BGIOSGA000406

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Revision as of 10:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000406| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000406, complete gene.| tag = P0491F1...")
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Gene Name

BGIOSGA000406

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000406, complete gene.

LocusTag

P0491F11.32

Ensembl Transcript ID

BGIOSGA000406-TA

Ensembl Protein ID

BGIOSGA000406-PA

Length

6724

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41500597..41507320

Sequence Coding Region

41506964..41507320,41505138..41505463,41504886..41504978,41504708..41504798,41504241..41504334
,41503363..41503460,41503122..41503191,41501871..41501971,41501516..41501632
,41501336..41501412,41501205..41501249,41500597..41501119

Genome Context

<gbrowseImage1> name=IndicaChromosome01:41500597..41507320 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:41500597..41507320 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGGGCCTTTGCTCGAAGGGATCGGCGGTGGACAAGTCGCCCAGCGACACCACGCTCGGTCCCGACCGGGTGGTCCGTGGCCATGAGCGTGGCGGCGCTGGCGTTGGCGTGGGGAAGGAGGAGAGGAAGACGGTTGCGAGGGAGGCTGCTGCCAAGAGGATCCAGGAGCAGCAGCAGCAGCAACGGCAGCAGCCTGCATCGGTCCAGGAAGCCCCGGCTTCTAGAGCGCCCATTGATGCCAGGGAGTTGCCATGGGATGGCGTGCCGAACTTGGCACGGTTGCCGTCGCAGAAATCCGGGATGGGTGTGGCGAAAGCCAGCGCTGCCAAGGCAAGTGGTCTGCTCGTGCTCTTCGTTTCAGAAGTAAGCTCAATTTTGGGGAGGGCTAGTACTGTTGGGCTTGGGAAAGCAGTGGAAGTGCTAGACACACTTGGTAGTAGCATGACAAATTTGAATATAAATAGTGGATTTGGATCAGGAACTACAACAAAGGGCAACAAAATATCTATTTTAGCATTTGAGGTTGCCAATACAATAGTCAAAGGTTGCAATTTGATGCGGGCTCTTTCAAAAGAGAGCATAAAGCATTTAAAAGAAGTAGTTCTTCATTCAGAAGGTGTTCAGAATCTTATATCGAAAGATATGGATGAATTACTAAAGATATCTGCTGCTGACAAAAGGGAAGAGTTGAAAGTGTTTTCTACAGAAGTTGTTCGCTTTGGAAACCGCTGCAAGGATCCTCAGTGGCATAACTTGGATCGCTACTTTGACAAGTTTGCATCAGAACGGACACCTCAGCATCACTTGAAAGAAGAGGCAGAATCAGTGATGCAACAATTGGTGACTTGTGTTCAGTGCACAGCTGAACTATACCATGAAATGCATGCACTGGATAGATTTGAACAAGATTATCAGCGCAAACAGCAGGAAGAGGATGGTTCAAGTGTACACCAAAGAGGTGAAAACCTGAACATACTAAAGCAGGAAGTGAAAAGCCAACGCAAGCATGTTAAAAGCTTGCAGAAAAAGTCTCTCTGGTCGAAGAATTTGGAAGAGGTCATGGAAAAGCTCGTAGACATTGTGCATTTCTTACATTTGGAGATCCATAATGCCTTTGGGCGCTCAGACAATGAAGAATCACAAGAACCTACCAAACGACGTAATAGATTGGGTCTAGCAGGCCTTGCACTGCATTACGCCAATATCATCAGTCAGATCGATACTCTTGTTTCTCGATCTAGTTCTATTCCTCCAAACACAAGAGATGCATTATACCAAAGTTTGCCACCGACTGTAAAATCGTCCTTGCGTTCTAAGGTGAATTCATTTGTGGTCAATGAAGAGGTTACTGCTGCTCAAATCAAGGCTGAAATGGAGAAGACTTTGCGGTGGCTTGTCCCAATTGCAAATAACACCACCAAGGCTCACCATGGTTTTGGTTGGGTTGGAGAGTGGGCAAATACAGGGTCAGAAGTGAACTGCAAACCAACAGGACAAATGGACCTGACCCGAATTGAGACACTGTACCATGCTGACAAAGAAAAGACCGAAACACATATCCTCGAGCTTGTTGCATGGCTTCATCATCTTATTAGTCGATCTAAATCCGCTAATGGCGAGCGGTCTCCCATCAAATCTCCTGTTCGATCGCCTACACAAAGGGGCCATACAATCACATTATCTCCAAACAAAGCCAGCAGCAATTCATCACCTCTTCTTACCCAAGAAGATCAAGATATGCTAAGGGATGTCAAGTACAGGAAATTCATCCCTGGTATAAGCAAAAGCCAAGAGTTCGAGACTAAGTCCAGACATAGCAAGCAAAGCAGGTTGAGCAAAAGTAATAGTCACTCACCAAGCAGTGGCAACATGAAAGAGTTGCTATCAATCAGGAGGATGCTTCCTGTCATCGACTTTGAGATCGATAGGACAAAAGCTATGGACGTAATTGATAGAGTCGATAATCTAAAAAGTACAGTAAGGACTTAG</cdnaseq>

