BGIOSGA000438

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Revision as of 10:05, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000438| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000438, complete gene.| tag = P0423B0...")
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Gene Name

BGIOSGA000438

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000438, complete gene.

LocusTag

P0423B08.43-1

Ensembl Transcript ID

BGIOSGA000438-TA

Ensembl Protein ID

BGIOSGA000438-PA

Length

3664

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40965939..40969602

Sequence Coding Region

40969402..40969602,40969230..40969322,40969059..40969134,40967728..40967837,40967317..40967408
,40966857..40967030,40966655..40966748,40965939..40966022

Genome Context

<gbrowseImage1> name=IndicaChromosome01:40965939..40969602 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:40965939..40969602 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGATCGCCTCGAGCTCCAGGGCAGGCACGGCAAGTCCCGCGTCCGCGTCTCCCGCGTCTGGCGCCGCCCCGCGGCCGCGGGAGGCCACGTCATCGTCGAGTGGAACGTGGCCGTCAGCGTCGTCTCCGACTGCCTCCCCTCCTACACCTCCGACGACAACTCCGCCATCGTCGCCACCGATTCCATCAAGAACACCGTGTATGTGAAGGCCAAGGAATGCACGGAGATTGTCTCCATGGAGGAATTCGCGGTGATTCTTGGAAGGCATTTCACCTCGCTGTACCCGCAGGTCTCAGAGGCAACGGTGACCATCGCCGAGCGTCCATGGGAGCGTGTGGTTGTCGATGGGAAGCCTCATTCCCACGGGTTCAAACTTGGTGTTGAGAAGCACGTCACAGAGGTCATTGTGAAGAAGTCTGGAAACTTGCTCATAAATTCTGGAATCCAAGGATACTCCCTGCTAAAGACAACTCAGTCCGGGTTCGAAAAATTTGTGAGGGATCGCTACACACTTCTTCCTGATACAAGAGAAAGGATTGTAGCAACAGAAGTAACTGCCTGGTGGAGGTATCCTTTTGAGCATGTTTCCCAGATTCCATCAAAGTCATTCTGCTTCACACAAAGGTATCAAGACGTAAAGAAAGTTCTTGCAGATACGTTCTTTGGTCCTCCTGATGTTGGAGTGTATAGTCCATCAGTGCAGAATACACTATACCTGATGGCTAAGGAAGTTCTCAACAGGTTCCCGGATATAGCATCTGTTCAGCTAAGGATGCCGAACCTCCACTTTATCCCTGTTAACTTAGGGAACAAAGAAAATCCAGGATTAGTGAAGTTTGCTGATGATGTGTACCTGCCGACCGATGAACCACACGGGACCATTGAAGCAACAGTGAGCCGCCCCAAGTCAAAGTTGTAA</cdnaseq>

Protein Sequence

<aaseq>MADRLELQGRHGKSRVRVSRVWRRPAAAGGHVIVEWNVAVSVVSDCLPSYTSDDNSAIVATDSIKNTVYVKAKECTEIVSMEEFAVILGRHFTSLYPQVSEATVTIAERPWERVVVDGKPHSHGFKLGVEKHVTEVIVKKSGNLLINSGIQGYSLLKTTQSGFEKFVRDRYTLLPDTRERIVATEVTAWWRYPFEHVSQIPSKSFCFTQRYQDVKKVLADTFFGPPDVGVYSPSVQNTLYLMAKEVLNRFPDIASVQLRMPNLHFIPVNLGNKENPGLVKFADDVYLPTDEPHGTIEATVSRPKSKL</aaseq>

