BGIOSGA000331

From RiceWiki
Revision as of 10:03, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000331| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000331, complete gene.| tag = OS01G08...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000331

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000331, complete gene.

LocusTag

OS01G0896500

Ensembl Transcript ID

BGIOSGA000331-TA

Ensembl Protein ID

BGIOSGA000331-PA

Length

4298

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42617764..42622061

Sequence Coding Region

42622011..42622061,42621110..42621928,42620915..42621015,42620721..42620835,42620315..42620392
,42619922..42620014,42619749..42619832,42619570..42619665,42619317..42619379
,42619074..42619104,42618351..42618397,42618121..42618179,42617764..42617956

Genome Context

<gbrowseImage1> name=IndicaChromosome01:42617764..42622061 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:42617764..42622061 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGCTCCCCGTCTGCTCCGCCGCGCCCACCTGCTCCCCGCTCTGCCCGGTGACGTCGTCGGTGGCCCATGTCGTCGGCGCGCCGGCGCTACGAGGGAGGGTGGTGGAGGTGAGCGCGCTCAGGTCCTACGCCGATCCGCTCGTGGCGCGGCCGGTGCCCGACCGCCCGCTGCTCGCGGACTCATCCATCCTTTCCCCCTACTCCGCGTCACCCGACGACATCGTGCGGGGCCTCGCCGCCGCGGAGGTGCCCAGCGCCGACGCCACCGCAGCAGGTGACGCGCTCTGCTGCGGCGGGGTCGAGCCGGCGACGCTGACGGCCGTCTCCGACCTCGCCGCCACCACGGCCGACGCGGCCGTCACCGACGCCGCGGAGCGCGCCCTGCTTGACGCGCCGGTGCCCACCACGTTCCCGGCCGACGCGTCCGACGCCGAGGCCGCCTTCGCGAGGCTCATCGACTCCCTCGGGAAGAAGATCTTCCAGGCGGAGGACGCGCTCACCGAGGGGTACGACAAGCTGCGGCTGTCGGCGTACCAGTCGCTCAGCGCCTGGAGGAAGTCCGTCGACGGCGCGGTTGGTGGCCTCACGGCGTCGGTGGACGCCACCAAGAAGCAGGCCGCCGGTGGGGTGACGGACGCCTCCGGCGCGTTGCAGGACAAGGTGGCCGGAGCTGGCACCGTCGCCGTCGATGTCCTTAGGAAGGCTATTGTTGCTGCCGAGGATTCACTGGGCAGCGCAGCAACATCCATTGGATATTACTATGGATCAACCAAGTCGTCGTTGCCACCGAATGTGAAAGATTTGCTGAACTCCTCCGAGGAGAAAGCTAGTCTAGTTCTGAAACCGATTGGAGGTGCCCTTCAACAGGTATATGTAGTCGTCGAAGGTATTGAAAAGAATGTTGGTTTGGACCCAAGTGATCCTATTGTTCAATTGGCAGTTCTGCTTGGAGGTTCAACCACAATCGGGTTAACTTACTGGCTCTTCGCATACGGTGGCTATTCCGGAGACTTGTCACCCGAATCCACACTAGAGCTGTTGAGAAATGATGACAAAGCCGTACTTATTGATGTTCGGCCTGAGGACTTGAGAGTGAAAGATGGAATTCCGGATCTACGCCGTGCAGCTAGATCTAAATATGCAACTGCTGCTTCACCTGAGATTAAAGGTTCAGTAAAGAGGCTACTTAAAGGTGGAAGAGATGTTGATGATGCGTTGCTCGCAGTTATCATCCGCAACTTGAAGTTGGTCAAAGGTGATTCAAAGGTTATAATTATGGATGCTAATGGGAGCCGATCAAAGGCCATTGCTAGGTTACTGAAGAAGCTTGGTGTGCAGCGACCTTACCTTGTTAAAGGTGGTTTCCAATCTTGGGCAAAGAACCTTCGAGTGAAAGAATTGAAACCTGAGACCGCATTAACAGTAATAAATGAGGACGCAGAGGAAATCCTTGAAGGCATAAAGCCCACTCCAACACTTGTCCTTGGATCTCTCCTGGGCCTCTCAGCAGCAGCGTACGCTTTGCTAGAATGGGAAACGACTCTGCAATACATAGGTGTTCTAAGCCTTGGTCTGACTATCTATCTGCGGTTCTCTACGTACGAGGGTTCAGAGGATCTGGAGCAAGATCTAAAACTGCTGCTTTCCCCGTTAAGAGTAGGCGCGGAGGCGTTCTCGTGGGCGGCCAAGAAGCTGGAGCCAAGCAAGATTGGCTTGGCGACTTCCCCCTCCACGACGGCGGTCCAAGACCGGGTTCTCCAGGCCGCCGCGAAGCACGAGTCGCAGCCGTCTGACGCCGAGGCAGACAGTTTGGTCTCTGAAGCGTGA</cdnaseq>