Protein Sequence

<aaseq>MGGLCSKGSAVDKSPSDTTLGPDRVVRGHERGGAGVGVGKEERKTVAREAAAKRIQEQQQQQRQQPASVQEAPASRAPIDARELPWDGVPNLARLPSQKSGMGVAKASAAKASGLLVLFVSEVSSILGRASTVGLGKAVEVLDTLGSSMTNLNINSGFGSGTTTKGNKISILAFEVANTIVKGCNLMRALSKESIKHLKEVVLHSEGVQNLISKDMDELLKISAADKREELKVFSTEVVRFGNRCKDPQWHNLDRYFDKFASERTPQHHLKEEAESVMQQLVTCVQCTAELYHEMHALDRFEQDYQRKQQEEDGSSVHQRGENLNILKQEVKSQRKHVKSLQKKSLWSKNLEEVMEKLVDIVHFLHLEIHNAFGRSDNEESQEPTKRRNRLGLAGLALHYANIISQIDTLVSRSSSIPPNTRDALYQSLPPTVKSSLRSKVNSFVVNEEVTAAQIKAEMEKTLRWLVPIANNTTKAHHGFGWVGEWANTGSEVNCKPTGQMDLTRIETLYHADKEKTETHILELVAWLHHLISRSKSANGERSPIKSPVRSPTQRGHTITLSPNKASSNSSPLLTQEDQDMLRDVKYRKFIPGISKSQEFETKSRHSKQSRLSKSNSHSPSSGNMKELLSIRRMLPVIDFEIDRTKAMDVIDRVDNLKSTVRT</aaseq>

