BGIOSGA000375

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Revision as of 10:04, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000375| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000375, complete gene.| tag = OS01G08...")
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Gene Name

BGIOSGA000375

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000375, complete gene.

LocusTag

OS01G0883900

Ensembl Transcript ID

BGIOSGA000375-TA

Ensembl Protein ID

BGIOSGA000375-PA

Length

4297

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:42004133..42008429

Sequence Coding Region

42007425..42008429,42007173..42007322,42006302..42006572,42006107..42006217,42005462..42005636
,42005101..42005373,42004531..42004725,42004133..42004349

Genome Context

<gbrowseImage1> name=IndicaChromosome01:42004133..42008429 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:42004133..42008429 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGCAGGCGGTCGTCGCCGTCGTCGTCGCTCTGCACGACGACCACCGTCGTCGTGTTCGTGGCGCTCTGCCTGGTCGGCGCCTGGATGATGACGTCATCCACCATCTTCCCGCTGGAGATAACCTCGAATAAGAAGGCGGCGGTGAAGGAGCAGCCGGCGAGAGTTAACTACGGCGCGTCCGAGGAGGCAGCGGCGGCATCCGGCAACAGTGCTGAAGGTGTGGACAGGTTTGGGGACACGGACAACAACGATAATGCGGTTCCGGAGGAGCCGAATAACACGGTCCCTTCTGAAGAAGAGAAGTTCAGTGAGAACACAGTGGAGAAGCCAGTGGAGAGCAGTGAAGAGAAGGCGCCACCGAAAGAAAAGGAGGAGAGTAAGGATACATTTGATGATGCAAATGGGAAAACAGAACACTCGAGCGCCAAGGAGGATGGGGATTCTGAATCAGGATCTGGGCAGTCGGATGGTTCAAAGAATGGCGACGAGGAGGAGAAGAGTGAGGAGAAGAAAGATGATGAGCAATCTGATGGTGAGAGGAAAGATGATCAAGAAGAGAAGGCTGAAGGCAGTGGCTCAAAGGACACGACTGACCAGCCACAAATTGAGGAGACAGTGGATGAAAGTGGGGAGAAGGGTCAGGGTGCAAAGTCCAATGAGGTATTCCCTGATGGGGCTCAATCAGAGCTTCTAAAGGAGTCAAACACCGAGAACGGGTCATTTAAAACACAGGATGCAGAGTCAAAGAATGAGAAGGAATCTCAAGCAGCATCAAATTCTTCAGATGATGAAACCACATATAACTGGAAGTTATGCAATAACAATGCTGGAACAGATTACATACCTTGCCTCGACAATGAGAAGGCTATCAAGAAGCTTCGAACCACCAAACATTATGAGCACCGTGAGAGGCATTGCCCTGTGGAGCCTCCTACCTGTGTTGTTCCACTTCCTGAAGGATATAAACGCCCAGTTGAGTGGCCCACGAGCAGGGACAAGGTGTGGTACAGCAATGTCCCCCACACTAAGCTTGCTGAGTACAAGGGGCACCAAAACTGGGTTAAAGTTTCTGGGGATCATCTCCTATTTCCCGGGGGTGGCACTCAGTTCAAGAATGGTGCACTTCACTACATTGATACTATTCAGCAGGCATTACCTGATATTGCATGGGGCAAACGAAGCCGTGTCATTCTAGATGTTGGCTGTGGAGTTGCTAGCTTTGGAGGGTATATGTTTGAGAGAGATGTACTCACGATGTCATTTGCCCCAAAAGACGAGCATGAAGCTCAAGTACAGTTTGCACTTGAGAGAGGTATTCCAGCAATATCAGCTGTCATGGGCACCAAAAGGCTCCCATACCCCAGCAGGGTCTTTGATGTCATTCATTGCGCTCGCTGCAGGGTCCCTTGGCACATTGAAGGTGGCATGCTATTGCTGGAACTGAACCGCCTATTACGCCCTGGTGGTTACTTCGTCTGGTCTGCCACTCCTGTTTACCAGAAGCTCCCTGAAGATGTCGAGATTTGGAATGCCATGTCTTCTCTAACAAAGGCCATGTGCTGGAAAATGGTTAACAAGACTAAGGATAAGTTAAATCAAGTTGGTATGGCCATATATCAGAAGCCAATGGACAACAGTTGCTATGAGAAAAGACCAGAAAACAGCCCACCGTTATGCAAGGAAACTGATGATGCTGATGCTGCATGGAATGTACCTTTGCAAGCATGTATGCACAAATTGCCTGCTGGCCAATCAGTCCGAGGGTCAAAATGGCCAGAGACATGGCCACAAAGGCTTGAGAAGACCCCCTACTGGATAGATGACTCTCATGTTGGAGTCTATGGAAAACCAGGAAACGAAGATTTTGAGGCTGATTATGCTCATTGGAAACGAGTCGTAAGTAAATCTTATGTGAATGGCATGGGAATCGACTGGTCTAAAGTAAGAAACGTCATGGACATGAGAGCTGTATATGGAGGTTTCGCTGCAGCTTTGAGGGACCAAAAAGTCTGGGTTATGAATATTGTGCCAACGGATTCAGCAGACACGCTGCCCATTATTTATGAGCGTGGCTTGTTTGGTATGTACCATGACTGGTGTGAATCTTTCAGCACTTACCCGAGAACATACGACCTTCTGCATGCAGACCATCTCTTCTCAAAGCTAAAAAAGAGATGCAAATTGTTGCCGGTGTTTGCGGAGGTCGACAGAATATTGAGGCCAGAAGGAAAGCTGATTGTGAGGGATAATGCAGAGACAATAAACGAACTGCAAGGCATGGTAAAGTCGCTTCAGTGGGAGGTTCGCATGACCTACACCAAGGGTAACGAGGGTCTTCTATGTGTCCAAAAGTCCATGTGGCGGCCCAAGGAGATCGAGGCAAGCATGTGA</cdnaseq>

