BGIOSGA000344

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Revision as of 10:04, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000344| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000344, complete gene.| tag = OS01G08...")
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Gene Name

BGIOSGA000344

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000344, complete gene.

LocusTag

OS01G0892500

Ensembl Transcript ID

BGIOSGA000344-TA

Ensembl Protein ID

BGIOSGA000344-PA

Length

2898

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42491160..42494057

Sequence Coding Region

42493922..42494057,42493492..42493574,42493216..42493342,42492794..42492873,42492615..42492704
,42492406..42492530,42492267..42492327,42492133..42492186,42491956..42492033
,42491622..42491727,42491370..42491515,42491160..42491264

Genome Context

<gbrowseImage1> name=IndicaChromosome01:42491160..42494057 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:42491160..42494057 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGATCCTCCCGCGTCGTCGATATGCGGAGCCCTTGCTGCTCCTGCTCCTGGCAGCCGTTGCCCGCTCAACGGCAGCGGCACCGGACGTCGTCGAGCTGATCCTCCTCACCGGCGCTCAGGAGAAGGGCGCAGTGTGCTTGGATGGGAGCCCACCGGGCTATCACCTGCAGAGAGGCTTTGGCTCCGGTGAACACAGCTGGCTCATCTATCTTGAGGGAGGAGCCTGGTGCGACACCATCGAAAGCTGTTCCAACCGTAAAACGACCGAGCTTGGTTCATCCAAATTGATGGAAGCGCAAGAGTTCGAGGGGATACTCAGCAATAACCAAACAGTGAATTCTGATTTTTACAACTGGAACAAAGTTGTCATAAGGTATTGCGATGGAGCATCGTTTTCAGGGAATGCGGAGGCTCAAGATCAGGATGGGAGCACGCTCCACTTCAGAGGATTGCGCATCTGGCAAGCAGTTCTTGATGAGCTCATGGAAAAAGGACTTGCGAGTGCTAAACAGGCCTTACTTTCTGGATGCTCCGCTGGTGGTCTAGCTACACTACTGCACTGCAATGATTTTCATGCACGATTTCCTAAGGAGGTTTCAGCTAAATGCCTTCCTGATGCTGGAATTTTCCTTGATATTGAGGATTTATCTGGGAAGAGGCTCATGTGGTCCGTTTTCAATGGAACTGTTCAGCTTCAGAATGTTAGTGAAGTTTTGCCAAAGGATTGTCTTGCAAAGAAGGATCGAACAGAGTGCTTCTTGGCCACTGAGCTTGTCAAGAGCATCACCGCTCCCACGCTTATTGTGAACTCTGCCTATGATTCTTGGCAGATAAGAGATACTCTTGCCCCAGTGGGATCCTATCCTGGACAATCATGGTTGAATTGCACAAATGACATTGGAAATTGCAATTCCACACAAATGGAAGTACTCAATGGGTTCAGGAAGAAATTTGTCGATGGCGTAAAGGTTGTCAAAGACAAAAAGGACTGGGGTCTGTTCATTGATTCATGCTTCATGCACTGTCAAACAAAATACAGCATCTCATGGAGCTCACAGTTTTCCCCAGTACTTGGTAACATGACTATCGCCAAGGCTGTTGGGGATTGGTATTTTGAGAGAAGCAAAACAGTGAAAGAGATTGACTGCGAGTATCCATGTAATCCCACATGTAAACGTACGGGATAA</cdnaseq>

Protein Sequence

<aaseq>MPILPRRRYAEPLLLLLLAAVARSTAAAPDVVELILLTGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLIYLEGGAWCDTIESCSNRKTTELGSSKLMEAQEFEGILSNNQTVNSDFYNWNKVVIRYCDGASFSGNAEAQDQDGSTLHFRGLRIWQAVLDELMEKGLASAKQALLSGCSAGGLATLLHCNDFHARFPKEVSAKCLPDAGIFLDIEDLSGKRLMWSVFNGTVQLQNVSEVLPKDCLAKKDRTECFLATELVKSITAPTLIVNSAYDSWQIRDTLAPVGSYPGQSWLNCTNDIGNCNSTQMEVLNGFRKKFVDGVKVVKDKKDWGLFIDSCFMHCQTKYSISWSSQFSPVLGNMTIAKAVGDWYFERSKTVKEIDCEYPCNPTCKRTG</aaseq>

