BGIOSGA000345

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Revision as of 10:04, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000345| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000345, complete gene.| tag = OS01G08...")
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Gene Name

BGIOSGA000345

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000345, complete gene.

LocusTag

OS01G0892400

Ensembl Transcript ID

BGIOSGA000345-TA

Ensembl Protein ID

BGIOSGA000345-PA

Length

2969

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42484545..42487513

Sequence Coding Region

42487345..42487513,42487162..42487244,42486819..42486945,42486594..42486673,42486395..42486484
,42486116..42486240,42485976..42486036,42485648..42485701,42485477..42485554
,42485000..42485105,42484764..42484909,42484545..42484655

Genome Context

<gbrowseImage1> name=IndicaChromosome01:42484545..42487513 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:42484545..42487513 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCAGCAGCAAGCTCCGGTCGCCGGTGCTCCCGCGCCGTCGACTTGCGGAGCCCTTCCTTCTGCTGCTCCTGCTCCTGCTCCTGGCCGCCGTAGCCCGCCCAACGGCGGCGGCGGACGTCGTCGAGCTGACCCTCCTCGCCGGCGCTCAGGAGAAGGGCGCAGTGTGCTTGGATGGGAGCCCGCCGGGGTACCACCTGCAGAGAGGCTTCGGCTCCGGTGAGCACAGCTGGCTCGTCTTTCTTGAGGGAGGAGCCTGGTGCAACAGCATCGAAAGTTGTTCCAGGCGCAAAATGGGCGTGTATGGTTCATCCAAATTCATGAAAGCAGCAGAGTTCAATGGAATACTCAGCAATGACCAACAACTGAATTCTGATTTTTATAACTGGAACAAAGTTGCCATAAGGTATTGCGATGGGGCATCGTTTTCTGGTGATGCGGAGGCCCAAGATAAGGATGGGAGCACACTTCATTTCAGGGGATTGCGCATCTGGGAAGCAGTTGTTGATGAGCTCATGGGAAAAGGACTCGCAACTGCTAAACAGGCCATACTTTCAGGATGCTCTGCTGGTGGTCTGGCTGCACTACTGCACTGCAATGATTTTCACGCACGATTTCCAAAGGAGGTTTCAGCTAAATGCCTTCCTGATGCTGGATTTTTCCTTGATGTTGAGGATTTATCTGGCGAGAGGCACATGTGGTCCGTATTCAATGGAACTGTTCATCTTCAGAATGTTAGAGAAGTTTTGTCAAAAGATTGTCTTACAAAGAAGGATCCAACAGAGTGCTTCTTTCCTGCTGAGCTTGTTAAGAGCATCACCGCTCCCACGCTTATTCTGAACTCTGCTTATGATTCTTGGCAGATAAGGAATGCCCTTGCTCCAGATGGATCCTTTCCTGGACAGTCATGGTCCAGTTGCAAAACTGACATTCGGAATTGCAGTTCCACACAAATCCAAGTATTCAATGGATTCAGGAACAAATTTGTCGATGATGTAGAGATTGTCAAAGACAAAAAGGACTGGGGACTGTTCATTGATTCATGCTTCACCCACTGTCAAACGCCATTCAACATCTCATGGAGCTCACAGGCCTCCCCAGTGCTCGGTAGCAAGACTGTTGCCGAGGCTGTTGGGGATTGGTATTTCGAGAGAAGCTATGAAGTGAAAGAGATCGACTGCGAGTATCCTTGTAACCCCACATGTAGCAGCCAGCTGCCTACATGA</cdnaseq>

Protein Sequence

<aaseq>MATSSKLRSPVLPRRRLAEPFLLLLLLLLLAAVARPTAAADVVELTLLAGAQEKGAVCLDGSPPGYHLQRGFGSGEHSWLVFLEGGAWCNSIESCSRRKMGVYGSSKFMKAAEFNGILSNDQQLNSDFYNWNKVAIRYCDGASFSGDAEAQDKDGSTLHFRGLRIWEAVVDELMGKGLATAKQAILSGCSAGGLAALLHCNDFHARFPKEVSAKCLPDAGFFLDVEDLSGERHMWSVFNGTVHLQNVREVLSKDCLTKKDPTECFFPAELVKSITAPTLILNSAYDSWQIRNALAPDGSFPGQSWSSCKTDIRNCSSTQIQVFNGFRNKFVDDVEIVKDKKDWGLFIDSCFTHCQTPFNISWSSQASPVLGSKTVAEAVGDWYFERSYEVKEIDCEYPCNPTCSSQLPT</aaseq>

