BGIOSGA000328

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Revision as of 10:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000328| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000328, complete gene.| tag = P0506A1...")
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Gene Name

BGIOSGA000328

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000328, complete gene.

LocusTag

P0506A10.1

Ensembl Transcript ID

BGIOSGA000328-TA

Ensembl Protein ID

BGIOSGA000328-PA

Length

2444

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42647317..42649760

Sequence Coding Region

42649537..42649760,42649357..42649385,42649143..42649216,42648895..42648996,42648506..42648595
,42648132..42648293,42647478..42647571,42647317..42647387

Genome Context

<gbrowseImage1> name=IndicaChromosome01:42647317..42649760 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:42647317..42649760 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACGGCGAGGAAGGCGCCGCGCATGGTGGCGATCTGGGCGGTGGTGGTGGTGGTGGTCGCCGCTGATCTGTTCGGAGCGGCGGTCGCGCGGTCGGCGTCGGCGCGTCACGCGGTGGGGAAGAAGCAGCGGGAGTTCGACTACTTCGCGCTGGCGCTGCAGTGGCCTGGCACCATCTGCGCCTCAACCCGCCACTGCTGCGCCATCAACGGATGCTGCCGCTCGGAGCCGCTCCAGACGTTCACGATCCATGGGCTGTGGCCGGACTACGACGACGGGACCTGGCCGGCGTGCTGCCGCCACACCAGCTTCGACATGGACAAGATATTGCCCCTGAAGCCGACGCTTGAGAAGTACTGGCCGTCCCTCTACTGCTCATCCTCTTCCACTTGCTTCAGTGGCAAGGGGCCCTTCTGGGCTCATGAGAAACATGGAACATGCTCATCCCCGGTAGTTAAGGATGAATTAGAGTATTTCACCACTGCTCTTGACCTCTACTTCAAATACAACGTCACGGAAATGTTGGCAAGTGGTGGTATCTATGTTTCAAATGGTAAACAATATGCGCTAACTGATGTCATTGATGCCATCAAATGTGCTTTTGGGGCCTCACCGCAAATTGTTTGCAAGAAGGGCTCAGTTGAAGAACTGAGGTTATGCTTTGACAAAGATTTGAAGCCCCTTGATTGCCTTACTACTACTGTTACCAATGAAAACGTATCGAAGAAGTATTGCCCTCGATACATCACCCTGCCAACATATGACCCCATAGTACATGCTAATTCTACTCGGGAGATCATAACAGTCGAAAGTGAGGTCTATGGATATCTTTACACATCCTAA</cdnaseq>

Protein Sequence

<aaseq>MATARKAPRMVAIWAVVVVVVAADLFGAAVARSASARHAVGKKQREFDYFALALQWPGTICASTRHCCAINGCCRSEPLQTFTIHGLWPDYDDGTWPACCRHTSFDMDKILPLKPTLEKYWPSLYCSSSSTCFSGKGPFWAHEKHGTCSSPVVKDELEYFTTALDLYFKYNVTEMLASGGIYVSNGKQYALTDVIDAIKCAFGASPQIVCKKGSVEELRLCFDKDLKPLDCLTTTVTNENVSKKYCPRYITLPTYDPIVHANSTREIITVESEVYGYLYTS</aaseq>

