BGIOSGA000402

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Revision as of 10:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000402| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000402, complete gene.| tag = P0648C0...")
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Gene Name

BGIOSGA000402

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000402, complete gene.

LocusTag

P0648C09.20

Ensembl Transcript ID

BGIOSGA000402-TA

Ensembl Protein ID

BGIOSGA000402-PA

Length

5917

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41585966..41591882

Sequence Coding Region

41591572..41591882,41589167..41589311,41587985..41588099,41587843..41587906,41587576..41587750
,41587254..41587492,41586790..41586842,41586562..41586639,41585966..41586186

Genome Context

<gbrowseImage1> name=IndicaChromosome01:41585966..41591882 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:41585966..41591882 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGAGGCGTCCTCGTCCTCGGCGGCGGCGGTCCCGCCGCTGGACCCGGAGGCGATTGCCGCCGTGGCGGAGGCAGCGCCACCGGAGGAGATGACGCTGGTGGCGAAGTGGAAAGGGAACGACTACACGGTGCGGGTGGTCGGGGACGACACGCTGGGGGAGCTGAAGCGGCGCATCTGCGAGGTCACGGGGGTTCTCCCTAAACGGCAGAAGCTGCTCTACCCCAAGTTCAAGCTCAACGAGTGCAAGGACTCCGAGCTCATCTCCTCCATCCCCTTCAAGCCCAACGTCAAGATCAACATGATCGGCACTGTTGAAGATGAAATATTTGTGGACCAAGAAGATGATCCAGAGATACTCAATGATTATGAAATAGGCCAGAATGAAGTTACTGCTATCAAGGATAAAGATGTCTACAAGCAAAAACTAAAACGGCGTGCAAGTCAATATAAGATCAAGATATTGAATCCATGCCGCAAAGGGAAAAAACTGCTTGTCTTAGACATTGATTATACTCTATTCGACCATAGGTCCGCTGCTGAGAACCCTATCGAATTGATGCGTCCATATCTACACGAGTTCCTCTCTGCTGCATATTCAGAATATGATATCATGATATGGTCAGCAACTAGCATGAAATGGGTGGGGATGAAGATGGACCAACTTGGAGTTCTTGGCAACCCCAACTACAAAATTACTGCTCTTATGGATCACTTGGCGATGATAACTGTGCAATCTGAAAACCTGTCAGAAAAGAAAACTTTTGATTGCAAGCCTCTTGGTGTCATTTGGGCTCAGTTCCCCGAGTACAATGAAACAAACACAATCATGTTTGATGACCTCAGAAGGAACTTTGTCATGAATCCACAGAATGGTCTTGTGATCAAACCATACAAGAGGACCCATTCAAACAGAGGCACTGATCAAGAGCTGGTGAAGCTTACACAATACCTGCTTACCATTGCAGAGCTAGAAGATTTGAGCAAGCTTGACCATAGTGCATGGGAATCCTTCACAGAAGAAAATGCCAAGAGACGCAGACACAGAGAGTTATATGGGACTGATAGAATCATAGAGCTTGTCCCTATGACTCCACATGGTAATCAGGACAGCCACATGGTCCCTGAGTTAGTGGCTGCATTTGTCTCCGATTCAGTAGTGACTCTGTCCCCGCGCGGCTATTGGTGGCAAACTGGGGATCTTGATCCTTGCCTGGTTGTTTGCCCCCTAGGCCCACGACCATTGAAGGCGGTGCCCCACGGGCAGGTGTGTGCTAGGATTCAGAGAATAGCGGTAAAGAGGACCACGGCCAAGCCTGAAACCAACCAATGCAACTGCACCTCTCGTCCTCTCCTGCTCCTAAGTGAGAGAGAGCTAAGCGAGGTCCCCCCTCAGTAG</cdnaseq>

Protein Sequence

<aaseq>MAEASSSSAAAVPPLDPEAIAAVAEAAPPEEMTLVAKWKGNDYTVRVVGDDTLGELKRRICEVTGVLPKRQKLLYPKFKLNECKDSELISSIPFKPNVKINMIGTVEDEIFVDQEDDPEILNDYEIGQNEVTAIKDKDVYKQKLKRRASQYKIKILNPCRKGKKLLVLDIDYTLFDHRSAAENPIELMRPYLHEFLSAAYSEYDIMIWSATSMKWVGMKMDQLGVLGNPNYKITALMDHLAMITVQSENLSEKKTFDCKPLGVIWAQFPEYNETNTIMFDDLRRNFVMNPQNGLVIKPYKRTHSNRGTDQELVKLTQYLLTIAELEDLSKLDHSAWESFTEENAKRRRHRELYGTDRIIELVPMTPHGNQDSHMVPELVAAFVSDSVVTLSPRGYWWQTGDLDPCLVVCPLGPRPLKAVPHGQVCARIQRIAVKRTTAKPETNQCNCTSRPLLLLSERELSEVPPQ</aaseq>