Protein Sequence

<aaseq>MDGRRSSPSSSLCTTTTVVVFVALCLVGAWMMTSSTIFPLEITSNKKAAVKEQPARVNYGASEEAAAASGNSAEGVDRFGDTDNNDNAVPEEPNNTVPSEEEKFSENTVEKPVESSEEKAPPKEKEESKDTFDDANGKTEHSSAKEDGDSESGSGQSDGSKNGDEEEKSEEKKDDEQSDGERKDDQEEKAEGSGSKDTTDQPQIEETVDESGEKGQGAKSNEVFPDGAQSELLKESNTENGSFKTQDAESKNEKESQAASNSSDDETTYNWKLCNNNAGTDYIPCLDNEKAIKKLRTTKHYEHRERHCPVEPPTCVVPLPEGYKRPVEWPTSRDKVWYSNVPHTKLAEYKGHQNWVKVSGDHLLFPGGGTQFKNGALHYIDTIQQALPDIAWGKRSRVILDVGCGVASFGGYMFERDVLTMSFAPKDEHEAQVQFALERGIPAISAVMGTKRLPYPSRVFDVIHCARCRVPWHIEGGMLLLELNRLLRPGGYFVWSATPVYQKLPEDVEIWNAMSSLTKAMCWKMVNKTKDKLNQVGMAIYQKPMDNSCYEKRPENSPPLCKETDDADAAWNVPLQACMHKLPAGQSVRGSKWPETWPQRLEKTPYWIDDSHVGVYGKPGNEDFEADYAHWKRVVSKSYVNGMGIDWSKVRNVMDMRAVYGGFAAALRDQKVWVMNIVPTDSADTLPIIYERGLFGMYHDWCESFSTYPRTYDLLHADHLFSKLKKRCKLLPVFAEVDRILRPEGKLIVRDNAETINELQGMVKSLQWEVRMTYTKGNEGLLCVQKSMWRPKEIEASM</aaseq>