Gene Sequence

<dnaseqindica>1..224#376..404#545..618#765..866#1166..1255#1468..1629#2190..2283#2374..2444#ATGGCGACGGCGAGGAAGGCGCCGCGCATGGTGGCGATCTGGGCGGTGGTGGTGGTGGTGGTCGCCGCTGATCTGTTCGGAGCGGCGGTCGCGCGGTCGGCGTCGGCGCGTCACGCGGTGGGGAAGAAGCAGCGGGAGTTCGACTACTTCGCGCTGGCGCTGCAGTGGCCTGGCACCATCTGCGCCTCAACCCGCCACTGCTGCGCCATCAACGGATGCTGCCGGTAGAGCCTCCTCCTCCTCCTCCCCGTCTCCTCCCACCGCCGCCGCCGCACGCGCGCGCTCGTCGGCCGGTTTTGGTGGTCGTTGCGATTTTCGCGCGCGCGCCGCGACCTTCGGAGATTTTTTTTTCCCCTGATGCGGTTGCTTTTGCAGCTCGGAGCCGCTCCAGACGTTCACGATCCGTAAGTGCGCCGCGCAGCTGCTCGATCGATCGGTTTAATCCCACCCTCGCGTTCGATTTGGATGCCGTTTGCTGCTCGAGCGAATCAATTTCTGATTGATCGATGTGTGTGCGTGTGTATTTTGCGTACTGGATGAACAGATGGGCTGTGGCCGGACTACGACGACGGGACCTGGCCGGCGTGCTGCCGCCACACCAGCTTCGACATGGACAAGGTACTTGGCTGCAGAGCTCCTCCTCTTTGTAGCTCGAATGCTCGATGCTTACACGGTTAATTGAAAGAGTGACAATGACAAGGTGGTTGTGCTTTGGTGCTAACCTTATCGATGCATGGATTCGTCATTCGATTTTTGTGGTGTAGATATTGCCCCTGAAGCCGACGCTTGAGAAGTACTGGCCGTCCCTCTACTGCTCATCCTCTTCCACTTGCTTCAGTGGCAAGGGGCCCTTCTGGGCTCATGAGGTATATAAAAGTTTCAGAAGTCAAGAACTAATGGATTGGATTATACAAGTATACCTCTTTTGGATTTGCAACTGACCTTTTGTGCTGTTTTCCTGTCTGTTTGTCATATGGTATTCGATCATTCGCGGCATATCTTTAGTGGGGTAATGTTCTTCAAATCATTCCACCTTATGTTATGAGCTTTCTTATTGTTTAACTTTCTAACAGGAAGTTATTGATTCCACTTGAAATATCACGTAGTTATATTTACTAGGCACTGATTTGTCATTACTCAACTCAGCTTTCTTTTTTTCTCAGAGAAACATGGAACATGCTCATCCCCGGTAGTTAAGGATGAATTAGAGTATTTCACCACTGCTCTTGACCTCTACTTCAAATACAACGTCACGGTAAGCATTTGGGCTTGGACTTACTAGTTGTAGGCTTGTAGCATCGAGTTGATTTACTTTCCAGACAAAAGTCACTGTGTCACAAATTACAGCAACAGTAGCCTTTTGTCCAAATAGGTCAGGGTGTTATAAGGACAAGGCCCAAGTTGAGCCACATGCCATGGCACAAAATCTTGTCCTTTTTTCTCTGATTAAATCGCACCGCATTGCAGGAAATGTTGGCAAGTGGTGGTATCTATGTTTCAAATGGTAAACAATATGCGCTAACTGATGTCATTGATGCCATCAAATGTGCTTTTGGGGCCTCACCGCAAATTGTTTGCAAGAAGGGCTCAGTTGAAGAACTGAGGTTATGCTTTGACAAAGATTTGAAGGTTAGCTCTCCTTTTTGTTCTTCGAACAACTTCTTACAGTTTGTATCATGAAAATTATGCTGTCTTTTAGAATGAACGACCAACAACATGCACATTTTGAAATTATGTTCCTACAGGCCTGCAGTTTCATTTGCTAAAACTCAAGCATTTACCAACCTCAAACATGCTACATCTTTCTATATGTATGCCTAATAGTGAAAACAAAAAACTTGATCACTGTTGAAACACCACTAAACTGTACGGAATTCAAGGTGATTATATGCATCATATAGTGTTTTCTGCTTGTGTTTCTTCATGCCCCTATTAAGGAATGTTTTATCTGTTGTGTTGAAATTTCTAAACATGTGCTGCATAAATTTTGACTGGTGAGTATTTTTCCCAAACTAGCTACCCATGTGAATATTTTCCCCAAAAGTTGGGAATGTGCGCAGTCCTGCACGTGTTATTTGGCAATGTCTCACATGGTCACATGTTGCATATGCTGTACAATAAAATACTATAATCTTGCTTTTTCAAAGAAAACCTGTACAATATTGCTAAACTCGGTGGTATATTTCCAGCCCCTTGATTGCCTTACTACTACTGTTACCAATGAAAACGTATCGAAGAAGTATTGCCCTCGATACATCACCCTGCCAACATATGACCCCATAGGTAAGTTCAGTTGCTGGAATGTAAATCATTGTTCCAACTCTTGATGCGCATGCTAATCCTATTGTCTGATTCGTCTGAACATGATTGCAGTACATGCTAATTCTACTCGGGAGATCATAACAGTCGAAAGTGAGGTCTATGGATATCTTTACACATCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000328