Gene Sequence

<dnaseqindica>1..311#2572..2716#3784..3898#3977..4040#4133..4307#4391..4629#5041..5093#5244..5321#5697..5917#ATGGCGGAGGCGTCCTCGTCCTCGGCGGCGGCGGTCCCGCCGCTGGACCCGGAGGCGATTGCCGCCGTGGCGGAGGCAGCGCCACCGGAGGAGATGACGCTGGTGGCGAAGTGGAAAGGGAACGACTACACGGTGCGGGTGGTCGGGGACGACACGCTGGGGGAGCTGAAGCGGCGCATCTGCGAGGTCACGGGGGTTCTCCCTAAACGGCAGAAGCTGCTCTACCCCAAGTTCAAGCTCAACGAGTGCAAGGACTCCGAGCTCATCTCCTCCATCCCCTTCAAGCCCAACGTCAAGATCAACATGATCGGGTAAGCGCAATACCCTCCTTCCTCCTCGAACCCTACACCTCCATGTGCCGTCCCGTGTCTACTCTCGCTCGTGTTCTGCAGATACCTGACTGCGAAAACATTTGGTTACTCGTCGTTGAACTGGATGATTAGCTCGTAATTCGGGGGAATGTTGGATTTCGGTTGGTGATTCGACCGATCTATTCGATCCAGTGGCATCGCGTTGTTCATGATTTGAAATTGTTGTTTATTTCCTATGGGTTCTCAGATGCTGGGAACGGTATTTGAAGTTTGGGATTGACATCCAGTAGCAGTATGTGGAGACGTTTGTCTATTAGATTAGTTTCACGAATGGACGTGGAGTAACGTGGAGTGACTGAGGTTATGTGGTGTCGTTTGTCTATTAGATTAGTTTCTCAAACCTTGATTCCTCACAGTTTGAACACATTCGGGAGTGCTGTAGTTGCAATGGAATCATCCGTGGAGCATGTGAATTTATTGTTAAATTGATGGATTAGTGTTACCAATGGCTGCAAAATGATTATGGATTAGTGGGTTTTTTAAATAGAAAAACAGCAGGATGTTGTTTTTCTTAAATCTCTAGAGGCCCGTTATCGTTTCTTTTCTGATGTGTTTCTGATAGTGATGCGAAATTGGATGGTGGTTGATGTTATATGTTCAGTTGGCATGTTTTTGGTGGTGATTGAAGAACCTGAATGATGATCCAGGGGCAAACTAGTTAGTCTGTTTGTACAGTACCATTTAAGCCTATGATCTGTGTTGATGTGTTCTAATCTGAAAGTGTGCTTTGTTGAACTTGAACTTTAAAGAAAGTCTGTTTCGAGTTTGGACAATACCATTTAGGCCGGGAGATCAGATCATTTACCGTTTAGATGGAAAATTGAGGATTTACCCTCCTATGCCAATGACATGTTTGGGTCATCTAAGGTCACTTACATGTGGGTCAGCAGGGTGAATCCTCAATTTCAATCAAAACGGAGGGTATATGGTCAAAATTTTCGTTTAGGGTATAGATCTGTGTCCTATTCTGAAAGTTTGCTTTGTTGAACTTGAAACCCTACCTATGGACATAATTCGATTAGCTTCCTTTTATTCTGTTTTATAATGTGAAGTTACTCATTATGCTTTGCCACTTATGTGAATGTTATTTCTTGGTAAAATTTGCAAACTAATTTATATGTCAGTATGTTCTTGACTGTTAAATGCTTATGTGCTATGTGGTTTGAGCCACTGATGTAATCCGATATTCTGCACATGGTTGGATCATGATTCGTTATTGCTAACTAAACTCATGCTTTGCAACAGATCTCAAGTAAATATACCAGAAGAGCTAAACATGAAAAGTTGTATATGTTTCTCAGAGAACATATATACTTCCAACCATAAATCAATGAGATAACCCTATTACAGCACATGTGCACAAATGAGCTATCCACAAAAATCCAATTAGTTCAAGAGGTTCCTTATTATCCGCATGAATCGCACCAACTCAAGGAATAGTATTGTGATGGCAGACTCACCACCACCACCACTAATATGTCCCTTTTATGTAGTAGAGATCTTAATTATACACAGTAAGGTTGTATAGCTGGCAAATTGTAAATTGGGTGTAGATTGATTATTATTGTTCATTCATGTGATAACCTTCTAATGGTGTAGAAGACTAGGAGGATCTTATGCTATTTATATTGGGACGGCTGTTACAAAGAACTTTCATTTGACACACCTTTTTGTTTCTAATATTTTGTCCACTCCATAGTACTTCCATTTGTAGGATCAGTAGTGGATGCTTGGATGGTGAGAAAAATGCATGTAATTGCGCTAATTATGAACACTTGTAATGTAGTATTCCTCTTTAGGGAAAAAAACATGCCTTATGGAGGGCTTGCTGAGGAAGTTTGTGAAGCATTTACCTTGAATATACTTTGGTGTGACACTTGTGGTTTTTCTAGTGAGGCACTGTGAGGTGAGAGCTTTGATACCTTTCCTGATTCAGATCTGTTTTTATCATTTCCAAGATGAACCATGGGAGATGGACCTCCTCTTAATATTGATTTAGCACTCTGGCTTTACTCAACAGTCAACAGCAGCATATTCAAGTTTTCAGGTTTTTTTTTTCAATGGTTCAAATCACTCTTTTGCTGCGTTACATCTCAAAGATAATGGTTCTGTTTGAAAATTTGAATTTGTACACCATGTACTTATGTCCCATTTGAAGGTGCTTTCTATTTACTTTGCATTAATTTTGTATATCTTTCAGCACTGTTGAAGATGAAATATTTGTGGACCAAGAAGATGATCCAGAGATACTCAATGATTATGAAATAGGCCAGAATGAAGTTACTGCTATCAAGGATAAAGATGTCTACAAGCAAAAACTAAAACGGCGTGCAAGTCAATATAAGGTATATTCCCGTGTCATTTTCGTTTCCTGTCATATGCTTCTTCCTTATCCATGCTTTTATGGTTCCACAATATCCTGTTTGTTCTGACAGCCTGAGCCACATCTTAGTGCTTGTTCCTTTGACCTACATGAAATTGGTAATATTTCCTAGCGTGGTTCAGGTTGTTAGTATGTCAGCATGTCGATTCTAGAAATATTTTGTGGTTTCACTTGCTCATAGACCAAAGCCATAACAGTGACGAGGGTTATTCTCTCTCTTGTGTGGTGCTGATTGAAGCCATAGCCAGAAACTTCTTTTCTTAGCAATGATCCATAAGTCTAAGCCCCTAGGGGAGGTAGTTTTTGTGGATAGAGATTTTGGACATTTGTGGGCGCTATAGCGATTTTCAGGTTACTGCAATGTGCTACTATGTTCCACAAGTTATCGTCAATTCCTCATCTAGCTATGTAGATGTACTAGTTTTACTTCTAATTGTTGTTTTGCATGCTTGGGATTTGTAGTAGATGTCTTATTGTGCTGAAAGGTATCATATAGGCACTTGGAGTAGAATAGTAAGTAGTTTTTGAAATTCCGCTATAGGCTGGCATCTGCTCTATTACCCACTATCTGTTGTCACCTTGTCTATTTGCTACTCCCTCCGTTTCATATTATAAGTTGTTTGATTTTTTTCCTAGTCAAACTTTATCAAGTTTGAACAAGTTTATAGAAAAATTCAGCAACATTTAAAATATCAAATTAGTTTCATTAAATCTAGGATTGAATATATTTAGATAATATGTTTGTTTTGTGTTGAAAATACTATTATATTTTTCTATAAACTTGGTCAAACTTAAAGAAGTTTGATTAGAAAAAAAGTTAAACGACTTATAATATGAAATGGAGGGAGTATTTTTTATCTGACTCTGGCGTGTGTCTTCTACTTAATGTAATAATCTACTACTCATACAAGTATAGTGCTTTTTGATGCTGTTGGTTGTGAAAGCAGGTCACTGATCTAATTGCTATCTTGTTAAATGTACATAGACGTCGAATTTATTATTTATCTTTTCTTCTTCCTATTTCTGTAGATCAAGATATTGAATCCATGCCGCAAAGGGAAAAAACTGCTTGTCTTAGACATTGATTATACTCTATTCGACCATAGGTCCGCTGCTGAGAACCCTATCGAATTGATGCGTCCATGTAAGGGCATCTCCCATCACCACTATTATGTTTTCCAATGAGCTGTCATGAGGATTGATGCCATATTCCTCTTCACAGATCTACACGAGTTCCTCTCTGCTGCATATTCAGAATATGATATCATGATATGGTCAGCAACTAGGTAAGCGTTTTGTGATCCTGATCTATCAGTTAACTGGTTATGGTTGTGCTGTGAAACAAGTAAAGAAAAATACGATTGGCCTTTGAATGCAGCATGAAATGGGTGGGGATGAAGATGGACCAACTTGGAGTTCTTGGCAACCCCAACTACAAAATTACTGCTCTTATGGATCACTTGGCGATGATAACTGTGCAATCTGAAAACCTGTCAGAAAAGAAAACTTTTGATTGCAAGCCTCTTGGTGTCATTTGGGCTCAGTTCCCCGAGGTTAGTAGTGGCGTGGTACTGTGAATTTGTGACTGATTCTCATTGAATTATTTGCTCATTGCTTCTGTTTCTTTCATATGCAGTACAATGAAACAAACACAATCATGTTTGATGACCTCAGAAGGAACTTTGTCATGAATCCACAGAATGGTCTTGTGATCAAACCATACAAGAGGACCCATTCAAACAGAGGCACTGATCAAGAGCTGGTGAAGCTTACACAATACCTGCTTACCATTGCAGAGCTAGAAGATTTGAGCAAGCTTGACCATAGTGCATGGGAATCCTTCACAGAAGAAAATGCCAAGAGACGCAGACACAGGTAGTTTTTGCTCAGTGTATTGATCAGCAGGAAAGAAAAGTTCGCCCTCCTTTCATTCCTTCACTGGCTAGTCAACGTGGCATTAGAACTAGAATCATTCGTTGGATGTGAGCCAGTGACAACCAACAAATCGCTTACTTCAGGAATACTTCTGACATAATACTGCCCGTGCGCTTCGACTCGTGCACCACAAAACTATGTTCGCAAAGCTGCATACCAGTTTATGTGTATTGGAACCGTTCTCTGTAGTGCATGTTCAAGCGCTTAAACCTTAGATAGTCTCTTGCACTGATGCGTCATTTGTTCACTTTAATATATCGCAATCTTGGTTTCTTGTCTAGTCTAATTCCTTGTCCATCACTGTGCTGGCATCGTAGCTCTGCATTGTGCATAGGGCTAGTGTTTCTGCAGAGAGTTATATGGGACTGATAGAATCATAGAGCTTGTCCCTATGACTCCACATGGTGGGACATTGACATGGGTTATGAGTTACACACTGCCTAGTATGGACGTGGTAATGATGAGCCAAGGCTAGCCTCTGGATAACTGGCTCTTCCAACGTATCATTTCAAGTACCATAATGGTGCTGCAGCCTGTTTGGTATCTCTATGTAGGTAATCAGGACAGCCACATGGTCCCTGAGTTAGTGGCTGCATTTGTCTCCGATTCAGTAGTGACTCTGTCCCCGCGCGGTACGAACTTGCACTAAAATACTTTCTTTGGCTTAGCGTGAGCTATGTACTAGAACTGATCTCTGTATTAGTACTCTTCCCTGTCTGCTTTAGAACCTCCGTTACCGTAAATTCCATCGAGCATAGAAGATTCGGGCGTGTGTATCTATCCATGTTGATCTATTATCTATTGGCCGTGCGCCTTATGGTAGAATCTGGAGATGTAAACCATTTCCATTTTCTTAAAAAAAATGATCTACTATCTATTGTATAACAATCTATGCATAAATTGTGAGTTACCAGTCCTTAAGTGAGAAGTGTGAGATGTAGTATGACTAGTATGAGCTACCATAAGCATTAGCTGCAATATTTTGAGGAGGTTGGTTTTGCCATCAGGCTATTGGTGGCAAACTGGGGATCTTGATCCTTGCCTGGTTGTTTGCCCCCTAGGCCCACGACCATTGAAGGCGGTGCCCCACGGGCAGGTGTGTGCTAGGATTCAGAGAATAGCGGTAAAGAGGACCACGGCCAAGCCTGAAACCAACCAATGCAACTGCACCTCTCGTCCTCTCCTGCTCCTAAGTGAGAGAGAGCTAAGCGAGGTCCCCCCTCAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000402

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA000402&oldid=38126"