BGIOSGA000484

From RiceWiki
Revision as of 10:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000484| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000484, complete gene.| tag = OsI_044...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000484

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000484, complete gene.

LocusTag

OsI_04446

Ensembl Transcript ID

BGIOSGA000484-TA

Ensembl Protein ID

BGIOSGA000484-PA

Length

3129

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40086688..40089816

Sequence Coding Region

40086688..40089816

Genome Context

<gbrowseImage1> name=IndicaChromosome01:40086688..40089816 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:40086688..40089816 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTGGCAGGGTATGCGCAGGCGGCGCCGCACGAGGTGAATGGCCAACCCGGCGATCCGGCCAGCTGGCGCAGCGCTGAATTCAACGCCAACTGGGGGTTGGGGGCGATCCACGCCGATGAGGCCTACGCCGCCGGCTACACCGGCAAAGGGCAAAAGGTGGGCATTTTCGACACTCCGGTTAACCGCCATCCCGAATTCGCCGGCGACGGCAAACTGATCAACGTCGTCACCGAAGGCTACCGCGCCTATACCGATCCGCACCGGCCGGGAATTAACGCCGGCGATCGCTTTTACTTCGACGGCACCTTCCACTTCTACAGCGGTTCGCAGGGCATGTTGAGCAATCACGGGGTGCACGTCGCGGGGATCAGCGCGGCGAATCGCGACGGCGTCGGCATGCACGGCGTGGCCTTCGATTCGCAGGTGATCAGCGTCGATAATGACAACGACGGCCCGGCGTACGGCGAATTCCTCGGCCTGGACGGCGCCGTCACCAATGCCGGCTGGCAGGCGATGATCAAGAGCGGCGTGCGGGTGATCAACAACAGCTGGGGCGTCAGCATTCCCGATTTCCTGTCCGACGGCGGCCGCGATCCTAACGCGCTGCACTTCGAGCTGAAGGATGCGCAGGAGCAATTCGATCAGGTCAAGCCGCTGCTCGGTAGCCTGGCCGGCGCAGGCTATCAGGGCGCCATCGACGCGGCGCGCAAAAATATTCTGGTGCTGTTCGCCGCCGGTAACGACGGCAATTACAACCAACCGGATGTGATCAGCGGGCTGGCCTACTTCGTGCCGGACATCGCGCCGAACTGGCTGTCGGTCGCCAGCGTGGCGCAGGATGCGGCATCGGCCAACAGCGTGCCTTACAGCATCAGCACCTTCTCGTCCCGCTGCGGCTACACCGCCAGCTTCTGCGTCTCGTCGCCGGGCACCCGGGTATACAGCTCGGTGATTGAAGGCACCAGCGTGGAGAATCTGACGACCGGCTACGCCAAATACAGCGGCACCTCGATGGCGGCGCCGCACGTGGACGGCAGCGTTGCTGTGCTGATGGAGCGTATCCCGTATCTGAGCGGCGCACAGGTGGCGCAAGTGCTGAAAATCAGCGGCACCGACATGGGCGCGCCGGGCATCGACGCGCTCTACGCCTGGGGGATGATCAACCTGGGCAAGGCCATCAACGGCCCGGGCATGTTCTATACCGTCGAGGATATTCCCGCAGAGTTCCGCATCCCGGATCCGACGGGCGTGGCCTACGGCCCGACCCAGTTTGTCGTCAATATTCCGGGACTGGGCGCCGAGGTGGATGCCGGTACGTTGCATGCCAGGAAGTGTGACGATATCAGCTGTGAGTTGGACGTTTACTCCAATAACATCTCCGGCCACGGCGGCCTGACCAAGCAGGGTATCGGCACCCTGGTGCTGACCGGTAACAACACCTATTCCGGCCCGACGCTGGTCAATCAGGGCCGGCTGGCGATCAACGGCTCGGTCACCTCGGCCGTCAGCGTGCAGAGCGGTGGCATCGTCGGCGGCAGCGGCACGGTCGGTTCGCTGACCGCCCGCCGCGGCGGCACCGTGGCGCCGGGCAACTCGATCGGCACCCTGAACGTGGCGGGCAACGTCAGCTTCGAGCCGGGTTCGCGCTACGCGGTGGAAGTGGGGCCGAACGGCCAGAGCGATCGGATCCAGAGCAGCGGATCGGCGACGATCGGCGGCGGCGAGGTGGCGGTGACGCTGGAGAACAGCGCCAACCTGCTGACGCAAAGCGAGGTGCGCAGCCTGCTGGGCCAGCAGTACACCATCCTGAGCGCGCAGCAGGGGGTGAGCGGGCAGTTTGACGCGGTGGTGCCGAACTACCTGTTCCTCGGCACCGGGCTGAGCTACCAGCCGGCCGGGGTGACGCTGAGCGTCGGGCGCAACGGCACAAGCTTCGCCAGCGTGGCGCAGACGCCGAACGAGCGGGCGGTGGCGGCGGCGGCGGATGCGCTGGCGGCGGGCAACCCGGTGTACGAGAGCCTGCTCAACAGCGGCACGGCGGGCGAGGCGCGGCAGGCGTTCCGTCAGCTGTCGGGGCAAATCCATGCGGATATCGCGTCGGCGCTGGTGAACGACAGCCGCTACCTGCGTGAGGCGCTGAACGGGCGGCTGCGTCAGGCGGAAGGGCTGGCGAGCTCGTCGGCCATCAAGGCGGACGAGGACGGCGCCTGGGCGCAGCTGCTGGGGGCGTGGGACCACGCGTCGGGCGACGCCAACGCCACGGGTTATCAGGCCTCGACCTACGGGGTGCTGGTGGGGCTGGACTCGGCGGCGGCGGCCGACTGGCGGCTGGGGGTGGCGACCGGCTACACCCGCACCTCGCTGCACGGCGGCTACGGGTCGAAGGCGGACAGCGACAACTACCACCTGGCGGCGTACGGCGACAAGCAGTTCGGGGCGCTGGCGCTGCGTGGCGGGGCGGGCTACACCTGGCACCGCATCGACACCAAACGGTCGGTGAACTACGGGATGCAGTCGGACCGTGACACGGCGAAGTACAGCGCGCGCACCGAACAGCTGTTCGCGGAAGCGGGCTACAGCGTGCGGGGCGAGTGGCTGAACCTGGAGCCGTTCGTCAACCTGGCGTACGTGAACTTCGAAAACAACGGCATCGCGGAAAGCGGCGGCGCGGCGGCGCTGCGCGGCGACAAGCAGCACACGGATGCGACGGTGTCGACGCTGGGGCTGCGTGCGGACACCGCGTGGCAGGTGACCCCGGGCACGACGGTGGCGCTGCGCAGCGAGCTGGGGTGGCAACACCAGTACGGCGGGCTGGCGCGTGGCACCGGGCTGCGGTTCAACGGCGGCAACGCGCCGTTCGTGGTGGACAGCGTGCCGGTGTCGCGTGATGGCATGGTGCTGAAGGCCGGGGCGGAAGTGGCGGTGAACGAAAACGCCTCGCTGTCGCTGGGCTACGGCGGGCTGCTGTCGCAGCACCATCAGGACAACAGCGTCACGCCGGCTTCACCTGGCGCTTCTGACGTTCAGCGGTCATTACAACGACCACGGAGCCGGCATGCCGGCTCCGTTTTTATTTGCGGCGGTGGGGGGAGAACGTATGATGGCGCGGCGTCAGGACAATAA</cdnaseq>

