Os11g0246900

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Revision as of 09:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0246900| Description = Ankyrin repeat containing protein| Version = NM_001074142.1 GI:115484932 GeneID:4350194| Length = 3418 bp| Definiti...")
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Gene Name

Os11g0246900

Description

Ankyrin repeat containing protein

Version

NM_001074142.1 GI:115484932 GeneID:4350194

Length

3418 bp

Definition

Oryza sativa Japonica Group Os11g0246900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:7934151..7937568

Sequence Coding Region

7934162..7934207,7934273..7934729,7934878..7935310,7936390..7937184

Expression

GEO Profiles:Os11g0246900

Genome Context

<gbrowseImage1> name=NC_008404:7934151..7937568 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:7934151..7937568 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tggaggagcagctggattcatcggagatggacatggacgagcccggcgccgccgcccaagaccgccaaggcttgcgccgccgccaagaagccgagatcggtgagctccgacttcggcgaggagctggacctggagcagctcggtgccaagcagcagcagcagcagcaggagaggaagctgtcgaggcaggaccgcgtcgagctgagccgctcgttccagcacgcggtgagctcccacgactgggatggcgcggaggcgctggtgcggagggccgacgcgcaggggctcaacgacgtgctctgcgtcgccgtcgacgccatctggttcctcagcgacaaggaggagctcgccgccgtcgtggccctgatccggaggatcgtgtcggagggcgccaacgacttcacccgcgccgcgctccggacgtcgttcctcgcgtcgtgcgtgtcggcgtgcagggggagaacgaccagcctcgccgacgctgtgagcttcatggggcaaaagttgaacgagcgccttcaagaatcccatggcgacgaggtattgaaggcagaagcaagcgcaaaggtgcacaagttcacagagtgggctctaaagtgtatcgggctgcattcgcgtgtgcgggagaacaagggcagaggaaaccatggcacgatcattgaggtccaacttcagctgtctgctttcaagacatttctggatcttgccgataatgatcttactgggaaggatttcacggaggcctttgacgcggcatgttttcctcttacactcttctcaaacacctttgaccaaggttgggcatcaggtatctcggcagctgcaatacaaggactcttagagttgttagtagagggtggtgccgataatgtgaaccagtgctttcttgaggctgctcgctatggaagcactgaactcgtgcgcatcttacttcagattgctcgaaggaatagcttggacatcgatgtggatctagcccttggctttgctgctcactatgggaaactggataccatggggtgcttagttgaggagggtaatgcggttgcctttcttggccctttaatgcgggcagctgaacggggatgccttcaagttgttgaatggttcgtcaaccttggttgtcgggatatggagctttgcttagcccttactgctgcaacctctagtagccaggttgcagttgcagcctatcttctccctctagtcccaaagcatgttcttgcacccctcagcgtcgaaattctcaaggctgctggtgagaggagcaccggttccctgcatggtgtggacttccttctccgctcaaacttcctcaatgacccagctgccacatatgctgtagcagacaacattgcaaaatctgccgatgaggcagtggatgcaaagcttagatctttcatgctcgagcattggtcagaggcagctttttctgagggattcgcgtctgcgcaagagcacttcgttaacttcatgaggataatggaaaagggtgagtcgccgatctgcctgagggacctcccacttgagctggtgattgccatggcctacctaccactgtacagggaatgcgtggagtcaggtgggcggctattgccgcagaagctgagagggcagcttgttgaggcggctggtagactcgagggccggcaactcgacagggctagccaaggcacagagctcctggccatcttggagcaccacctcccgtgtttcatgatccagacttga</cdnaseq>

Protein Sequence

<aaseq>WRSSWIHRRWTWTSPAPPPKTAKACAAAKKPRSVSSDFGEELDL EQLGAKQQQQQQERKLSRQDRVELSRSFQHAVSSHDWDGAEALVRRADAQGLNDVLCV AVDAIWFLSDKEELAAVVALIRRIVSEGANDFTRAALRTSFLASCVSACRGRTTSLAD AVSFMGQKLNERLQESHGDEVLKAEASAKVHKFTEWALKCIGLHSRVRENKGRGNHGT IIEVQLQLSAFKTFLDLADNDLTGKDFTEAFDAACFPLTLFSNTFDQGWASGISAAAI QGLLELLVEGGADNVNQCFLEAARYGSTELVRILLQIARRNSLDIDVDLALGFAAHYG KLDTMGCLVEEGNAVAFLGPLMRAAERGCLQVVEWFVNLGCRDMELCLALTAATSSSQ VAVAAYLLPLVPKHVLAPLSVEILKAAGERSTGSLHGVDFLLRSNFLNDPAATYAVAD NIAKSADEAVDAKLRSFMLEHWSEAAFSEGFASAQEHFVNFMRIMEKGESPICLRDLP LELVIAMAYLPLYRECVESGGRLLPQKLRGQLVEAAGRLEGRQLDRASQGTELLAILE HHLPCFMIQT</aaseq>