Gene Sequence

<dnaseqindica>1..136#484..566#716..842#1185..1264#1354..1443#1528..1652#1731..1791#1872..1925#2025..2102#2331..2436#2543..2688#2794..2898#ATGCCGATCCTCCCGCGTCGTCGATATGCGGAGCCCTTGCTGCTCCTGCTCCTGGCAGCCGTTGCCCGCTCAACGGCAGCGGCACCGGACGTCGTCGAGCTGATCCTCCTCACCGGCGCTCAGGAGAAGGGCGCAGGTATAGTGAATTATTGGTTTCTGATGTTAGAGACTAAGGCAATTATTGTAGTATGCCGACATCTTCACCAAGTGTCTTGCTAGTTTTGTAAGATTGTTCGCCTTCAACTACCGGGGTGTTAGTTTTGTATCTAGTTATCTCTTTGTTCGTTTTCTCTGATTTTCTCTCGATTCTGTTTCTATAAGTTGGTTGTAAAGATAAGGATTTACCATGTGTCCGTTTCTATATATATACTCGTTGTTTGTGATTAATCGAATTATACCATGTTAACTCAAATACGCTTTCGCTTGAACCTTGATAGCATCAAGTCCTCCTGAACTCATGAACTGTGTGTTGCATGCTTGCAGTGTGCTTGGATGGGAGCCCACCGGGCTATCACCTGCAGAGAGGCTTTGGCTCCGGTGAACACAGCTGGCTCATCTATCTTGAGGTGATCGATCGTGCATCCATCGATTTTCTCTTGTCGCAGATAGCTTTCAGTTCATGGTTGCCGTGACTTGTTTTTCTGCGTGCATGGCCGGATGCATGATTCTGTTTGTGCTGATTTTTGTACTGAAAAATGTGAAAAATGATGCTCAGGGAGGAGCCTGGTGCGACACCATCGAAAGCTGTTCCAACCGTAAAACGACCGAGCTTGGTTCATCCAAATTGATGGAAGCGCAAGAGTTCGAGGGGATACTCAGCAATAACCAAACAGTGAATTCTGGTACATGCAGATAACAGATGGTTCCTTATGTCCTGATAAGCCATTGCCTTTTCTTTCTTTTCTTTCTTTTTTTCTTTTTGCAAGGAACCTTTGGCTTGTATTTGTTTACTTATGAGCCAATTTATAAGCCAAAAAACTAAAGCCTACACATATAGACTTTACCATAAAAGAAAAAAAGTCAGCTTAGAAATCTAAACCAATAAACCTAATCTAAAATAAATGGGGCGTTCAGTGGTAAACATATATTTTTTCTTATTAACATTTAGAAGGCTTTTGATATATGTCCTTTTTTTAGGATTGAATACTTCATACTTTTACTAATTTTCAATAATTGTGTATTAGATTTTTACAACTGGAACAAAGTTGTCATAAGGTATTGCGATGGAGCATCGTTTTCAGGGAATGCGGAGGCTCAAGATCAGGTGACCATTTCTTTGTCTGAATTTTTTTTTAGATTCCAAATATTTCCAAAAATAAAACCAAGTATCCAACATTATTGGCGATGGTGTAGGATGGGAGCACGCTCCACTTCAGAGGATTGCGCATCTGGCAAGCAGTTCTTGATGAGCTCATGGAAAAAGGACTTGCGAGTGCTAAACAGGTTGCACGTTGTTGTTGTGTTTTTTTTCTTTTTGAAATATTCCCATTATCTTCTGTGTCAAATTCATTTTTCTACACGTTTCAGGCCTTACTTTCTGGATGCTCCGCTGGTGGTCTAGCTACACTACTGCACTGCAATGATTTTCATGCACGATTTCCTAAGGAGGTTTCAGCTAAATGCCTTCCTGATGCTGGAATTTTCCTTGATATGTAAGCCTCTGGATGTTAATCACCAGTATAACCTACTTGAGTGGTATACCTGTACTGAAATGGCAGTTTATGCTCCAGTGAGGATTTATCTGGGAAGAGGCTCATGTGGTCCGTTTTCAATGGAACTGTTCAGCTTCAGGTAAGCCTTAGACAAAGTGAAACTTATAAATTTTTTCTTATAATGCTTTTACTCAGTAATTGCTTGGAATTTTATCCCAGAATGTTAGTGAAGTTTTGCCAAAGGATTGTCTTGCAAAGAAGGATCGAACAGAGGTATTTCTCTGCAGTCCATAAAAGATCTCTTTTTGTTATGTTGTACTCCGTGTCTCCGTATGTTACTGAGTTCATTTACTGACATGTCACTGTTCCCAGTGCTTCTTGGCCACTGAGCTTGTCAAGAGCATCACCGCTCCCACGCTTATTGTGAACTCTGCCTATGATTCTTGGCAGGTAACTTTAATCTTTATGTTTTTTGTTCCTATGACCATGAGTAATGAATATATTTTTGAGTGTGGTATTGTAGTTGTGATTTTTGCTCGGTTTATACTAAACTGAGCATCGTAAGGTTTGGTCATGTTTACTTCTTAAAGTGGGACACCTTTTTTTTTTTATATAAAACGTCGGCAATAGCCTGACTATTAAAAAAAAATATTTTTCAGCTATGTTTCTTGTCTGCAGATAAGAGATACTCTTGCCCCAGTGGGATCCTATCCTGGACAATCATGGTTGAATTGCACAAATGACATTGGAAATTGCAATTCCACACAAATGGAAGTACTCAATGGTTTGTTTAACTTGTCAATCTATTCGATTCCTCCATTCTACGCTGTAACTATCCTGTTTCTTTTATAACGCAAAAGTACATTTGTTTTTTCTCCTTCCGTGTTTAGGGTTCAGGAAGAAATTTGTCGATGGCGTAAAGGTTGTCAAAGACAAAAAGGACTGGGGTCTGTTCATTGATTCATGCTTCATGCACTGTCAAACAAAATACAGCATCTCATGGAGCTCACAGTTTTCCCCAGTACTTGGTAACATGGTGAGGTTAAATCACTGAATAGTGTTCAGTTCAGAAAAAAAAAACATTGAAATTCCATAAGACTGTTCTGATTGATTTGTTTTGATTTACACTTGTGTGGAGCAGACTATCGCCAAGGCTGTTGGGGATTGGTATTTTGAGAGAAGCAAAACAGTGAAAGAGATTGACTGCGAGTATCCATGTAATCCCACATGTAAACGTACGGGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000344