Protein Sequence

<aaseq>MALAGYAQAAPHEVNGQPGDPASWRSAEFNANWGLGAIHADEAYAAGYTGKGQKVGIFDTPVNRHPEFAGDGKLINVVTEGYRAYTDPHRPGINAGDRFYFDGTFHFYSGSQGMLSNHGVHVAGISAANRDGVGMHGVAFDSQVISVDNDNDGPAYGEFLGLDGAVTNAGWQAMIKSGVRVINNSWGVSIPDFLSDGGRDPNALHFELKDAQEQFDQVKPLLGSLAGAGYQGAIDAARKNILVLFAAGNDGNYNQPDVISGLAYFVPDIAPNWLSVASVAQDAASANSVPYSISTFSSRCGYTASFCVSSPGTRVYSSVIEGTSVENLTTGYAKYSGTSMAAPHVDGSVAVLMERIPYLSGAQVAQVLKISGTDMGAPGIDALYAWGMINLGKAINGPGMFYTVEDIPAEFRIPDPTGVAYGPTQFVVNIPGLGAEVDAGTLHARKCDDISCELDVYSNNISGHGGLTKQGIGTLVLTGNNTYSGPTLVNQGRLAINGSVTSAVSVQSGGIVGGSGTVGSLTARRGGTVAPGNSIGTLNVAGNVSFEPGSRYAVEVGPNGQSDRIQSSGSATIGGGEVAVTLENSANLLTQSEVRSLLGQQYTILSAQQGVSGQFDAVVPNYLFLGTGLSYQPAGVTLSVGRNGTSFASVAQTPNERAVAAAADALAAGNPVYESLLNSGTAGEARQAFRQLSGQIHADIASALVNDSRYLREALNGRLRQAEGLASSSAIKADEDGAWAQLLGAWDHASGDANATGYQASTYGVLVGLDSAAAADWRLGVATGYTRTSLHGGYGSKADSDNYHLAAYGDKQFGALALRGGAGYTWHRIDTKRSVNYGMQSDRDTAKYSARTEQLFAEAGYSVRGEWLNLEPFVNLAYVNFENNGIAESGGAAALRGDKQHTDATVSTLGLRADTAWQVTPGTTVALRSELGWQHQYGGLARGTGLRFNGGNAPFVVDSVPVSRDGMVLKAGAEVAVNENASLSLGYGGLLSQHHQDNSVTPASPGASDVQRSLQRPRSRHAGSVFICGGGGRTYDGAASGQ</aaseq>

