BGIOSGA000462

From RiceWiki
Revision as of 10:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000462| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000462, complete gene.| tag = P0683F0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000462

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000462, complete gene.

LocusTag

P0683F02.7

Ensembl Transcript ID

BGIOSGA000462-TA

Ensembl Protein ID

BGIOSGA000462-PA

Length

1048

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40523226..40524273

Sequence Coding Region

40524109..40524273,40523959..40524026,40523226..40523679

Genome Context

<gbrowseImage1> name=IndicaChromosome01:40523226..40524273 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:40523226..40524273 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGGAACGCGCGGTGGGCGCGGGCGCGGGGGCTCCCGTCGGCGGCCGGGCACGAGGCCGGGCGGCGCACGCTGGAGGAGACGGTGCGTCTCTCCCGCGCCTGGGGCATCCGCGCGCTCACCGCCTTCGCCTTCTCCAACGAGAACTGGAGCCGCCCCAAGGTGGAGGTGGACTTCTTGATGAGGCTGTTCGAGCGGGTGATCCACGATAGCGTCGCCGAGTTTCTGAGGGAAGGAATTCGGCTACGTGTAATCGGTGACAGCTCAAGGCTACCGGTTTCTCTACAGAAGATTGCGAGAGAAGCCGAGGAGACCACGAGGAACAATTCACAGCTTGATCTGACACTGGCAATCAGCTACAGCGGGAGGAGGGACATCGTGCAGGCGTGCCGGAAGCTTGCCCAGAAGGTGCAGAGCAAGGCGCTCGCGGCGGAGGACATCGACGAGGCGCTGTTCGCCGACGAGCTCGAGACGAGCTGCGCGGCCGACGAGTTCCCGTACCCCGACCTTCTCATCAGGACCAGCGGCGAGCTGAGGCTGAGCAACTTCTTGCTGTGGCAGTCAGCGTACTCGGAGCTCTTCTTCACCAACACGCTGTGGCCTGATTTCGGGGAGGCTGATTACCTCGAAGCGCTTTGCTCCTTCCAGAGCAGAGACAGGCGATTTGGTGTAAGAAAATTGTAG</cdnaseq>

Protein Sequence

<aaseq>MDGNARWARARGLPSAAGHEAGRRTLEETVRLSRAWGIRALTAFAFSNENWSRPKVEVDFLMRLFERVIHDSVAEFLREGIRLRVIGDSSRLPVSLQKIAREAEETTRNNSQLDLTLAISYSGRRDIVQACRKLAQKVQSKALAAEDIDEALFADELETSCAADEFPYPDLLIRTSGELRLSNFLLWQSAYSELFFTNTLWPDFGEADYLEALCSFQSRDRRFGVRKL</aaseq>

Gene Sequence

<dnaseqindica>1..165#248..315#595..1048#ATGGACGGGAACGCGCGGTGGGCGCGGGCGCGGGGGCTCCCGTCGGCGGCCGGGCACGAGGCCGGGCGGCGCACGCTGGAGGAGACGGTGCGTCTCTCCCGCGCCTGGGGCATCCGCGCGCTCACCGCCTTCGCCTTCTCCAACGAGAACTGGAGCCGCCCCAAGGTACACACGCCTCGCCGCCGATTCCTTCGAAATCTCTGCCTTCGCCGAGCTTGACGCGTCCTCGCCATGTTGGAATTCGCAGGTGGAGGTGGACTTCTTGATGAGGCTGTTCGAGCGGGTGATCCACGATAGCGTCGCCGAGTTTCTGAGGTAAACATCCGTACTTGCAAATTAAATAATTAGTTAATGCCTCACGCGTTCACAACACTTGTCTTTGTGGAACTGGAAGTTCGCCAATAGATGCTCAAAGCCCACAGTGCTCCGGGCGTACCAGCAACTCAATTACCAGCTTGTAATAGGAATTTCTTGCAAGATTCATAGGAAAAAGATTCAATTTTCACAGGAGCCAGTATAATTTCCTGCCAAAGTCTAATGTGTACATGTCATGTGGTGATGTGGACAACAAAATGAGGATTTTTTTTTCCACAGGGAAGGAATTCGGCTACGTGTAATCGGTGACAGCTCAAGGCTACCGGTTTCTCTACAGAAGATTGCGAGAGAAGCCGAGGAGACCACGAGGAACAATTCACAGCTTGATCTGACACTGGCAATCAGCTACAGCGGGAGGAGGGACATCGTGCAGGCGTGCCGGAAGCTTGCCCAGAAGGTGCAGAGCAAGGCGCTCGCGGCGGAGGACATCGACGAGGCGCTGTTCGCCGACGAGCTCGAGACGAGCTGCGCGGCCGACGAGTTCCCGTACCCCGACCTTCTCATCAGGACCAGCGGCGAGCTGAGGCTGAGCAACTTCTTGCTGTGGCAGTCAGCGTACTCGGAGCTCTTCTTCACCAACACGCTGTGGCCTGATTTCGGGGAGGCTGATTACCTCGAAGCGCTTTGCTCCTTCCAGAGCAGAGACAGGCGATTTGGTGTAAGAAAATTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000462