Gene Sequence

<dnaseqindica>1..201#281..373#469..544#1766..1875#2195..2286#2573..2746#2855..2948#3581..3664#ATGGCCGATCGCCTCGAGCTCCAGGGCAGGCACGGCAAGTCCCGCGTCCGCGTCTCCCGCGTCTGGCGCCGCCCCGCGGCCGCGGGAGGCCACGTCATCGTCGAGTGGAACGTGGCCGTCAGCGTCGTCTCCGACTGCCTCCCCTCCTACACCTCCGACGACAACTCCGCCATCGTCGCCACCGATTCCATCAAGAACACCGTAAGCCCGCGATCCCTCGCGCTTCCTTGTCTGGTTCTAGAATCTGGATTGATTCGGTGTGGTTGTTTTGTTCGGTCAGGTGTATGTGAAGGCCAAGGAATGCACGGAGATTGTCTCCATGGAGGAATTCGCGGTGATTCTTGGAAGGCATTTCACCTCGCTGTACCCGCAGGTAGATAAAAATGGCGTGTGATTTGACTGATTGTATGTATTTGAGGCAAGTTGGGAGTTTTATTGATATATTTGGGTGCCTTCCTATTCGGGCAGGTCTCAGAGGCAACGGTGACCATCGCCGAGCGTCCATGGGAGCGTGTGGTTGTCGATGGGAAGCCTCATTCCCACGGTGAGAAGAGTTTTATCACTTGTGCTTTCTGTTTGCGTGATCATTCAGTAGCTTAAGGTAAAGAAGAGGTGTGTTTCAATGGTTAAGCATAAGGATTATTTAGTCTGCTCTCAAGTTAGAAAACTCCTTTTTATTGTCAGGAGGTCAAGGTGTCAAATTTCCCAGGTTTATTTAACAATAACATAGTATAATATCACAACAGTACCAAATTTCCATCACACTACTAAAATCAGAGCACAAAAGCTAGACCCTCAAACCTTCTCTTTTTTAAGTGGCTTTATATTACTAGAAGAAAGAGCACCGTACAAGTATAGTTGCAGCAAGAGCAGTTCTACGCAGATCAACGTGAGCGTGTAATACAGATGCATCCTTACATATTCTTGGAAATCCTCATAAAACCTGCCATAGAAGTTTCGAGCTATTCTTAGGCTCTGTTCGGGAGTAAGGGTTGGGAACCCTCACTCCCCGGCATACAAAACGAAGCAGCGTTTTAGTGCGTGATTAATTAAGTTTTAGCTATTTTTTTTTTAAAAAATGGATTAATATAATTTTTTTAAGCAACTTTCGTATAGAAACTTTTTGCAAAAAACGCATCGTTTTGCAGTTTGAAAAGCGTGCACGCGGAAGACGATGAGTAGGAGTTGAGAACTTGTACTACCGAACGGAGCTAAGAATCACCAGACCTACCTCCCAGTATTGGTTGGATCGTTGTGCAAATGGAATAAATTACAACAGTAGGGTCACCAGGCAATTTTTTCTCTTTTCTATATTGTGAAACCACAGCTACAAAAGCAACTGTTTAGTTACATTTATACATTAATTTGTACCTAAACGTTACAAATGTGTTTCGGATGAATAAATGAAAAATGATGGGAAGATGAGCCCTTGGCAACACCTTTTGAACATTACTTCACCATCCCTAAACACTGGTAACAAAAATATCTTGTTCTTAGGTAGCATGAGCAGTCGTAAGGATCATATAAGTCCCAGATGGTGGACATTTTCTTTATTTCTTTTACTGAAGAATATTGGGTAATAAACCGGATGTGTTTGTTCAGAAGCATCTAGAATACAAATATGTTCATTGTTAAGCTTTGGCTTTGGCCTTTATCTAGGCTTTGGTCAAATTTCCCATGATCATTGTTATGCTTGCAACTCTCAAGTTGGATTTTGCAATATATATTTTCCTTCATTAATGTGTTCCGTTTTATCTTATTTTAGGGTTCAAACTTGGTGTTGAGAAGCACGTCACAGAGGTCATTGTGAAGAAGTCTGGAAACTTGCTCATAAATTCTGGAATCCAAGGATACTCCCTGCTAAAGACAACTCAGGTATTTTTGCCGGATGCTAACCTTTCACACTGGGGTTGCTTGGGTTCACTTGTAAAGACAGTTTATGTATTGTACTTTTGAACTAGGAATAAACTTGTAACAAGTGCTACTATGCATGCTTGAAGGAATTAAATGCAAAAATGTGAGGTAAAGTGCTAGCTGAAGTGTCAGAAAAGCAAAATAATTTAACTAGTTAACTTCTGATGAAGTATAAACGAAGGAAATATAAATTTTAACAAAACCAGACTGCTTTTTGTCATACATATATGCTCAATTTGTACTAGTGCATGCTAACCTTTCACCACCTTGTTTCTCTCAGTCCGGGTTCGAAAAATTTGTGAGGGATCGCTACACACTTCTTCCTGATACAAGAGAAAGGATTGTAGCAACAGAAGTAACTGCCTGGTGGAGGTCTGCTACTCTTCTTATATACCTGAGAAATTCTGTCATCCACCACTATTCTACCATTTTATTATCTTCATTTAAAGCTATGGTCATTCAAGGCATGAGATAAGCGAGTTCAGTACTATAATAGTTAACTATTCTGGTCTGTTCAGTTCAACATCATCTATATTACCAGTATGCCTTGTAGATGAATAGTTTTTACATAGGCTATTGCATCAATTTTAGGGGAGATTAAGTTACTTGGTGCTCATCCAATTGTTTGTGTGCTTATTAGTTGTTTTTTTTTTGTCAGGTATCCTTTTGAGCATGTTTCCCAGATTCCATCAAAGTCATTCTGCTTCACACAAAGGTATCAAGACGTAAAGAAAGTTCTTGCAGATACGTTCTTTGGTCCTCCTGATGTTGGAGTGTATAGTCCATCAGTGCAGAATACACTATACCTGATGGCTAAGGAAGTTCTCAACAGGTCTGTAACTCTGGTTTGGTTGTTACTTGCAGTAACTTTTTCTTGGTCATATTTAGTCCTTCTGGCCTTCTTATATACATTCACTAAATATATGTGTGCATTTTTAAGGTTCCCGGATATAGCATCTGTTCAGCTAAGGATGCCGAACCTCCACTTTATCCCTGTTAACTTAGGGAACAAAGAAAATCCAGGATTAGTGAAGGTGAGAATTGTAGCACTGCATTTGTATTGTTCTGTTTTCCTGATCTTTTGGGTACTTTCTTCTCAGGGCTAATGGTGGGTTTCAATTCACATCTAGATTTAAACTGGCAATTCTAATCCAAACACACTTGAGGTCTTGGTTCTGTTTAATAGCTAAATTGAAGGGATCAGTTAAGAAATACGAACTTGAACTGATGCTTTATATCCGTAATTCATTATCGTTCTTTTCTCTTTCTCTCTCTCTTTTTTAATACAGATCAGATATATTTGATTCGGCTTTTTGGAGAAAACGAAACATACAAAAACAGAGTCGTTAATTCATTATTGTTCTTAATTATATAATGGATTTGGAGATAAAATTCCCCTATTTTAGAGTATTGGTTCATAGAAATCTTAGTTGCTCGACTTTTTTCTGGCTACTACAGTCATACTACGATGCTAGGTTTCATGATTGGAATGAATTTAAGTGTTGCCGTATTGTCAACCTGCAACGTTATAATCTAGAGAAAATACATGATGTTATAATCCACTATGTTCTTGTGCAATGTTAGCAAATCTCATGCTGGGGGATTGCAATTGAAGCTACTCCGGAACTCTCATATCTCGAAAACTGATTTTTATTTTCTTGAACAGTTTGCTGATGATGTGTACCTGCCGACCGATGAACCACACGGGACCATTGAAGCAACAGTGAGCCGCCCCAAGTCAAAGTTGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000438