BGIOSGA000430

From RiceWiki
Revision as of 10:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000430| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000430, complete gene.| tag = OsI_045...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000430

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000430, complete gene.

LocusTag

OsI_04566

Ensembl Transcript ID

BGIOSGA000430-TA

Ensembl Protein ID

BGIOSGA000430-PA

Length

2560

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41102586..41105145

Sequence Coding Region

41104528..41105145,41104361..41104432,41103577..41103606,41103381..41103419,41102586..41102666

Genome Context

<gbrowseImage1> name=IndicaChromosome01:41102586..41105145 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:41102586..41105145 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGGCGTCGAGGGTGATGGCGTCGTCGTCGCCGTCGCACACGGCATCGGATATCGCGCGGTTCGCGGCGGTGAGGGGTGGGGGCGGGAGCGCGGGGCTGGGGTCGATGAACGTGGAGGAGATCCTCCGCGGCATCTACGCCGACATGCCGACGCCGGCGCTGCCCCTCGTCGGCGGTGACAGGCCGATGTCGCCGCTCCCGGCGCCGGATGTCGCCGCCGCGCCGCGGACGGCGGAGGAGGTCTGGAAGGAGATAACTGGTGCGGGCGTCGCCGCCGCCGCCGGCGGCGTGGTGCCCCCTGCTGCTGCTGCTGCTGCTGCCCCGGCCGTCGTCGCTGGCGCTGGCGCTGGCACCGGCGCGGAGATGACGCTGGAGGACTTTCTGGCGAGGGAGGGCGCGGTGAAGGAAGACGAGGCTGTGGTCACCGATCCCTCGGCGGCCAAGGGGCAGGTGGTGATGGGGTTCCTGAACGGGGCAGAGGTCACCGGAGACGTCACCGGCGGCAGGAGCAGGAAGAGGCACCTGATGGATCCGATGGACCGCGCCGCGATGCAGCGGCAGAAGCGAATGATCAAAAATCGCGAGTCGGCGGCGAGGTCACGGGAGAGGAAGCAGGCCTATATTGCTGAGCTCGAGTCGCTGGTCACGCAACTCGAGGAGGAGAACGCCAAGATGTTCAAAGAACAGGAGGAGCAACATCAGAAACGACTTAAAGAGCCTTCATATAGGAACATGCAGTACAGAACACAATACTGGCTCAAGGAAATGGTTGTTCCAGTCATCATTAGGAAAACGTCAGCACGAGATCTTAGAAGAACAAACTCGATGGAGTGGTAG</cdnaseq>

Protein Sequence

<aaseq>MMASRVMASSSPSHTASDIARFAAVRGGGGSAGLGSMNVEEILRGIYADMPTPALPLVGGDRPMSPLPAPDVAAAPRTAEEVWKEITGAGVAAAAGGVVPPAAAAAAAPAVVAGAGAGTGAEMTLEDFLAREGAVKEDEAVVTDPSAAKGQVVMGFLNGAEVTGDVTGGRSRKRHLMDPMDRAAMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAKMFKEQEEQHQKRLKEPSYRNMQYRTQYWLKEMVVPVIIRKTSARDLRRTNSMEW</aaseq>

