGGCTCAGTTCAAGAACTGAGGCTCTGCTTCCACAAGGATTATCAGCCTCGCGATTGCTTAGTTGAGGGTGAGAACTCTGTTAGAAGAAACCATTGCCCTCGATACGTCACTTTACCATCATATAAACCACATGCATTTGGCAATTCTACAGAAGGAATCAGTAACCAAGTCAACGTTGAGCACCAATCATATCAGTAG</cdnaseq>

Protein Sequence

<aaseq>MEEKRQRLVISLSALCLAVAVMSGFDYYVLALQWPGTVCRQTSHCCSSNGCCRSHPLKFFTIHGLWPQYSYGGWPSCCRPTTFDGNKISRLKTILEEYWPSLYCGSFSTCFGGKRPFWVHEVDIETHGTCGYPEIQDEYDYFSTALYLYSKYNVTKALKKAHIYPRGGRKYLVGHIVSAIEFSFGAMPSIVCKNGSVQELRLCFHKDYQPRDCLVEGENSVRRNHCPRYVTLPSYKPHAFGNSTEGISNQVNVEHQSYQ</aaseq>

Gene Sequence

<dnaseqindica>1..70#134..221#319..347#439..512#676..787#1324..1415#1601..1762#2137..2224#2605..2669#ATGGAGGAGAAGAGGCAGCGGCTGGTGATCTCTCTCTCGGCGCTCTGCCTCGCCGTCGCCGTGATGTCCGGCGCGCTGCTGCCGCCGCGGGCGTCGGCGGCGGGAGGGGTCGGGAGGAAGCGGCGGTGGGCCGGGTTCGACTACTACGTGCTGGCGCTGCAGTGGCCGGGCACCGTCTGCCGCCAGACCAGCCATTGCTGCAGCTCCAATGGCTGCTGCCGGTGACCCCCCATCCCTCCCTTTCTTGGCTAGTTTCGCCATTGTCAGCTTGGATTGATTTGCTCACCTGGTGCTTCTCCCCCTTTTCCGTCTCTGCAGCTCACATCCGCTCAAATTCTTCACGATCCGTAAGTGTGTATGAGTTCTTGCGGATCAGAAGCTAAATTGATAATCGATTGTATCAATTCGTGAATTCATATTCTTAATTTGTTGGAATAGATGGGCTGTGGCCGCAGTACAGCTATGGGGGATGGCCATCCTGCTGCAGGCCAACCACATTCGACGGCAACAAGGTGGCTGCCAACCACCCATCTTATCTTCAGAATGGGATATTGGGATGTGGTCGTTCCCCCCCCCCCCCCCCCCCCCCCAATTTGATGAAGAACTGCTAGCTTCTTGCTGTAAGATTGGCATGTCAATGTGGGTGTGTATTTATCTGGTTTTACCTTGTGACAGATCTCGAGGTTGAAGACGATACTCGAGGAGTACTGGCCGTCCTTGTACTGCGGCTCTTTCTCAACCTGCTTTGGTGGGAAAAGGCCATTTTGGGTGCATGAGGTAGACATTGGTATCTAAATGAGATATGTGATTTGATGAGGAGAAATTACTGACACCTTACCCTTTTTTCCTCTTGACTCTTGTTCATGTGCTGATGCTTTACTCGACATTCGTCAGTGGGGTATGTGATTTCTGAACTTGTTGTTCTGCTCCTTAATGTTGTCAAAATTGTTATTCCTAGATAAGATAAGTACTACAAAATTCCTTTTGTTTAAAATATCATGTTGCCAATGCTTGAGAAAAGAATCTTTATAGTTTCTTACACCATGAATAATTCCTGTCCTCGAATCACTGAAGACAGACTGACTGCATTCCATGAGTTTTTTTGAACATGACAAATTCAGTTAGTTCCTCGTATGTATTAAAAAGGGACTGCTTTATGTCTTTTTTACGTATAATTTATCTGGTCACAAACAGACAGTTCAGAAGCTGCATGAAAAGGTTTGACCTCTAATTGGCAGGAGCATCCCAACCTAAACTTTCCTAAGCGTGCCAGATGATGCGGCTCCATTTTTATTGTATCTAATACTCCACATTTTTGGGCAGAAACTCATGGAACATGTGGTTACCCTGAAATACAGGATGAATACGACTACTTCTCTACAGCACTGTACCTTTACAGCAAATATAATGTGACGGTTAGTGGATAGTATTTGGTTTCATGATATGAATTCGTGAAACTATAAATAATCACCTCCCATCTTAATTCAATATCCCGCGTCAAAAAAGAATCTTAATTCAATATTATATACATATGCGCAAGGTATTTGAGGTTGTAACATTTCCTCAGCACATTGATATAGTTCTCACTCTGGTCTTGCAGAAAGCTCTGAAGAAAGCACATATTTATCCTAGAGGAGGCAGGAAATACTTAGTTGGTCATATCGTCTCTGCTATTGAATTTTCCTTTGGGGCAATGCCATCTATTGTGTGTAAAAACGGCTCAGTTCAAGAACTGAGGCTCTGCTTCCACAAGGATTATCAGGTAATTTTGATGTATTTGTGAGTGAAGCACATTATTATGTCATCATGTCCTTACATATTCAGATTTGATTAAATCGGTCAAAGTAGGAATTTCTCCTGTTATAGTGATATTAGAAGGGCAGGGCCTAATTTTTAATCGAGTCACAGTAGGCCCTAGATTATGCAATAACAAAACATACATATTTTTTCAAAACGGCTAAACATAGAGTGTTGAGATAGACAACTGGAATGGATATCCCAGGCTCCCAGCTCTCAAGTGTCCTTGAAATTATTATTTTTACTATGTGGCTTTCGTGATAAACATTTATCGTCAAGTGTAGATTCTTCTGAGCATTTCTCAAATTCATAATTGAACTAAATAGCGTATTTTTGCAGCCTCGCGATTGCTTAGTTGAGGGTGAGAACTCTGTTAGAAGAAACCATTGCCCTCGATACGTCACTTTACCATCATATAAACCACATGGTGAGTTATCTGTTTGTGCCAATTATCAGTCACTGAAATGAACAGACAGTACATGCAATAGAAACTATGTTTTCTGAACTTCTGAAATAGTACTAGGTTTTCTGAAATAGTACTAATTGAACAATATAGTTCATTTAATCATCTTCTTCTTGAATTTATGTGGCTTTACCTTCTCTTGTTTTAAAGATAGGTTTTCTGAAATAATTCTCTCAGTTTTGACACTTATTATCTGGAGAAATGCATGCCTTGTGCTAATAGAACAATAGTATAATTGTTTCAGTCATCTTCTGCAATTCATGTGACTTTACCTTCTCAATGAAAACATACCTTGTTCATCCCATGTGTTTTCCCTTTTTCTGACACTCCGGTTGCACTTGCAGCATTTGGCAATTCTACAGAAGGAATCAGTAACCAAGTCAACGTTGAGCACCAATCATATCAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000327