BGIOSGA000483

From RiceWiki
Revision as of 10:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000483| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000483, complete gene.| tag = OsI_044...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000483

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000483, complete gene.

LocusTag

OsI_04447

Ensembl Transcript ID

BGIOSGA000483-TA

Ensembl Protein ID

BGIOSGA000483-PA

Length

2958

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40090013..40092970

Sequence Coding Region

40092545..40092970,40090690..40092201,40090013..40090477

Genome Context

<gbrowseImage1> name=IndicaChromosome01:40090013..40092970 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:40090013..40092970 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGCTGTATGGCGAGGGCGCGTTTCCATCGATCACCGATCTGGCGGCGCATGCGCAGGTATCGCGCGCGACCGCCTACCGCTACTTCCCGACCCAAAGCGCATTAATTACTGCGGTGGTGGCGGAAAGTCTGGGGCCTATTCTGGCGTGGCACCCGCAGGACGACGATGCCCTGAAGCGCATCCAGCAGTTGCTGACGTTGGCCTATCCTCAGATGGAGCGACACGAAGGGGCGCTGCGCGCCGCATTACAGCTCTCTTTGCAGCAGTGGGCGCACGCCACGCCGGGCGAAAAGTTCGTGCGCGGCAACCGCAAGCGGCTGCTGGCGCTGGCGGTAGAGCCGTTGCAGGGTAAACTGCCGCCAGATTCTTTACAGAGAGTGATTCATGCTTTCTCGCTGATTTACGGTTCTGAGGTGTTCCTGGCCTCCAGCTATATAGAGAACGGCAAAGCGGGCGATCCGGCTAGCTGGCGCAGCAGTGAGTTCAACGCGGAATGGGGGCTGGGGGCGATCCACGCCGACCAGGCCTACGCCGCCGGTTATACCGGAAAAGGCATCAAACTTGGCATTTTCGATCAGCCGGTCTACGCCAAGCACCCGGAGTTTGCCGGTGAGAATAAGGTGATCAATCTGGTTACCGAAGGCATCCGCGAATACACCGATCCCTATATTCCGGTGAAAAAAGGCGACACTTTCCGCTATGACGGTACGCCGAGCGTGGACTCCGATGGCACGCTCGGTTCGCACGGTACCCACGTGGGCGGCATCGCCGCCGGCAGCCGCGACGGCGGCGCCATGCATGGGGTGGCATTCAACGCGCAGATCATCAGCGCAGAAAACGGCGACCCCGGCCCGGAGGACGGCATTGTGCTCGGTAACGACGGCGCGGTTTACCAGGCCGGCTGGGAGGCGCTGGTGGCCAGCGGCGCGCGCATCATCAATAACAGTTGGGGCATCGGCATTACCGAAAAGTTTGATGAGGGGGGTTATGACCCGGCTTATCCGCATTTCACAGTAAACGATGCGCAAAAGCAGTTCGATCAGATCAAACAGATCCTCGGCACCAAGCCCGGCGGCGCCTATCAGGGCGCGATCGACGCGGCGCGCAGCGGCGTGGTCACCATCTTCGCCGCCGGTAACGACGGCAATCTGAATAACCCCGATGCCATGGCCGGCCTGGCCTATTTCGTGCCGGAGATTGCACCGAACTGGCTGTCGGTCGCCAGCTTGCAGGATCCCACCAATACCGGCGACTACAGCATCAGCACCTTCTCTTCCCGCTGCGGCTACACCGCCAGCTTCTGCGTTTCGGCGCCGGGCACCCGGGTATACAGCTCGGTGATTGAAGGCACCAGCGTGGAGAATCTGACGACCGGCTACGCCAAATACAGCGGCACCTCGATGGCGGCGCCGCACGTGGCCGGCAGCGTTGCTGTGCTGATGGAGCGTTTCCCGTATCTGAGCGGCGCACAGGTGGCGGAAGTGCTGAAAACCACCGCCACCGACATGGGCGCGCCGGGCATCGACGCGCTCTACGGCTGGGGGATGATCAACCTGGGCAAGGCTATCAACGGGCCAGGCATGTTGGTGACCGCCGAGGATATTCCGGCGGAGTTCCGTATTCCGGATCCGACGGGCGTGGCTTACGGCCCGACCCAATTCGTGGTGGATCTGCCGGGCGTCGGCGCGGTGCTGGACAAGGGCAAACCGACCGAGCGCGTCTGCAGCGATGTGCTGTGCGGGCTGGACGTCTGGAGCAACGATATCTCCGGCCACGGCGGCCTGACCAAGCAGGGTATCGGCACCCTGGTGCTGACCGGTAACAACACCTATTCCGGCCCGACGCTGGTCAATCAGGGCCGACTGGCGATCAACGGCTCGGTCACCTCGGACGTCAGCGTGCAGAGCGGTGGCATCGTCGGCGGCAGCGGCACGCTGTTCGCGGAAGCGGGCTACAGCGTGCGGGGCGAGTGGCTGAACCTGGAGCCGTTCGTCAACCTGGCGTACGTGAACTTCGAAAACAACGGCATCGCGGAAAGCGGCGGCGCGGCGGCGCTGCGCGGCGACAAGCAGCACACGGATGCGACGGTGTCGACGCTGGGGCTGCGTGCGGACACCGCGTGGCAGGTGACCCCGGGCACGACGGTGGCGCTGCGCAGCGAGCTGGGGTGGCAACACCAGTACGGCGGGCTGGCGCGTGGCACCGGGCTGCGGTTCAACGGCGGCAACGCGCCGTTCGTGGTGGACAGCGTGCCGGTGTCGCGTGATGGCATGGTGCTGAAGGCGGGGGCGGAAGTGGCGGTGAACGAAAACGCCTCGCTGTCGCTGGGCTACGGCGGGCTGCTGTCGCAGCACCATCAGGACAACAGCGTCAACGCCGGCTTCACCTGGCGTTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MTLYGEGAFPSITDLAAHAQVSRATAYRYFPTQSALITAVVAESLGPILAWHPQDDDALKRIQQLLTLAYPQMERHEGALRAALQLSLQQWAHATPGEKFVRGNRKRLLALAVEPLQGKLPPDSLQRVIHAFSLIYGSEVFLASSYIENGKAGDPASWRSSEFNAEWGLGAIHADQAYAAGYTGKGIKLGIFDQPVYAKHPEFAGENKVINLVTEGIREYTDPYIPVKKGDTFRYDGTPSVDSDGTLGSHGTHVGGIAAGSRDGGAMHGVAFNAQIISAENGDPGPEDGIVLGNDGAVYQAGWEALVASGARIINNSWGIGITEKFDEGGYDPAYPHFTVNDAQKQFDQIKQILGTKPGGAYQGAIDAARSGVVTIFAAGNDGNLNNPDAMAGLAYFVPEIAPNWLSVASLQDPTNTGDYSISTFSSRCGYTASFCVSAPGTRVYSSVIEGTSVENLTTGYAKYSGTSMAAPHVAGSVAVLMERFPYLSGAQVAEVLKTTATDMGAPGIDALYGWGMINLGKAINGPGMLVTAEDIPAEFRIPDPTGVAYGPTQFVVDLPGVGAVLDKGKPTERVCSDVLCGLDVWSNDISGHGGLTKQGIGTLVLTGNNTYSGPTLVNQGRLAINGSVTSDVSVQSGGIVGGSGTLFAEAGYSVRGEWLNLEPFVNLAYVNFENNGIAESGGAAALRGDKQHTDATVSTLGLRADTAWQVTPGTTVALRSELGWQHQYGGLARGTGLRFNGGNAPFVVDSVPVSRDGMVLKAGAEVAVNENASLSLGYGGLLSQHHQDNSVNAGFTWRF</aaseq>