Gene Sequence

<dnaseqindica>12..57#123..579#728..1160#2240..3034#cgtgaagctgatggaggagcagctggattcatcggagatggacatggacgagcccggcggcgccgcggcggcggcggcggatgccaataatggcgccgggtccaaggactgccccttgccgccgccgccgcccaagaccgccaaggcttgcgccgccgccaagaagccgagatcggtgagctccgacttcggcgaggagctggacctggagcagctcggtgccaagcagcagcagcagcagcaggagaggaagctgtcgaggcaggaccgcgtcgagctgagccgctcgttccagcacgcggtgagctcccacgactgggatggcgcggaggcgctggtgcggagggccgacgcgcaggggctcaacgacgtgctctgcgtcgccgtcgacgccatctggttcctcagcgacaaggaggagctcgccgccgtcgtggccctgatccggaggatcgtgtcggagggcgccaacgacttcacccgcgccgcgctccggacgtcgttcctcgcgtcgtgcgtgtcggcgtgcagggggagaacgaccagcctcgccgacgctgtgagcttcatggggcaaaagtaagcctgtccaaaacatgaattgcatgttttgcgaccgcgaaacttcgaatcgaattcgggaattcgattcgcctttatgctttgtatttgaaactagcctgatacaattgtggtgattgtaatgatttgtttatgtatttatcaggttgaacgagcgccttcaagaatcccatggcgacgaggtattgaaggcagaagcaagcgcaaaggtgcacaagttcacagagtgggctctaaagtgtatcgggctgcattcgcgtgtgcgggagaacaagggcagaggaaaccatggcacgatcattgaggtccaacttcagctgtctgctttcaagacatttctggatcttgccgataatgatcttactgggaaggatttcacggaggcctttgacgcggcatgttttcctcttacactcttctcaaacacctttgaccaaggttgggcatcaggtatctcggcagctgcaatacaaggactcttagagttgttagtagagggtggtgccgataatgtgaaccagtgctttcttgaggctgctcgctatggaagcactgaactcgtgcgcatcttacttcaggtaataataaaaacaataattcacatgtgaatcttatttcagttaataataaatattagttgtactatttaggttaatgactcctactgagcaaacaatataaatgcagcacaactaagtggttcttaatagcctgcaccacacattggtccccatgataaccaggtcatgaatatatgaatatggaaactatgtagagctaccacctttgctattaattcagaactttgttccttttgactggaaattgatcttttttttttctctatggagctttactgctcatgtttgaattatacttggtgtaaccgtcttcaaccttcatgccttcgaacctaccttaacctattactatactttccaaatttctggagatccatataatctgttacatagagtagctgggggactgttttctgctgacttgcttcatccagattcattacgacataactatagtatacatgaaaaatctggtgaattgtataattctccccttagagaagctcataaattttggggtggtcattaatctcactggagatacatagagaatccccaatcaaagggaaaaaatggtgtgatcaatctattcgtgatggaagactttcctgaactgcgctgattgatcaggtcctaaaataggttaatatattggagttgttttgactttagacagctggtgcacagatgggtttcctttgtaattcatctctactttgggcagcaattggaccaattccattgtaggtgcactatgcatgtatttagtcatgcaaaaaaaaaaagaacaatgttttgccatgcaccttttcatggttagaccatcactcaaatatggcagttctcgaatttaattgagttagataacaattgattatttgatatatttacaaatgttttcctgtctgaaaaatgtacaggcattataggtcttgtgaaatagaagctactcaggctgtttgaggaatttttttcctttttatttcatactttctgatattttgtctgttggtgcaaatatatcatgaaacattagcagcgttctaacatatctgttgtttgtatcttttttttagattgctcgaaggaatagcttggacatcgatgtggatctagcccttggctttgctgctcactatgggaaactggataccatggggtgcttagttgaggagggtaatgcggttgcctttcttggccctttaatgcgggcagctgaacggggatgccttcaagttgttgaatggttcgtcaaccttggttgtcgggatatggagctttgcttagcccttactgctgcaacctctagtagccaggttgcagttgcagcctatcttctccctctagtcccaaagcatgttcttgcacccctcagcgtcgaaattctcaaggctgctggtgagaggagcaccggttccctgcatggtgtggacttccttctccgctcaaacttcctcaatgacccagctgccacatatgctgtagcagacaacattgcaaaatctgccgatgaggcagtggatgcaaagcttagatctttcatgctcgagcattggtcagaggcagctttttctgagggattcgcgtctgcgcaagagcacttcgttaacttcatgaggataatggaaaagggtgagtcgccgatctgcctgagggacctcccacttgagctggtgattgccatggcctacctaccactgtacagggaatgcgtggagtcaggtgggcggctattgccgcagaagctgagagggcagcttgttgaggcggctggtagactcgagggccggcaactcgacagggctagccaaggcacagagctcctggccatcttggagcaccacctcccgtgtttcatgatccagacttgaaaggtcagcttccacatgatctgcattggtcgctgcaagaagcaaagtaacaagggcaatgcaccatcttcagtgttttccagtgctgtcatgttcctgcttggggacaatcatctgaaacgatggcaccttgaggtctctgagagcatagtgactgaagaactctcctgctggcgctgttcggagagtatataattttggggagaaaatggtgtgtaccttcttgtcgagccaagtgttgagtagatcttattgggatcataatcttgatgaaaatgatataagcattgagcaaagtgttctccagttttttctgagtgctagccatgggcgtcatgtttttgttttggactaatgagtttttgaacatggactagtctcatc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0246900, RefSeq:Os11g0246900