Protein Sequence

<aaseq>MLLPVCSAAPTCSPLCPVTSSVAHVVGAPALRGRVVEVSALRSYADPLVARPVPDRPLLADSSILSPYSASPDDIVRGLAAAEVPSADATAAGDALCCGGVEPATLTAVSDLAATTADAAVTDAAERALLDAPVPTTFPADASDAEAAFARLIDSLGKKIFQAEDALTEGYDKLRLSAYQSLSAWRKSVDGAVGGLTASVDATKKQAAGGVTDASGALQDKVAGAGTVAVDVLRKAIVAAEDSLGSAATSIGYYYGSTKSSLPPNVKDLLNSSEEKASLVLKPIGGALQQVYVVVEGIEKNVGLDPSDPIVQLAVLLGGSTTIGLTYWLFAYGGYSGDLSPESTLELLRNDDKAVLIDVRPEDLRVKDGIPDLRRAARSKYATAASPEIKGSVKRLLKGGRDVDDALLAVIIRNLKLVKGDSKVIIMDANGSRSKAIARLLKKLGVQRPYLVKGGFQSWAKNLRVKELKPETALTVINEDAEEILEGIKPTPTLVLGSLLGLSAAAYALLEWETTLQYIGVLSLGLTIYLRFSTYEGSEDLEQDLKLLLSPLRVGAEAFSWAAKKLEPSKIGLATSPSTTAVQDRVLQAAAKHESQPSDAEADSLVSEA</aaseq>