Gene Sequence

<dnaseqindica>1..357#1858..2183#2343..2435#2523..2613#2987..3080#3861..3958#4130..4199#5350..5450#5689..5805#5909..5985#6072..6116#6202..6724#ATGGGGGGCCTTTGCTCGAAGGGATCGGCGGTGGACAAGTCGCCCAGCGACACCACGCTCGGTCCCGACCGGGTGGTCCGTGGCCATGAGCGTGGCGGCGCTGGCGTTGGCGTGGGGAAGGAGGAGAGGAAGACGGTTGCGAGGGAGGCTGCTGCCAAGAGGATCCAGGAGCAGCAGCAGCAGCAACGGCAGCAGCCTGCATCGGTCCAGGAAGCCCCGGCTTCTAGAGCGCCCATTGATGCCAGGGAGTTGCCATGGGATGGCGTGCCGAACTTGGCACGGTTGCCGTCGCAGAAATCCGGGATGGGTGTGGCGAAAGCCAGCGCTGCCAAGGCAAGTGGTCTGCTCGTGCTCTTCGTACTCCCTTCTTCCCGTTGAATTTGGGCGCAATGCGGCTTAAAATCATCATATGCCATTTCATTTGTTCGAAAAATGATATGCTGTTTTCAGTTCTGTTTATATATCAATGCATTGCCTTCTTGTTTGCTGCTGCCGAGCCAGCACGGTGCACTAAGAGTCTAAGACCTTACTAATGTTTAAGGATACCCTTGACTAGCATCCTTGTGGAGATCCTAAGTTTGCTGCTTCACTTTGAATGATTGACAACAAGGGATGTGGTTCCTATTGCTGAATGGCATATTAATACCCAGTACTCTTTATTTTAGTGAACTTAATATTTGTCAGTGAATGACTTTCCTTTATGAAGCATTTCTAATTGAGGGAATGCTTTACATCCGTCGGTGAAATCTGATGCTGCATTGACCTTTGAGCCTTTAATTAGACGAACTTGACAGGTGGGTGCAATCTAGTACATAAATTTGCGAAACACTCATTTTGGCGCACAAACTTGTATGTGTGTGAGGACCAAGGCCAAATGCCACATTGTGGCTAATTTTGCTAAGTTGGACGCTGATTCGGATGTCACACACTTGTGAGAAGGACGTGCAACAATATTCGCAAAATAACCTCTTATTTGGTTTCTATTTTATTCGTCCCTTTGTTTATATCCCCTACACCCTTCCTCTTTTTTTAATATGTCTTTCATTTTACAAGTAGCATGCTTATTTTATATTTGAGAGCACATGCATGTCTACATGGCGTTTTTTCTCAAGTGCGTGCCTATGAGGCATCCTAATCAGCATTCAACTTAGTAAGAATAGCCATAGTGAATCGTTTTGGCCTTGGTTCGCATACACTAGACAAGTTCATGCACCAGAATCGCTTTGTAAGTTCACGTACTAGATTGCATCCACCTTGCAAGTTCATAAACCTCCAACACAATTTTTAATGCTGCCTGTTTTGCGTTTTTCTTCTATCGATGATCATGCGCAAGCTTGGTGTGATTATTTACATTGTTTAGTCATTTTTACAGAGGAAAGTATTTTTTATTGATTGCTAGGGACTCTAGGTTAATCTAAATATGCACTTATTACTGTTTATAACTGCCCATGTGCTGCAAATGATTCAGTACTCCAATGGCTGTTAACTGATGCACCTAACCTACCACAAAAGGAAAACTAGAAGTTTGGAGATTCTTTATCTTGGGCATTACATCAATAACTAATATCCTCAACCGTTTGCTCTCATCACACATTCAATCACTCCATAAATTTTGATCTGAGCAACTCTAATCCATGATTAAATTTTGATATGAGCGGTTCTAATCCATGAGACAAATTGCTGGGCGACACCTAAAAGTGATGTAAAATCTTTAGTTCTGTATGATTTTGTATCGTTGCTAAAGGCTGAAGTGATTTCTTCAGCTCCACAGTGTTTATCGATGTTTGCAATATTTCAGAATGTTGTTTCTGTGAGAACATAGGTCATTTTTAATGTTTGCTTGCCATGTTGAAACAGGTTTCAGAAGTAAGCTCAATTTTGGGGAGGGCTAGTACTGTTGGGCTTGGGAAAGCAGTGGAAGTGCTAGACACACTTGGTAGTAGCATGACAAATTTGAATATAAATAGTGGATTTGGATCAGGAACTACAACAAAGGGCAACAAAATATCTATTTTAGCATTTGAGGTTGCCAATACAATAGTCAAAGGTTGCAATTTGATGCGGGCTCTTTCAAAAGAGAGCATAAAGCATTTAAAAGAAGTAGTTCTTCATTCAGAAGGTGTTCAGAATCTTATATCGAAAGATATGGATGAATTACTAAAGATATCTGCTGCTGACAAAAGGTTAGCATTGATCTCACTGCTTCTGCAAATTATAAACATGTGACTGCACATTCTATTCATTTGCTAGAAATATGTATACATGATGGTATATCAACAATATCGTATTGTGCTTAAAGATGTACTATTTTCTTCTATTGAAGTTTTGGTTATTTCTGACAGGGAAGAGTTGAAAGTGTTTTCTACAGAAGTTGTTCGCTTTGGAAACCGCTGCAAGGATCCTCAGTGGCATAACTTGGATCGCTACTTTGACAAGTTTGATTCGTTTTTCACCCCTATGTTTTATAAAGCAATGATATAGGGAGTATTAAGTTAGTGCTTTGCTGCATCAAAATATTTCAGGTTTGCATCAGAACGGACACCTCAGCATCACTTGAAAGAAGAGGCAGAATCAGTGATGCAACAATTGGTGACTTGTGTTCAGTGCACAGCTGTAAGTAATGATTATCTGTCTTGTCAACATTGCCTTGTAATGCTGTTTATCCACTAGGTCTGTAATTTTTATTTACCATACTATAGCGAGACAAAGGCTGAATCTTTTCTTATTCTAACAAGAGGACTGGAGAGTTATTTTTTTGATCATGGACTAGAGAGTTATTGAGACTCTTCCTGCTGCATTTCCTAATCAATTTTTTCTTATGTCTCAATGTTTTGCGCAGTGAAGTATATATGACACTGATATTCACCCGCTAGTCACTATGAATTATATACTGTTAACTGCATCTTACTATCAATCTGCTGGCATTTATCAGTTTTCTTCTTTTGCATGTCTTGTTGAAATTACAAATTTCAATTTTTTTTTTCAGGAACTATACCATGAAATGCATGCACTGGATAGATTTGAACAAGATTATCAGCGCAAACAGCAGGAAGAGGATGGTTCAAGTGTACACCAAAGAGGTTAGTGTGTTTGCATGATAATATATAAGAATGACCTGTAAGAGCCGTATGTGAAACTCCTCGTTTGGCCGAAAAACAGTTTTCTTCAAAGGTGGATGCTGCTTCTGGTTCTTTTTCAGGTCATCTGAAACACTAGATTGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCCCTATGGATCGGTCCTTAACCCGTGCTTTGAGGCCTCTGCCTCCTACACGAGGGCCTGCCCTCCATAGGTCGATTCTTAACACATGTTTTTACGAGGGGCCAACGAGTGACTTTTTTTAACTAGGCCTGAAATTCGCTCCCGTGGGGAGTCAAACCCAGGACCTAGAGCTGCTACTTGAGCCTTGTAACCACTAGGCTACATGCCCTTTCGCTTAGCTTAGACAGTTCAATGCATGATAGCAAGTCTAGTTTTCTTTCTTATGTTATTCATCTACGTTGTACTTTTGACAGTCCACTGCTTCTAAAACTATGACAGTCCACTGCAGCTGTTCACCAATGGAGAATATGAACTGTGAATAGGAAGAACCCCTAGACTATGAGCCTATGAAGTTCCAACTTCCATTTCACTTATCTTTGTGTTTCAAAATGAAGCACAAATCTACTTCTCCTCCTCCTTACCGCTGCTATCTTAACTTTTAGTATTGACTAGATTTTGAAAGCACTTGATTCACAAGTAGAGCATTTTTCACTATTTTGTTTACTTCATCTGATTAGATGCTTAATGTTATATTTTCATTTACAGGTGAAAACCTGAACATACTAAAGCAGGAAGTGAAAAGCCAACGCAAGCATGTTAAAAGCTTGCAGAAAAAGTCTCTCTGGTCGAAGAATTTGGAAGAGGTTGGTCATTGGTTTTATTATAGTTCTTGCTATGAGCAACATATAGCTATATGGAAGCATGCTCACATTGTCAATTGTGAAGTTCCACTCATTGATTGTCCAATTGAACTAGAATTCGTTTTGTGCAATCCTGTTCGTCTAATTTGAAAAAAAAACATTTATTTTTCCTAGGTCATGGAAAAGCTCGTAGACATTGTGCATTTCTTACATTTGGAGATCCATAATGCCTTTGGGCGCTCAGGTATTAGGCTTCATGACTGCTATTTACTATTAAAATTATCATCATATCTATTGTTTCTATGCCTCCCTTAGCAATATGATCTGCTAACAGTTTTCCATGAAATTGTTTCCTTTTACACAAATTGAGCTGATGGTCTGTTTCCATTTCCTTATTTATTTAAGTCTTGAGATTAAGTGTGAGCTACCTAATTCAATAATACATCCTTTAATATTACGATAAGTATCAGGTCCTTCATATCGTACTCCCAAGTGTCACCTCATTTAGTCATGTCTGGGTTTTCAGTAACTGTCATCGGAATTTGCTAGGCGCCTAGGCTGTATTGTATTATTTGATCAGCTATTTACTTCACGCAGCTGTTTTCAACAATGCAATGCCTTGGTTGTCATCACTTTTGCTATATTCCTCTCTCATATAACCCAGTCCAGAACCATAAATGCCTACCTGATTCCTCGTATATTTGTCAGAGAAAGAAAGCACAGATCTTACCCTGCTGAAACATTGTTGATCATCAATATTACATGGGCCATAAATCAATGTGAACAAAACCCATATGTTAGTCTACCATTTTTTACTTGATAGAAGCTGGTGATTGAAATTGCTTATTAATCGCTATGTGCTGATGTGTTGCGACCAGAGCTTGTATTTTTTATCAGGACACATTGTGTGACTTTCCTGAGTATATGTGAGTTTTTGATAATACATATAAGTTGGGTGGGTGAGAAATCAGGAAACAAAGTGAGGATAAAGGCCTCACACGCTGCGGTGGGATGTAAAAGTAGAACCAAGTCACCAACCATCACCACCACAATCTTAAATATTTTAAGAGTAATAATGTCTCATTGTGAGCCAACTAATTTATGCACATGAATACACAATGGGTTAGCAGTTTATATACATGCTATGTGACATCATTGATACACTGAAGTGTGAGTGACATGGTATATCTTGATTGGAAATCCAACTTCTCTTTTAGCTACAGTTGTGTTGTCTGCCAACGGGGCTGACAATTGACAATTTAGTATATATGTGTGACGTTGTTTAATCTCTTTTCTATAATTAAGTAATGAAAATATAATAAAATGGAAGATCTACATATTATTGTACCGTGTTGAATAAATTCATCATTAACTATTTTTTTCTCAATTTATAGACAATGAAGAATCACAAGAACCTACCAAACGACGTAATAGATTGGGTCTAGCAGGCCTTGCACTGCATTACGCCAATATCATCAGTCAGATCGATACTCTTGTAAGCTCAGTCTCAACTGGACATCCTGTTAGTTTCTTTTTGTCTGTGGAGAAACGCATTGGTCGTTTTTTTATCAGCTAACAGCCCTCGTGCATTGTATTCATGTCACTTCTGTGAAAGTATCAGGACTTAAGACCTGAATTGATGTCGCACGCATGTGCAGTGTTGATCTAGCTGCTTACGAACAATCCAACTTGATAGTCTTTTCTGGTAGTCTGATAAGGGCGTTAATTGGCAGGTTTCTCGATCTAGTTCTATTCCTCCAAACACAAGAGATGCATTATACCAAAGTTTGCCACCGACTGTAAAATCGTCCTTGCGTTCTAAGGTGAATTCATTTGTGGTCAATGAAGAGGTATGCAAAATAGCACACAACATATGCTCTATTAAGGTCAACATCATGCTATGACTATTACATATAACTGAAATTGATTTAATCTTGTACTAAATCGATGCAGGTTACTGCTGCTCAAATCAAGGCTGAAATGGAGAAGACTTTGCGGTGGCTTGTCCCAATTGCAAATAACACCACCAAGTATTATAAGCTATCTTAATAGAACTCAATCATATATATGAGCTTTGTTTTGTGTGTTCCTGAATCTGATAATTTAAATAATACAGGGCTCACCATGGTTTTGGTTGGGTTGGAGAGTGGGCAAATACAGGGTTGGTATCCAACTTCATCCAGTTGCAACATATAAAGTGGCTAAAACTAAGAGTTTTGATGCATGATGTTTATTATCTGATGCAGGTCAGAAGTGAACTGCAAACCAACAGGACAAATGGACCTGACCCGAATTGAGACACTGTACCATGCTGACAAAGAAAAGACCGAAACACATATCCTCGAGCTTGTTGCATGGCTTCATCATCTTATTAGTCGATCTAAATCCGCTAATGGCGAGCGGTCTCCCATCAAATCTCCTGTTCGATCGCCTACACAAAGGGGCCATACAATCACATTATCTCCAAACAAAGCCAGCAGCAATTCATCACCTCTTCTTACCCAAGAAGATCAAGATATGCTAAGGGATGTCAAGTACAGGAAATTCATCCCTGGTATAAGCAAAAGCCAAGAGTTCGAGACTAAGTCCAGACATAGCAAGCAAAGCAGGTTGAGCAAAAGTAATAGTCACTCACCAAGCAGTGGCAACATGAAAGAGTTGCTATCAATCAGGAGGATGCTTCCTGTCATCGACTTTGAGATCGATAGGACAAAAGCTATGGACGTAATTGATAGAGTCGATAATCTAAAAAGTACAGTAAGGACTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000406

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA000406&oldid=38130"