Gene Sequence

<dnaseqindica>1..426#770..2281#2494..2958#ATGACGCTGTATGGCGAGGGCGCGTTTCCATCGATCACCGATCTGGCGGCGCATGCGCAGGTATCGCGCGCGACCGCCTACCGCTACTTCCCGACCCAAAGCGCATTAATTACTGCGGTGGTGGCGGAAAGTCTGGGGCCTATTCTGGCGTGGCACCCGCAGGACGACGATGCCCTGAAGCGCATCCAGCAGTTGCTGACGTTGGCCTATCCTCAGATGGAGCGACACGAAGGGGCGCTGCGCGCCGCATTACAGCTCTCTTTGCAGCAGTGGGCGCACGCCACGCCGGGCGAAAAGTTCGTGCGCGGCAACCGCAAGCGGCTGCTGGCGCTGGCGGTAGAGCCGTTGCAGGGTAAACTGCCGCCAGATTCTTTACAGAGAGTGATTCATGCTTTCTCGCTGATTTACGGTTCTGAGGTGTTCCTGGTGCTGAAAGATATCTGGGGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACTTGAGATTGTTGTGCTTTATTTATTTGGTGTTACCAAACTGTTACACAAAAAATCTTATAAAACATTTGCAAACAACAACGGACGGTATCTGGGATGGAGAAGAAACTTAGAGGAGTCAAATCCGCTCGGGCGGCCTTCGGCTGGCCTGAAATCGGAGTTCATCGCGCACAATGGAGCGCGATGCTGATCTGCCTGACGGCGATCGGCGGCGCGCAGGCCTCCAGCTATATAGAGAACGGCAAAGCGGGCGATCCGGCTAGCTGGCGCAGCAGTGAGTTCAACGCGGAATGGGGGCTGGGGGCGATCCACGCCGACCAGGCCTACGCCGCCGGTTATACCGGAAAAGGCATCAAACTTGGCATTTTCGATCAGCCGGTCTACGCCAAGCACCCGGAGTTTGCCGGTGAGAATAAGGTGATCAATCTGGTTACCGAAGGCATCCGCGAATACACCGATCCCTATATTCCGGTGAAAAAAGGCGACACTTTCCGCTATGACGGTACGCCGAGCGTGGACTCCGATGGCACGCTCGGTTCGCACGGTACCCACGTGGGCGGCATCGCCGCCGGCAGCCGCGACGGCGGCGCCATGCATGGGGTGGCATTCAACGCGCAGATCATCAGCGCAGAAAACGGCGACCCCGGCCCGGAGGACGGCATTGTGCTCGGTAACGACGGCGCGGTTTACCAGGCCGGCTGGGAGGCGCTGGTGGCCAGCGGCGCGCGCATCATCAATAACAGTTGGGGCATCGGCATTACCGAAAAGTTTGATGAGGGGGGTTATGACCCGGCTTATCCGCATTTCACAGTAAACGATGCGCAAAAGCAGTTCGATCAGATCAAACAGATCCTCGGCACCAAGCCCGGCGGCGCCTATCAGGGCGCGATCGACGCGGCGCGCAGCGGCGTGGTCACCATCTTCGCCGCCGGTAACGACGGCAATCTGAATAACCCCGATGCCATGGCCGGCCTGGCCTATTTCGTGCCGGAGATTGCACCGAACTGGCTGTCGGTCGCCAGCTTGCAGGATCCCACCAATACCGGCGACTACAGCATCAGCACCTTCTCTTCCCGCTGCGGCTACACCGCCAGCTTCTGCGTTTCGGCGCCGGGCACCCGGGTATACAGCTCGGTGATTGAAGGCACCAGCGTGGAGAATCTGACGACCGGCTACGCCAAATACAGCGGCACCTCGATGGCGGCGCCGCACGTGGCCGGCAGCGTTGCTGTGCTGATGGAGCGTTTCCCGTATCTGAGCGGCGCACAGGTGGCGGAAGTGCTGAAAACCACCGCCACCGACATGGGCGCGCCGGGCATCGACGCGCTCTACGGCTGGGGGATGATCAACCTGGGCAAGGCTATCAACGGGCCAGGCATGTTGGTGACCGCCGAGGATATTCCGGCGGAGTTCCGTATTCCGGATCCGACGGGCGTGGCTTACGGCCCGACCCAATTCGTGGTGGATCTGCCGGGCGTCGGCGCGGTGCTGGACAAGGGCAAACCGACCGAGCGCGTCTGCAGCGATGTGCTGTGCGGGCTGGACGTCTGGAGCAACGATATCTCCGGCCACGGCGGCCTGACCAAGCAGGGTATCGGCACCCTGGTGCTGACCGGTAACAACACCTATTCCGGCCCGACGCTGGTCAATCAGGGCCGACTGGCGATCAACGGCTCGGTCACCTCGGACGTCAGCGTGCAGAGCGGTGGCATCGTCGGCGGCAGCGGCACGGTCGGTTCGCTGACCGCCCGCCGCGGCGGCACCGTGGCGCCGGGCAACTCGATCGGCACCCTGAACGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGGACCGTGACACGGCGAAGTACAGCGCGCGCACCGAACAGCTGTTCGCGGAAGCGGGCTACAGCGTGCGGGGCGAGTGGCTGAACCTGGAGCCGTTCGTCAACCTGGCGTACGTGAACTTCGAAAACAACGGCATCGCGGAAAGCGGCGGCGCGGCGGCGCTGCGCGGCGACAAGCAGCACACGGATGCGACGGTGTCGACGCTGGGGCTGCGTGCGGACACCGCGTGGCAGGTGACCCCGGGCACGACGGTGGCGCTGCGCAGCGAGCTGGGGTGGCAACACCAGTACGGCGGGCTGGCGCGTGGCACCGGGCTGCGGTTCAACGGCGGCAACGCGCCGTTCGTGGTGGACAGCGTGCCGGTGTCGCGTGATGGCATGGTGCTGAAGGCGGGGGCGGAAGTGGCGGTGAACGAAAACGCCTCGCTGTCGCTGGGCTACGGCGGGCTGCTGTCGCAGCACCATCAGGACAACAGCGTCAACGCCGGCTTCACCTGGCGTTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000483