Gene Sequence

<dnaseqindica>1..618#714..785#1540..1569#1727..1765#2480..2560#ATGATGGCGTCGAGGGTGATGGCGTCGTCGTCGCCGTCGCACACGGCATCGGATATCGCGCGGTTCGCGGCGGTGAGGGGTGGGGGCGGGAGCGCGGGGCTGGGGTCGATGAACGTGGAGGAGATCCTCCGCGGCATCTACGCCGACATGCCGACGCCGGCGCTGCCCCTCGTCGGCGGTGACAGGCCGATGTCGCCGCTCCCGGCGCCGGATGTCGCCGCCGCGCCGCGGACGGCGGAGGAGGTCTGGAAGGAGATAACTGGTGCGGGCGTCGCCGCCGCCGCCGGCGGCGTGGTGCCCCCTGCTGCTGCTGCTGCTGCTGCCCCGGCCGTCGTCGCTGGCGCTGGCGCTGGCACCGGCGCGGAGATGACGCTGGAGGACTTTCTGGCGAGGGAGGGCGCGGTGAAGGAAGACGAGGCTGTGGTCACCGATCCCTCGGCGGCCAAGGGGCAGGTGGTGATGGGGTTCCTGAACGGGGCAGAGGTCACCGGAGACGTCACCGGCGGCAGGAGCAGGAAGAGGCACCTGATGGATCCGATGGACCGCGCCGCGATGCAGCGGCAGAAGCGAATGATCAAAAATCGCGAGTCGGCGGCGAGGTCACGGGAGAGGAAGCAGGTGGGTGTGGAAACTGTGCATTTTTACAAGCTTTCGTTCGCCCTAGGAATTTGAGTTATACTGAGAAGGCTGACGTCTTCTTTTTGTTGGTGAAGGCCTATATTGCTGAGCTCGAGTCGCTGGTCACGCAACTCGAGGAGGAGAACGCCAAGATGTTCAAAGAACAGGTACTTCTCCGAGACCCCGACATTTCTCGTGTGCTTGTTTGATGTTGGAAACTTGAATGTGGGGATTCATGTGTTGAGAATTGAACCGTGTCTCCATTGTTTATTGAGCTTAAACTTGCAGAAATGTTTCTGTTAAATCTCTAGGTGAGTAGGCATGTGACCATGAACATGTTAGAACTGCAACAGAGTTGGGCTGTGGAGCCAAAATGAATTGCAAGTAGTATTCGTTTTTGTTAGCCATCTGCTTAGGATGCCATTTGCCGTGGTAAATTTTTTAAAGGAAAATGCTTCGCATACAACAATCATATACTAGTGCACCAAGCAGCACACGCTGTTCGGCTGTTCGGTACAGCGGCCACGCTACAGCCAATTGCTACACCAAGCAGCACAGCCGCTGCACTAAGCTTGCTGCCGCACAGCGCTGCATCAAGCAGCCGAACACGGCATATGCATATTAAAACTCATCTCATTCGCTGCCTTTGATGTATTCTCGCTTTTCCTTCTTGGAAAAGGTCTCCCTATAAAATTTGTAGTGTGTACAGAAGTTGTCTGAAAGAAGTGTTATTCACTATACTCACCTTTTGTTCTTGTCTCCATTTCCCCTGTCCATTTTAATTTAGAATTTCATACTGTGCCTACACGGTTACGGCTGGATTGTGCATGACTTGCTTATAACTAATCAAGGATGGCATAAGTTACTCTTCTTGGTCTTCTAGCAATTTCCTTACGATAAACTCCCTCGCATGTGTTTCAGGAGGAGCAACATCAGAAACGACTTAAAGAGGTAAGCTTTGTAAGATGGTGTTGCCTTTAATTATCTAGTGCTTTAGAGCATTTGTGTTAAGTGCCATATCCCAAAAAAAACTTCACCCACAACGCATGCCCTGGAGGGGAAAAAAGAACATCGTCTTGTGAAAATCTTGTAATCAATCCTGGATCAGCCTTCATATAGGAACATGCAGTACAGAACACAATACTGGGTAAGTATACACTGGATTATTCCGTATTCGTTGGATATGATACTCCAAACAGGAGATGCTTTTTAGCCTTCCCACTAGCCTGCACCAAGTGGCTTGGCAAACAAACAATAGGTGATGCTGACACCTTTCGATGGCATCAGCACAAGTGCACAACACATGTTGAGTTTTGAGATTGTCTACCTCATCCATTTCTTTCTTGGGAGCCTGTTCAACTCATTATAGATGCATTGCATGTATATATGTCTGATTAAAAAGGCCTGAGCCTGCAGTTCCGTGCTTTTCCACCACGGCACAGCTTGCCAGGTTGAAGCAGTATATAGTTATAAATTGTCTTCTTTTGTCACTATCAGGGAGGTTGGGTTGAGAGGGAGATGCTTTGTCAATTTGGTTGTATAAGTTGCATCGTAGGCACAGTTGAGCCCACATCTTGCTTAGGAACAGTTCGCCTCCATTTGGCTTTGCATACTATAGTTGTCTTCCATTTAGTTTTCAGCCAGCATAGGATTTCAGATTTCTTCTAATTTTGCCTTTCCTGCCTGGATTGTATATATTGATTTATATATATCTTGACGACCTGCCTCTCATCGTTGGTGCAGAGGCCGAATTCCATTATCCAAAAAAAAATAAAATCTTTTGCAAATCTATATGCTCATTAACTCATTCATTAGGTTCATCGATCATGCTTATCTGAAGAAATCTGTTTACTTTATGCAGCTCAAGGAAATGGTTGTTCCAGTCATCATTAGGAAAACGTCAGCACGAGATCTTAGAAGAACAAACTCGATGGAGTGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000430