BGIOSGA000362

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Revision as of 10:04, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000362| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000362, complete gene.| tag = P0408G0...")
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Gene Name

BGIOSGA000362

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000362, complete gene.

LocusTag

P0408G07.40

Ensembl Transcript ID

BGIOSGA000362-TA

Ensembl Protein ID

BGIOSGA000362-PA

Length

6547

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42175464..42182010

Sequence Coding Region

42181651..42182010,42180961..42181036,42176353..42176483,42176179..42176249,42175967..42176048
,42175464..42175484

Genome Context

<gbrowseImage1> name=IndicaChromosome01:42175464..42182010 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:42175464..42182010 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCGAGCCCTCCTCCGAATAACCCGCAGCTATTGCCCGCTCTCCCCGTCCCCACGCCTCCCGCCGCCGCTCCACCACCGCGGCGCCGCGCCTCCTCTCCGCTTCCGCTTCCTCTCCCTCTCATCTTCCTCGGCCCCATCCTCCTCTGCTGCGGCGACCGCGAATAGCTCGGATGGTCCCGGTGAGAAGGGCGGCGGCGGCGGCGGGTGGGATGACTACCTGGGGATGAGCGACGACGAGCTGATGGGGCAGTGCGAGATGGGCACGTTCAAGGCGTCCGGCCCCGGCGGCCAGCACCGCAACAAGCGCGAGTCCGCCGTCCGCCTCCGCCACCGCCCCACTGGCATCATCGCCCAGGCTGTGGAGGATAGATCACAGCATATGAATCGAGCATCTGCCTTGTCTCGGCTTCGAACCTTGATTGCTCTCAAAGTCAGAAAGCCGATAAACCTCGAGGACTACACTCCTCCAGTTGAGCTTCTTCAGATATTACCCCTGAAGTCTACAATCCGAGGAAAGGATATTGGCCCCCAAATTGGTCCAAATAACTCGAAATTCGCCCCAGGAATGCAAGCTTTACTAGATCTTCTTTTTGCTGTTGAAGGCTCAGTGTCAGAAGCAGCAAAACTTTTGGGCCTAAGCACTGGTGCTGTGTCAAGGTTGATTCTATCAGATGATTCACTTCGAGCAGCTGCAAATGAACTGCGAGCTGCCAAGGGTCTGAAGCCACTAAGATGA</cdnaseq>

Protein Sequence

<aaseq>MARALLRITRSYCPLSPSPRLPPPLHHRGAAPPLRFRFLSLSSSSAPSSSAAATANSSDGPGEKGGGGGGWDDYLGMSDDELMGQCEMGTFKASGPGGQHRNKRESAVRLRHRPTGIIAQAVEDRSQHMNRASALSRLRTLIALKVRKPINLEDYTPPVELLQILPLKSTIRGKDIGPQIGPNNSKFAPGMQALLDLLFAVEGSVSEAAKLLGLSTGAVSRLILSDDSLRAAANELRAAKGLKPLR</aaseq>