Gene Sequence

<dnaseqindica>1..169#270..352#569..695#841..920#1030..1119#1274..1398#1478..1538#1813..1866#1960..2037#2409..2514#2605..2750#2859..2969#ATGGCGACCAGCAGCAAGCTCCGGTCGCCGGTGCTCCCGCGCCGTCGACTTGCGGAGCCCTTCCTTCTGCTGCTCCTGCTCCTGCTCCTGGCCGCCGTAGCCCGCCCAACGGCGGCGGCGGACGTCGTCGAGCTGACCCTCCTCGCCGGCGCTCAGGAGAAGGGCGCAGGTATATCTTGCCTGCACCTGCAGTGAACTTCAGGTTCTTGAATCTTTGATGGGCATCAAGTTCTCCTGAACTCAAGAACTGTGTTGTTGCATGCTTGCAGTGTGCTTGGATGGGAGCCCGCCGGGGTACCACCTGCAGAGAGGCTTCGGCTCCGGTGAGCACAGCTGGCTCGTCTTTCTTGAGGTGATCGATCATGCATCCATCGATTTTCTCTCATCGCAGATTGCTGCTTTCTGTTCATGGTTGCTTCAAACATTTACATGGACTCTTTTGCAGCATGAGAATGCCTGACTGGATGATGCTTAATTAGTACTGTAGCATTGATCAAGTATTAATCAACACATGCATCATCCAAATTCATGACTGTTTTTTTTTTTTTTTTGTTCTGCAAATGCTCAGGGAGGAGCCTGGTGCAACAGCATCGAAAGTTGTTCCAGGCGCAAAATGGGCGTGTATGGTTCATCCAAATTCATGAAAGCAGCAGAGTTCAATGGAATACTCAGCAATGACCAACAACTGAATTCTGGTACATGCATTTATCTCGAAAAAAAATTCTGGTACATGCAGATAACAGATGTGGGTCCTTAATTTTAGTCCCTATACTAATTTCCTTTACTAATGCTTTGGATAATTTTGATGTCCTTTTACTAATTTCAATCATTGTCGATTAGATTTTTATAACTGGAACAAAGTTGCCATAAGGTATTGCGATGGGGCATCGTTTTCTGGTGATGCGGAGGCCCAAGATAAGGTGGATATTTTTAATTCTAAAAGTGATTTTTGAAGTCTCTATCTTGTTCTGTCCAACACTGTAATCCCTAAAAAATAAGACCTATCCGACATTATTGACAACGGTGTAGGATGGGAGCACACTTCATTTCAGGGGATTGCGCATCTGGGAAGCAGTTGTTGATGAGCTCATGGGAAAAGGACTCGCAACTGCTAAACAGGTTACACGTTGTGCATTGAGTTTTTAATTCTGTCTGAACAAGAATACCTGGCTGGTTTCATATGGACAAGAATCTTTCGTGCTTCATTCTGGCACTCTCATGAGTCTCATCAAGAACCATATCATTTTTATTTTCATTTTTCTACATTTTTCAGGCCATACTTTCAGGATGCTCTGCTGGTGGTCTGGCTGCACTACTGCACTGCAATGATTTTCACGCACGATTTCCAAAGGAGGTTTCAGCTAAATGCCTTCCTGATGCTGGATTTTTCCTTGATGTGTAAGCCTCTTGTAATTAATTAGCAGTATAACCCACATATTGTGTACTACTTGCACTTAAGTGCCAGTTTCTGCTCCAGTGAGGATTTATCTGGCGAGAGGCACATGTGGTCCGTATTCAATGGAACTGTTCATCTTCAGGTAAGCTGCTGAACACTTCAACATATTTAAACCTAGAAAAAACGTTATTTTTCGTAACTCTAAGAAGGGAGCTCGGCAATTTATTCCAAATGTTTTGGTGGTTTGTTCTGTTCTGTACTTATGAATACCTCAGTGAGATCTGGTCATCTGGCAATGGTTGTCCTTTTCTTTTCACGTGATGTTATCATGCCAGCTTGCCCGTTTGTCTCATCTGATCGATCCGTATTCAGCTTTACAATCTTACTCAGTTATTGTTTTTGAATTTTTATCCCAGAATGTTAGAGAAGTTTTGTCAAAAGATTGTCTTACAAAGAAGGATCCAACAGAGGTATTTACCTGTAGTTTAAATCAGCTGTATTCCATAAAAGATCTCTCCTTGTTATGGTGCTAAGTTCCTTTACTGACGTATTGCTGTTCCCAGTGCTTCTTTCCTGCTGAGCTTGTTAAGAGCATCACCGCTCCCACGCTTATTCTGAACTCTGCTTATGATTCTTGGCAGGTACTAATTTTGTTCTTTATATTTGTTCCCATTAATATATATAGTTCTTTCCTAAAAAACACTTAGGCTGTGTTTGGCATATCTGGTTCTCAACCGGAACAGTACGCACGGAAAACGGAATGGTCCATTGGCACGTGATTAATTAAGTATTAGCTTTTTTTTTCAAAAATGGATTAATTTGATTTTTTAAGCAACTTTCATATAGAAACATTTTGCAAAAAAACACACCGTTTAGTAGTTTGAAAAGTGTGCGCGCGGAACACGAGGGAGAGGGGTTGGAAACCCTGAGCAAAGAACACAGCCTTAACTTTTTCCAGAGGAATTCAACAAGTTAAATCCTCTCACTGTTTTACTATGCTTCTTATTTGTAGATAAGGAATGCCCTTGCTCCAGATGGATCCTTTCCTGGACAGTCATGGTCCAGTTGCAAAACTGACATTCGGAATTGCAGTTCCACACAAATCCAAGTATTCAATGGTTGGTTTAGCTTGTCCATCTGTTTGGTTTCTTCGGTAACTGTCCTGTTTTTAATAACTCAGAAGTAAAATTTATTTCTCCTTGATGTAGGATTCAGGAACAAATTTGTCGATGATGTAGAGATTGTCAAAGACAAAAAGGACTGGGGACTGTTCATTGATTCATGCTTCACCCACTGTCAAACGCCATTCAACATCTCATGGAGCTCACAGGCCTCCCCAGTGCTCGGTAGCAAGGTGAGGTTAAAATCACCGGACTGTCCTAAGTTCAGAAAAGAAAATCACTGAATTGTAAGACTGTAAAAAATGGATTGATATGTTTTTATTTACACTTGTGTGGAGCAGACTGTTGCCGAGGCTGTTGGGGATTGGTATTTCGAGAGAAGCTATGAAGTGAAAGAGATCGACTGCGAGTATCCTTGTAACCCCACATGTAGCAGCCAGCTGCCTACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000345