Gene Sequence

<dnaseqindica>1..1005#1108..1257#1858..2128#2213..2323#2794..2968#3057..3329#3705..3899#4081..4297#ATGGACGGCAGGCGGTCGTCGCCGTCGTCGTCGCTCTGCACGACGACCACCGTCGTCGTGTTCGTGGCGCTCTGCCTGGTCGGCGCCTGGATGATGACGTCATCCACCATCTTCCCGCTGGAGATAACCTCGAATAAGAAGGCGGCGGTGAAGGAGCAGCCGGCGAGAGTTAACTACGGCGCGTCCGAGGAGGCAGCGGCGGCATCCGGCAACAGTGCTGAAGGTGTGGACAGGTTTGGGGACACGGACAACAACGATAATGCGGTTCCGGAGGAGCCGAATAACACGGTCCCTTCTGAAGAAGAGAAGTTCAGTGAGAACACAGTGGAGAAGCCAGTGGAGAGCAGTGAAGAGAAGGCGCCACCGAAAGAAAAGGAGGAGAGTAAGGATACATTTGATGATGCAAATGGGAAAACAGAACACTCGAGCGCCAAGGAGGATGGGGATTCTGAATCAGGATCTGGGCAGTCGGATGGTTCAAAGAATGGCGACGAGGAGGAGAAGAGTGAGGAGAAGAAAGATGATGAGCAATCTGATGGTGAGAGGAAAGATGATCAAGAAGAGAAGGCTGAAGGCAGTGGCTCAAAGGACACGACTGACCAGCCACAAATTGAGGAGACAGTGGATGAAAGTGGGGAGAAGGGTCAGGGTGCAAAGTCCAATGAGGTATTCCCTGATGGGGCTCAATCAGAGCTTCTAAAGGAGTCAAACACCGAGAACGGGTCATTTAAAACACAGGATGCAGAGTCAAAGAATGAGAAGGAATCTCAAGCAGCATCAAATTCTTCAGATGATGAAACCACATATAACTGGAAGTTATGCAATAACAATGCTGGAACAGATTACATACCTTGCCTCGACAATGAGAAGGCTATCAAGAAGCTTCGAACCACCAAACATTATGAGCACCGTGAGAGGCATTGCCCTGTGGAGCCTCCTACCTGTGTTGTTCCACTTCCTGAAGGATATAAACGCCCAGTTGAGTGGCCCACGAGCAGGGACAAGGTAATTTTGTATTTTTATGATGTTTTTGCAATGTTGAATACTTTTGAATATGTCAAGGCTTATTTTTCTTCTCAGGTACTAAATTGACACGTTTCCTTGTAGGTGTGGTACAGCAATGTCCCCCACACTAAGCTTGCTGAGTACAAGGGGCACCAAAACTGGGTTAAAGTTTCTGGGGATCATCTCCTATTTCCCGGGGGTGGCACTCAGTTCAAGAATGGTGCACTTCACTACATTGATACTATTCAGCAGGTTTATGATCATTATCCGAGTAGCCCTTATTACATTCATACTTTCATGCATCACTCATTGGTTTTGCACAAGCTGTAGGAAAATCTAAATGTATTGTACTTGTTAACATCTGACTCCCTTAATAACATTCTATAAAGTTGGATTGGACTTAGGGAATATCACACAGCTACTAGTTTTGTTCTTTTGTAAGCGTTTTCCTTGCATTGGTACATAAATAAAAAATGCACTCTCTCTGGACATAACTACTTGGGCTTTTGGACTCAAGCACTCAAGCTTTCGAAACTTTGACTAAATTTGTTTAAAATACCTAATCCGAAAACATAAAAATCGTATGTATAGATTTGTCTTGAAATGCAGTTCCAATAATCTCATAAACTTATTAGATTTTATTAAGTTTTCTAAAATAGAATTGTGGTCGAAGTTGCATCTCGAAGATTGTGGAAAAAATGTTGGATGTTTAGTTATTTTTGTCCAGAGTGAGTAGTATTGTACCATCATGATGAAATTTCCATGCTGTGTTTGTGAAGAACAGAAGCAGATATTTACACTATACACACGTTCTCATTCATTTCCACACTAGGCTCATACTGCTTTCTGCAGGCATTACCTGATATTGCATGGGGCAAACGAAGCCGTGTCATTCTAGATGTTGGCTGTGGAGTTGCTAGCTTTGGAGGGTATATGTTTGAGAGAGATGTACTCACGATGTCATTTGCCCCAAAAGACGAGCATGAAGCTCAAGTACAGTTTGCACTTGAGAGAGGTATTCCAGCAATATCAGCTGTCATGGGCACCAAAAGGCTCCCATACCCCAGCAGGGTCTTTGATGTCATTCATTGCGCTCGCTGCAGGGTCCCTTGGCACATTGAAGGTCTGTCTTGTTGGTGGCATTATTTTATTTTATATTTCCCTTAAAAAAACTGATATAAATCGTGATGGTTACATTTTCTGTCAGGTGGCATGCTATTGCTGGAACTGAACCGCCTATTACGCCCTGGTGGTTACTTCGTCTGGTCTGCCACTCCTGTTTACCAGAAGCTCCCTGAAGATGTCGAGATTTGGAATGGTATTGTACTGTTCTTATTTAATCTTGCTCAAATTGAATGAAGTTGCAATGTGTTCACGTGTTTAAAAAAGCCCCCCCCCCCTCCTATTTTGTGGTAAATGCAAATCCATCAGTATAGCATCTAGTCGCATCTTGTGCAGCAAATGAAAAACAATGATCATACTGCCTTTGAGACCAGATTCAATATCCAAGATGAATGATTATGCCCTAGGTTGCTCCACAAATGAAAAAGGCCCAGCCTATACATTTTAACTAAAGTTCATGAGTTGTAAAGTTTTTGCTCCCCCTCCCCCCCCCCCCACGGCCCCACCCACCCACCCACCCACAAAAAAAAAAGAAGAAAACTATTCAGAAATAGAAACTCTTTGTAAGCATTAGAGGCATAGCTTGTCCTTTTTTTCTTGAAATACACGCTATGAGCTGATTTTCATGTAGACACCAGGCCTGACATAATTGTTCACTGTTTTCAGCCATGTCTTCTCTAACAAAGGCCATGTGCTGGAAAATGGTTAACAAGACTAAGGATAAGTTAAATCAAGTTGGTATGGCCATATATCAGAAGCCAATGGACAACAGTTGCTATGAGAAAAGACCAGAAAACAGCCCACCGTTATGCAAGGAAACTGATGATGCTGATGCTGCATGGTATGAATAGTTAATGTTCTTTCAGTGGACCGTATATTCATATCTGAAGTGTTTCTATGCTTTATTTTAAACAAACTTTTGAATGCAGGAATGTACCTTTGCAAGCATGTATGCACAAATTGCCTGCTGGCCAATCAGTCCGAGGGTCAAAATGGCCAGAGACATGGCCACAAAGGCTTGAGAAGACCCCCTACTGGATAGATGACTCTCATGTTGGAGTCTATGGAAAACCAGGAAACGAAGATTTTGAGGCTGATTATGCTCATTGGAAACGAGTCGTAAGTAAATCTTATGTGAATGGCATGGGAATCGACTGGTCTAAAGTAAGAAACGTCATGGACATGAGAGCTGTATATGGAGGGTAAGTAAATGGCTTGCTTTCTCAATCCCATTGGAACAAATAGTTTGAGTAGAATCGATATTCGTTACAATTTATTGATAAACCTAGCATATATGTTAATGCCCTTCCCAAGGCTTGGTCTACAACTTTGTGAAAAGAAGAGTTCACTGAGTGAAATCCACAAAATGTGCTAGTGTCATAGGAAAAAAGAATATATTTTACAACCTTATTTATTTCGATTCTTAGCCCCCCCACCCCCGTAATTGACAGTGCGGTTAATTTTCAAAAACCTCCCATTTCAGCATGTGTTGTTAAAGGCCAACGATAGCAAGACTCTGTTCTAGTACCTCATTTTATTTCCTCACTTACCTATTGTTTTACATTGTTGCATTGCAGTTTCGCTGCAGCTTTGAGGGACCAAAAAGTCTGGGTTATGAATATTGTGCCAACGGATTCAGCAGACACGCTGCCCATTATTTATGAGCGTGGCTTGTTTGGTATGTACCATGACTGGTGTGAATCTTTCAGCACTTACCCGAGAACATACGACCTTCTGCATGCAGACCATCTCTTCTCAAAGCTAAAAAAGAGGTCAGTTTTTTTTATTCTCTCCATGCTCACAGTTGTTTCATGCTAGTTAGTTGCTTAACCAAAATATAACGAATGAAGGACTTATGTCATGCTGGGTTAGCCTTTTCATGTAGTTTTAAGAGCATGTTTGTGCATAATTGAATCTTATTAATGCTTAAGCTATTATATTGTTTGTTTCCAGATGCAAATTGTTGCCGGTGTTTGCGGAGGTCGACAGAATATTGAGGCCAGAAGGAAAGCTGATTGTGAGGGATAATGCAGAGACAATAAACGAACTGCAAGGCATGGTAAAGTCGCTTCAGTGGGAGGTTCGCATGACCTACACCAAGGGTAACGAGGGTCTTCTATGTGTCCAAAAGTCCATGTGGCGGCCCAAGGAGATCGAGGCAAGCATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000375