Gene Sequence

<dnaseqindica>1..360#975..1050#5528..5658#5762..5832#5963..6044#6527..6547#ATGGCTCGAGCCCTCCTCCGAATAACCCGCAGCTATTGCCCGCTCTCCCCGTCCCCACGCCTCCCGCCGCCGCTCCACCACCGCGGCGCCGCGCCTCCTCTCCGCTTCCGCTTCCTCTCCCTCTCATCTTCCTCGGCCCCATCCTCCTCTGCTGCGGCGACCGCGAATAGCTCGGATGGTCCCGGTGAGAAGGGCGGCGGCGGCGGCGGGTGGGATGACTACCTGGGGATGAGCGACGACGAGCTGATGGGGCAGTGCGAGATGGGCACGTTCAAGGCGTCCGGCCCCGGCGGCCAGCACCGCAACAAGCGCGAGTCCGCCGTCCGCCTCCGCCACCGCCCCACTGGCATCATCGCCCAGGTGAGCCTGAGCCTCCGGTTTTCCCTTTCACCCGTCGATTTGCTTCCGTTTCCCTCCCCAATTCGTTGCATTAGTTTTACTGCTCTTCTTGTTGAAGCTGCCAGAACGTGCAGTTCAGTGTTTTTACAGCACTGTTGCCTCTGAATTCTGAAGAAAATGAAGGGTGTTTGTATATACATTGGCTATATGAAAAGATTAAACTCGATAGTGCTTACACATTCACAGCATACGGCTGATAGTTTGTTCTTTGTAGTAGTTGGTTGATCAAGATCGATTTATAATCCTTCCAATTGACGATTTGGTGAAATTCATCAATCTGTTGGGTTTAAGCACATTCATCATATCCACTGAGCTTAAATGAACATTTTCGTGTAATGCTTCTTAAGTTCTTGTCGTGAACATACGGATATGCTGTTTTCTCCATGGATGCGAAATGTTATCTCTATGGATGCGAAATGTAGCTTATTGTATCAATGTAATCGCCAGAACATTTTACTTGAGATTAAATGCCTAATTTGTGTCCTGGTTATCCATGTAATCCATGGCATGCAATGTTGATGTAAACGAACCAGCTTCTTTCCTTTCTTCTCATTATGGATTTATGGTTTTCACAGGCTGTGGAGGATAGATCACAGCATATGAATCGAGCATCTGCCTTGTCTCGGCTTCGAACCTTGATTGCTCTCAAAGGTAATTTTGTTATATTTCAAAAAGTTATGCATGTGTGCTGGGTAGATAGTTATACACTGACAAATTTTGCTACCGGACATCGTGACTTCAAGGTTTTAGCTGCAGGACACGGAACGAAGTGACTTTTGGGGAAAACACTCCCAAAAGTTAGATATTTACTGGTGGACACCGCACCCATTAAAATAATAATTTCCGGTTGAAGAGGAGAGAGTAATCGTGTGAAATATCAAAAATGAGAGAAATCATGTGAAATATCAAAAATGCCCTTGGGCCTAGCTCTCCTATATCTCTTCTCCCGCTATCCCCTCCTCTTCTCTCTCTCATCTCACATGTCAGCGACAACGGAGGCATGCGAGGTCCAGTGGCGGCAGGAGAACTAGGGGTAATGACCTAGAGAAATAGATGATCAAAATGTCACATTAGGTCATTTGCATTTAGACTCGTTTTCAATTTATATACATTTGAGATTGTTTCTGTCCAGGCCGGTCTGATCAATGGCATTGAGCCGGTCTGACCGGAGTGTAACGGCCGGTCTGACCGCCGGGTAAACCTCGGTCTGACCGGCCGCCTGGTGGCTGGCGGCTGTGCTCTGGGATGGCGATCCAGAGCCGCCAGGGCCGCAGCCGGTTAGACCGAGCTGGTGGCGGTCTAACCGAGCCGAGGCCGGTCTGACCGACCGCCCTATGGTGGTCTGACCGGCTGGGCTGAGGGGGCTCAATGATTGCCCTGTAACGGCTAGTTTTCTAACTAGTCGTTACAAAATAGTCTGGTCTGACCGGCCATACAATGACGGTCTGACCGGCAGTTCACTGAGTTGGGGGATTTCACCCCCAACGGCTAGTTTTGGTGGGTGGGAGTATAAATACTCCCCCACTAGCAGCAAGGGGACTCTCTCTTGGCGCTTGCTTCACTTGCATACACCCCTTGCACACTCTCACACTCTCGAGGGCTTGTGTTCATCTATTTAGTGTGTTTGAGAGATTGTTGAGCCAAGAGTCAAGTGCATTGCTTTATTGTAGAGCTAGTGACACTTAATCATCTCCGAGCCGCGTCATTGCTTGTTACTCTTGGAAATTGGCGCCTCCTAGACAACTTGTGGAGGTGTTGCCCGGTGACCTCTCTGAGGAGATTGTGGAGGAGGCCCGACGCCGATTGTGAGTGGTTTGGAGTTCACTACCTTCGGAGTGAAAGAAGAACTACCCTAGTGATCAAGGCTAGGGTAGTCCTCTCCGTGTGTCGGCTCCCACCTTGCCCACCCCTTGACGAAGGGGGCGTGCGGTGGCTTCGTGGTTGAGCGGTGGAGTTGGGCTTGCCTCAACGGGGATTAGGAAAGCGGCGAGTCTCCGGACCTCAGTGAAAAATTTCTTGTCTCTTGTCTCATTTATTTGTTGCATTTACATTTGTGCAATTTACATTCATAGAGACATATTTGAGCCCATATCACCTTAGGATTGCAAAACTTAACTTAGATGTGTGATTTACTTTCCTAGAGATATATTTAAGCCCATATCACCCTAGGTTTGCAAAACTTAACTTAGTTGCTTAGTTAACCTTGCACCTCTCCTTGTCTAGCAACTTAGGTTAGTTTTGTTTAAGTGCCATTTAGTTTTAAATCGTCTATTCACCCCTCCTCTAGTTGACATCTCGATCCTACAAATGGTATCAGAGTTCGGTTTCTCTTGATCGGGCTTCACCGCTTAGAGAGAAGATGTCGAACGAGGTGAACCATGTAGGGAAGGCTCCCATGTTCAATGGCACAAATTACTCCACTTGGAAAATTAAAATGTCTACTCACCTTAAGGCTATGAGTTTCCATATTTGGAGTATTGTGGATGTAGGTTTTGCCATCACTGGTAGCCCCTTAACGGAAGCTGATCACCGCAACCTCCAACTCAACGCTCAAGCCATGAATGCATTGTTCAACTCTTTGAGCCAAGAGGAATTTGATAGAGTGAACAACCTTGAGACCGCATATGAGATATGGAACAAGTTGAGTGAGATTCATGAGGGCACTAGTGAGTACAAGGATGCAAAGCTTCATTTCCTCAAGATCCAATATGAGACGTTTGCCATGTTGCCTCATTAGAGTGTCAATGACATGTATAGGATGTTGAATGCGATAGTCAATGATTTCAAGGGGCTTGAGGCAATCTACTCCGACATTGAGGTGGCTCAAAAGATGCTATGGGCTCTATCGGACAAGTATGAGTACTTAGTCACCTTCGTCATCAACTCCGACATGTCAAGGATGACACCAGCAAGCCTCTTGGGGAAGATCAAGACCGATGACATGTACAAGTTGAAGAAGAAGAAGATGGAGGAAGCCTCTCCATCCAAGAAGTGCATTGCTCTCCAAGCCGAAGTGGAAGACAAGGGCAAGAGCAAGGTGAATGAAGCAAATGATGACTAGCAGGAAGAGATTGCTCTTCTTGCTAGAATGTTCAATGATCTATTAGGAAGAAATGAGAGAGGAAAGGGCTCTAACTCCAATAGAAGAAGAAATAGGAGACCCAACAAGACTTTCTCCAACTTTAGATGCTTTGAGTGTGGTGAGAAGGGACACTTTGCTTCCAAGTGTCCTTCAAAGGATGATGATGGAGACAAGTCATCCAAGAAGAAGAGTGGAGGCTACAAGCTCATGAACAAGCTTCAGAAGGAGAGAAAGAAGATTAAGGCATTCATTGGGCAATGGGACTCAAATGAAGAGAGCTCCGCTTCATCCGAGTTCGAAGCAGAAGATAGTGATGATGATGCAAGCTCCAAGAAGAAGAAGATGGCCGTAGTTGCTATCAAGGAAGCTCCATCACTCTTCGCTTCACTTTACCTCATGGCAAAGGGTTCTTTTAAGGTAACATCTCTTAGTGATAGTGAAAGTGATGATGATCATGATGATGCTTCCTATGATAGCTTGTGAGTATGATCATGCGTAGTGAGAAGGAGATTGTCAAGTTCAAGGCTCTAAAGAAGGATCATGCTTCTTTCGAGGTCTTGTATGAGGAGCTAAAGACTTCACATGAGAGACTCACCATTTCTCAGGAGAAGATTAAGGAAGCTCATGACACCCTTCTTTCCATTACTCAACATGGAGCTCATATTGATGTTGGCATATCTTGTGACTTGCTTGATGATAGTGCTACCTGTCATATTACTCATGTTGCATCATCTAGCATCTCTACTTCTTGTGATGATCTCAAAATTAGCCGTTGGGGGCGAAATCCCCCAACTCTGTGCACTGCTGATTAGACTGCCATTGTATGGCCGGTTAGACCAGACTATTTTGTAAGGGGCAATTATTGAGCCCCTTCAGACTAGCCGGTCAGACCACCATAGGGCGCCACCAGCTCGGTCAGACCGGCTGCGGCTCTGGATCGCCATCCCAGAGCACAGCCGCAAGCCACCAAGGGGCCAGTCAGACCGGGGTTTACCTGGCGGTCATACTGGCCATTACACTCCGGTCAGACCGGCTCAATGCCATAGGTCAGACCGGCCCTGGACAGAAACAATCTCAAATGTATATAAATTGGAAACGAGTTTAAATGCAAATGACCTAATGTGGCATTTTGATCATCTCTTTGTCTATAGGTCATTACCCCTCTTAATAGTACGGCGAAGCTAAAAATAAACTAGCAAATTTTGATCGCCCAACTCCTTGATCAATTTAAAATTAAAACACTAGTTTACCGTCTTCTTTTCCTTTTGCTTTGCGCCATAAATTTTAGTCCACGATAATCATCCATGAGCACACATTATGTGAACTTAACTTAAAATATAGAACGGTTAGTCCACAATTAGCGCTTGTCATTAATTACCAAAATTATCAACGGGCCTAGATGCTTCAGCCGCCGTCGTCATTGACATGTGAGATGAGATAGGGAAGAGAAGGAGGGGATAGAGAGAAGAGAGATAGGAGAGCTGACATGTGGGCCCAAGGGCATTTTTGACATTTCACACGATTTCTCTCTCCTCTTCAATCGAAAATTATTATTTTAATGGATGCGGTGTCCACAAGCAAATATCCAACTTTTGGTAGTGTTTTCCCCCAAAAGTCACTTCGTGCCGTGTCCTACAGCTAAAACCGCGAAGTCACGATGTCCTATAGCAAAATTTGCCTTATACATATACACACATATCCAGCACTAGAAAGTAAACCAAACAACTCAGAAGTCGGAACGCATATTTTTGTTTGTTGCAAACCTTTTCATCATAGGCCAGGAATCCAATTACATAAGCACTAGAAAGTAAACCAAACAACTCAGAAGTCGGAACGCATATTTTTGTTTGTTGCAAACCTTTTCATCATAGGCCAGGAATCCAATTACATAAGGGTATGGTATAGTGTATTGAAAATGGTTAATCTTGATCAGGTTTCACGTTGATATAGTTATAGTACTGCTAGTAAGTGATGTTTAATATGCTTGAACTCCTTCAATTTTCATGCTGGCATAGACACTTGGGTATTTATAAACTTGCTTTTCAGTCAGAAAGCCGATAAACCTCGAGGACTACACTCCTCCAGTTGAGCTTCTTCAGATATTACCCCTGAAGTCTACAATCCGAGGAAAGGATATTGGCCCCCAAATTGGTCCAAATAACTCGAAATTCGCCCCAGTATGTGTCTGATCTTTCCTTGGTATGCTAAAAGATACTCAATTATTGACCACTGTATTAAAATTTTGAATGCTTACTTTCCATTTTCTCTCCTGGTGAGCAGGGAATGCAAGCTTTACTAGATCTTCTTTTTGCTGTTGAAGGCTCAGTGTCAGAAGCAGCAAAACTTTTGGGGTAATCCTTGAAGTTCTGAATTTTATCCGTGAATTGAGCTAAAATTTATAGTTTATCTTCTATGCCGGCTCACAGCACGTACGTTCCATTCTGTTATTTACAATTAAGCCATACTAATTATGTTTTGCAGCCTAAGCACTGGTGCTGTGTCAAGGTTGATTCTATCAGATGATTCACTTCGAGCAGCTGCAAATGAACTGCGAGCTGCCAAGGTAACTCTGCTGCAAATAAGTGGCTACACCTGTCTATGTTCATTGAATAGAGCATAACACCCAGCACATTCCAACATATGCTTCTGGATTCACCAATCATGTAAACCAGAGTTGAACTGTGAGCTCATTGCCTGTTTGGCACAGCTCCAGTTCCAGCTCCACCCCTCCTGGAGCTGGAGCTCAGCCAAACAATTTCAGCTCCACCAAAACTGGGAGTGGAGTTGGGTGGAGCTCTCTCACAAAATATATTAGAGTTGTGGAGCTGGGTTTTGGCAGCTCCACAACTCCACTCTAGACTCAACTCCTGGAGTTATATTTAGGAGTTGGAGCTGTAGCAAACAGGCCCTAAAGCCCTGAACTCTAAGACAACTGCTGATCCATTACATGATGTCCAATATCACAAATTCTTTACAATTTTATAGTTAGAAAAATATTTCACCATAACCATGAATCTCTCTCTGCCTCCGTATGTGCCTGTGCAGGGTCTGAAGCCACTAAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000362