Gene Sequence

<dnaseqindica>1..3129#ATGGCGCTGGCAGGGTATGCGCAGGCGGCGCCGCACGAGGTGAATGGCCAACCCGGCGATCCGGCCAGCTGGCGCAGCGCTGAATTCAACGCCAACTGGGGGTTGGGGGCGATCCACGCCGATGAGGCCTACGCCGCCGGCTACACCGGCAAAGGGCAAAAGGTGGGCATTTTCGACACTCCGGTTAACCGCCATCCCGAATTCGCCGGCGACGGCAAACTGATCAACGTCGTCACCGAAGGCTACCGCGCCTATACCGATCCGCACCGGCCGGGAATTAACGCCGGCGATCGCTTTTACTTCGACGGCACCTTCCACTTCTACAGCGGTTCGCAGGGCATGTTGAGCAATCACGGGGTGCACGTCGCGGGGATCAGCGCGGCGAATCGCGACGGCGTCGGCATGCACGGCGTGGCCTTCGATTCGCAGGTGATCAGCGTCGATAATGACAACGACGGCCCGGCGTACGGCGAATTCCTCGGCCTGGACGGCGCCGTCACCAATGCCGGCTGGCAGGCGATGATCAAGAGCGGCGTGCGGGTGATCAACAACAGCTGGGGCGTCAGCATTCCCGATTTCCTGTCCGACGGCGGCCGCGATCCTAACGCGCTGCACTTCGAGCTGAAGGATGCGCAGGAGCAATTCGATCAGGTCAAGCCGCTGCTCGGTAGCCTGGCCGGCGCAGGCTATCAGGGCGCCATCGACGCGGCGCGCAAAAATATTCTGGTGCTGTTCGCCGCCGGTAACGACGGCAATTACAACCAACCGGATGTGATCAGCGGGCTGGCCTACTTCGTGCCGGACATCGCGCCGAACTGGCTGTCGGTCGCCAGCGTGGCGCAGGATGCGGCATCGGCCAACAGCGTGCCTTACAGCATCAGCACCTTCTCGTCCCGCTGCGGCTACACCGCCAGCTTCTGCGTCTCGTCGCCGGGCACCCGGGTATACAGCTCGGTGATTGAAGGCACCAGCGTGGAGAATCTGACGACCGGCTACGCCAAATACAGCGGCACCTCGATGGCGGCGCCGCACGTGGACGGCAGCGTTGCTGTGCTGATGGAGCGTATCCCGTATCTGAGCGGCGCACAGGTGGCGCAAGTGCTGAAAATCAGCGGCACCGACATGGGCGCGCCGGGCATCGACGCGCTCTACGCCTGGGGGATGATCAACCTGGGCAAGGCCATCAACGGCCCGGGCATGTTCTATACCGTCGAGGATATTCCCGCAGAGTTCCGCATCCCGGATCCGACGGGCGTGGCCTACGGCCCGACCCAGTTTGTCGTCAATATTCCGGGACTGGGCGCCGAGGTGGATGCCGGTACGTTGCATGCCAGGAAGTGTGACGATATCAGCTGTGAGTTGGACGTTTACTCCAATAACATCTCCGGCCACGGCGGCCTGACCAAGCAGGGTATCGGCACCCTGGTGCTGACCGGTAACAACACCTATTCCGGCCCGACGCTGGTCAATCAGGGCCGGCTGGCGATCAACGGCTCGGTCACCTCGGCCGTCAGCGTGCAGAGCGGTGGCATCGTCGGCGGCAGCGGCACGGTCGGTTCGCTGACCGCCCGCCGCGGCGGCACCGTGGCGCCGGGCAACTCGATCGGCACCCTGAACGTGGCGGGCAACGTCAGCTTCGAGCCGGGTTCGCGCTACGCGGTGGAAGTGGGGCCGAACGGCCAGAGCGATCGGATCCAGAGCAGCGGATCGGCGACGATCGGCGGCGGCGAGGTGGCGGTGACGCTGGAGAACAGCGCCAACCTGCTGACGCAAAGCGAGGTGCGCAGCCTGCTGGGCCAGCAGTACACCATCCTGAGCGCGCAGCAGGGGGTGAGCGGGCAGTTTGACGCGGTGGTGCCGAACTACCTGTTCCTCGGCACCGGGCTGAGCTACCAGCCGGCCGGGGTGACGCTGAGCGTCGGGCGCAACGGCACAAGCTTCGCCAGCGTGGCGCAGACGCCGAACGAGCGGGCGGTGGCGGCGGCGGCGGATGCGCTGGCGGCGGGCAACCCGGTGTACGAGAGCCTGCTCAACAGCGGCACGGCGGGCGAGGCGCGGCAGGCGTTCCGTCAGCTGTCGGGGCAAATCCATGCGGATATCGCGTCGGCGCTGGTGAACGACAGCCGCTACCTGCGTGAGGCGCTGAACGGGCGGCTGCGTCAGGCGGAAGGGCTGGCGAGCTCGTCGGCCATCAAGGCGGACGAGGACGGCGCCTGGGCGCAGCTGCTGGGGGCGTGGGACCACGCGTCGGGCGACGCCAACGCCACGGGTTATCAGGCCTCGACCTACGGGGTGCTGGTGGGGCTGGACTCGGCGGCGGCGGCCGACTGGCGGCTGGGGGTGGCGACCGGCTACACCCGCACCTCGCTGCACGGCGGCTACGGGTCGAAGGCGGACAGCGACAACTACCACCTGGCGGCGTACGGCGACAAGCAGTTCGGGGCGCTGGCGCTGCGTGGCGGGGCGGGCTACACCTGGCACCGCATCGACACCAAACGGTCGGTGAACTACGGGATGCAGTCGGACCGTGACACGGCGAAGTACAGCGCGCGCACCGAACAGCTGTTCGCGGAAGCGGGCTACAGCGTGCGGGGCGAGTGGCTGAACCTGGAGCCGTTCGTCAACCTGGCGTACGTGAACTTCGAAAACAACGGCATCGCGGAAAGCGGCGGCGCGGCGGCGCTGCGCGGCGACAAGCAGCACACGGATGCGACGGTGTCGACGCTGGGGCTGCGTGCGGACACCGCGTGGCAGGTGACCCCGGGCACGACGGTGGCGCTGCGCAGCGAGCTGGGGTGGCAACACCAGTACGGCGGGCTGGCGCGTGGCACCGGGCTGCGGTTCAACGGCGGCAACGCGCCGTTCGTGGTGGACAGCGTGCCGGTGTCGCGTGATGGCATGGTGCTGAAGGCCGGGGCGGAAGTGGCGGTGAACGAAAACGCCTCGCTGTCGCTGGGCTACGGCGGGCTGCTGTCGCAGCACCATCAGGACAACAGCGTCACGCCGGCTTCACCTGGCGCTTCTGACGTTCAGCGGTCATTACAACGACCACGGAGCCGGCATGCCGGCTCCGTTTTTATTTGCGGCGGTGGGGGGAGAACGTATGATGGCGCGGCGTCAGGACAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000484