Gene Sequence

<dnaseqindica>1..51#134..952#1047..1147#1227..1341#1670..1747#2048..2140#2230..2313#2397..2492#2683..2745#2958..2988#3665..3711#3883..3941#4106..4298#ATGCTGCTCCCCGTCTGCTCCGCCGCGCCCACCTGCTCCCCGCTCTGCCCGGTACGGAACAAACCACCACCGCGCGCCGCCGCCGTTGTCGTTCTGGTAGTCGCTAATGCTTCTGTTTGGTTGGCTTTGGCAGGTGACGTCGTCGGTGGCCCATGTCGTCGGCGCGCCGGCGCTACGAGGGAGGGTGGTGGAGGTGAGCGCGCTCAGGTCCTACGCCGATCCGCTCGTGGCGCGGCCGGTGCCCGACCGCCCGCTGCTCGCGGACTCATCCATCCTTTCCCCCTACTCCGCGTCACCCGACGACATCGTGCGGGGCCTCGCCGCCGCGGAGGTGCCCAGCGCCGACGCCACCGCAGCAGGTGACGCGCTCTGCTGCGGCGGGGTCGAGCCGGCGACGCTGACGGCCGTCTCCGACCTCGCCGCCACCACGGCCGACGCGGCCGTCACCGACGCCGCGGAGCGCGCCCTGCTTGACGCGCCGGTGCCCACCACGTTCCCGGCCGACGCGTCCGACGCCGAGGCCGCCTTCGCGAGGCTCATCGACTCCCTCGGGAAGAAGATCTTCCAGGCGGAGGACGCGCTCACCGAGGGGTACGACAAGCTGCGGCTGTCGGCGTACCAGTCGCTCAGCGCCTGGAGGAAGTCCGTCGACGGCGCGGTTGGTGGCCTCACGGCGTCGGTGGACGCCACCAAGAAGCAGGCCGCCGGTGGGGTGACGGACGCCTCCGGCGCGTTGCAGGACAAGGTGGCCGGAGCTGGCACCGTCGCCGTCGATGTCCTTAGGAAGGCTATTGTTGCTGCCGAGGATTCACTGGGCAGCGCAGCAACATCCATTGGATATTACTATGGATCAACCAAGTCGTCGTTGCCACCGAATGTGAAAGATTTGCTGAACTCCTCCGAGGAGAAAGCTAGTCTAGTTCTGAAACCGATTGGAGGTGCCCTTCAACAGGTAAATCAGTGGCAAGAATTCAGCTCTTGTTCTTGGTATGCCAGTTAGCATTTTACTGAAATTGCTCAATCTGTTGTTGCCTGCTATGATTCAGGTATATGTAGTCGTCGAAGGTATTGAAAAGAATGTTGGTTTGGACCCAAGTGATCCTATTGTTCAATTGGCAGTTCTGCTTGGAGGTTCAACCACAATCGGGTAAATGAGATTTTCTCTTTGCCATTTATAGCTGACATGTTCATACCAAATCTTCTTCTTAATCCCTGCTATGTTGCAGGTTAACTTACTGGCTCTTCGCATACGGTGGCTATTCCGGAGACTTGTCACCCGAATCCACACTAGAGCTGTTGAGAAATGATGACAAAGCCGTACTTATTGATGTTCGGCCTGAGGCAAGAGATTGTAAATCTCACTGGCCTATTCTTTCTTTGATGTCCGTTTTCATCTTTATCCGGTCCATGATATATTCTGCAAACCGTAGAAAAGATAATATTGTTTGTTAGCCACCTACATGCCTTTGCCAATGTAGAACAGTTTGTTCCTGCCAAGCCATTCAGTACAAACATTTTTAGTACTGTAGCACTACAACTCTTTGATGCGTTTCCTCTAGAGCATGAGAATATAAGCTTACATGCAGATGTACCTGAACTTCAAGTGTTTGATTCATCATTAGTATTTCAAAAGCAACTGTAACAGCTTATCATGGAATCCTTTTTGTAGGACTTGAGAGTGAAAGATGGAATTCCGGATCTACGCCGTGCAGCTAGATCTAAATATGCAACTGCTGCTTCACCTGAGGTGTGTCTTTGTTTGAACTTGGAGATCTGAAGTGCTACCAGCCATTGATTGCTGGACAGTTTATATGTCTACTTAACCTGAACTCAGTTCCAATTTTTTATGTATATCCGTGAGGATTGAAGTGTATGCAATGAGTTCTTTTTGTTGGAATAATGTTAGGAGTTGTTTTCATTCTAGAAAAAGAAAACTGAGAAGTAAACTTATGCAACTCTAGCAGCAGTCAGCCATTTCAATTTCAAACGGGTGAGAGTACAAAACTGATTTTGCTTACTGATATTAAGTTCACATATTTTTCTTTAGATTAAAGGTTCAGTAAAGAGGCTACTTAAAGGTGGAAGAGATGTTGATGATGCGTTGCTCGCAGTTATCATCCGCAACTTGAAGTTGGTCAAAGTATGATGTTTGCCTGAACTTGGATTTGATATCTTCAGTCTAAGATTTCTTCAAAATAAGTGAAGTATGTTTTCAATCTTCTTTTATAGGGTGATTCAAAGGTTATAATTATGGATGCTAATGGGAGCCGATCAAAGGCCATTGCTAGGTTACTGAAGAAGCTTGGTGTGCAGGTAAGTTCCAATGCAGTTTCTCCCAAAAATATTTCATTTTCACTGATCCGAGTCCTGCTTAAATTTGACTGTTTTGATGGCAGCGACCTTACCTTGTTAAAGGTGGTTTCCAATCTTGGGCAAAGAACCTTCGAGTGAAAGAATTGAAACCTGAGACCGCATTAACAGTAATAAATGAGGTAAAAATTCAGACAAAAACCTCATGTTTGAATGAAAAGAAGTGTATAAGGTTTTGGTCACAATTTTTCTTTGTTCCTTTCCAAAAATTTGTATGTATCAGCGTTGAATACTATGTAGAGGTAGCACTTTTTGTTATCACTATGTACTATTAACGTCGAAAACTCACAATATTGTTTTGAATGTATGCAGGACGCAGAGGAAATCCTTGAAGGCATAAAGCCCACTCCAACACTTGTCCTTGGATCTCTCCTGGTACATAAACATCAATTGGTCTCCTTTTACTTTCTTTTGCCTCTGTTGGCAGTCGGCACACTGTCCTGTTTCTCTTTGATTATTGGTTCCATTATATTTTTTTAAGAATGGTTCTTTTAAAAGTTGTACTGAATCACGACATTTCTCCCTTTGTGCATTTGAAGCCTTACGTGCAATATTTCTTCCTTTCTAAATTTGGTTCTTTTGTGCAGGGCCTCTCAGCAGCAGCGTACGCTTTGCTAGGTAAGAGGGGTAGGAAAGCATTAAGTGTGGTTATTGCATTGCTTTGCTATACATTAAATATATTGCAAGTCATATGATTTTCTGAACAGTATGTTCTCTTGTCAGAGATAAGGGCTCTTTCATATTCTCTCTCTTTTTTATTTTGTCCTGCTCTTTGGAGCTCCTAATGGTCTATAGGATTCACAGTTATGCAAAAAGAGGACAGGTTTTTAATCTCTCTCTTTTTTTTGGGCGGGCTGGCCGAAGGAGGCCGAGTAATTTCATTAAGATTTGGAAGAGTACAAGTTACAGAAAAACAGCAACAGAACGCTGTTGAAAATAGTAAATTTTTAATCTCAGTGTCAGTTTATCAACAGAAAGCGATGCTGCATTCACAAGTATGATATTTTAGGGAATTTGAGAAGGCATTTCTTAGTGGAGTGTTTGCAGGTCGCTTTAAACACCATTTTGAATAATTCATACCCTGGGAAGCTTACTGGATTACTAGGAGTCATGATTGTTTTTATTTGTCATTTTACCTAAATGTGCATAATTGATCTTTTTGACTGGATGCCCATCATGGGTATGTGCTATCGAACTTTTATAACCTAGTTAGGAAAAGCAGCTATAATTCAACCGTTTCAAACTTGTATTCATTTTGAATATGCGATTAATTGATATTGATAAACAACTGCAGAATGGGAAACGACTCTGCAATACATAGGTGTTCTAAGCCTTGGTCTGGTAAGTATTTTCCATTTTCAAACTGTCGGTACATATCATATATCTTCTGTTCAATTGCCTGGAAAGTAAAGCAATACAGCTTTGTGCCTTTTATATTACTACTCACTCCGATCCAAATATCATGGCAAGCGGAAACAACACAGTTTACATGACATTCTTCTACTCTTGTAGACTATCTATCTGCGGTTCTCTACGTACGAGGGTTCAGAGGATCTGGAGCAAGATCTAAAGTAAGTCATCCTAGTATCATCCGTTCTCGTGGTGTGCTTCTTTTCTGTAGTACAAATTTACAGCTCAGGTGCTCGAAACCTGCCATTTTTCCAACACATGACCAAAAAAAAAAACCATTGCAAATTTACAAGTTCCCCTTACTCCTCTCCTTGTGATTGCCTAGACTGCTGCTTTCCCCGTTAAGAGTAGGCGCGGAGGCGTTCTCGTGGGCGGCCAAGAAGCTGGAGCCAAGCAAGATTGGCTTGGCGACTTCCCCCTCCACGACGGCGGTCCAAGACCGGGTTCTCCAGGCCGCCGCGAAGCACGAGTCGCAGCCGTCTGACGCCGAGGCAGACAGTTTGGTCTCTGAAGCGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000331