BGIOSGA000497

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Revision as of 10:06, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000497| Description = BGIOSGA000497| Definition = Oryza sativa Indica Group BGIOSGA000497, complete gene.| tag = | tid = BGIOSGA000497-TA|...")
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Gene Name

BGIOSGA000497

Description

BGIOSGA000497

Definition

Oryza sativa Indica Group BGIOSGA000497, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA000497-TA

Ensembl Protein ID

BGIOSGA000497-PA

Length

5255

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39828019..39833273

Sequence Coding Region

39832683..39833273,39831813..39831962,39831458..39831728,39831000..39831110,39830164..39830323
,39829456..39829713,39828935..39829057,39828498..39828575,39828019..39828223

Genome Context

<gbrowseImage1> name=IndicaChromosome01:39828019..39833273 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:39828019..39833273 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGCCCCTGGGCGCGCACGGCGCCGACCTGCTCTGCGGCCCGCGCGTCCTCCGCGCTGCGGCCCTCGCCTTCGCCTGCGCCGCCGCCTTCCTCGTCGGCTACCACTGGTCCGACTCCTCCCCGCGCCTGCTCTTCTTCTCCTCCACCGCCTCCTCCTCCTCCTCGCCGCTCCTCTCCACCGGCTCCCCTTCCGTCGCCGTCTCCCCCAACGCCAACCTCTCCTTCGACCCCTCCCTGATCCCCACCCCTGCCGCCTCCGCGCCGCCTGCTTCTCCTACTGCCAATGCCTCGCCCCCAACTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGAGAGCATGAGGGAGTACATACCCTGCCTCGACAACGAGGAAGAGATCAGGAGGCTGCCCTCGACGGAGCGTGGCGAGCGGTTCGAGCGGCACTGCCCTGCCAAGGACAAGGGTCTGAGCTGCCTCGTGCCGGCACCCAAGGGGTATAAGGCACCCATTCCTTGGCCTCGGAGCAGAGATGAGGTATGGTTTAGCAATGTACCTCACACGCGGTTGGTTGATGACAAAGGAGGGCAGAATTGGATTAGTAAAGCTAAGGATAAATTTAGATTTCCTGGAGGAGGAACTCAATTTATCCATGGAGCAAATCAATACCTGGATCAGATTTCTCAAATGGTACCAGATATTGCATTTGGCTCTCACACTAGAGTTGCCCTGGATGTTGGCTGTGGAGTAGCAAGTTTTGGTGCATACTTACTTTCACGTGATGTGTTGACATTATCCATAGCTCCCAAAGACGTTCATGAGAATCAGATACAGTTTGCTCTTGAGCGTGGTGTGCCTGCAATGGCAGCAGCATTTGCGACACACCGATTACTATATCCCAGTCAAGCATTTGACTTAATCCATTGTTCACGCTGCCGAATAAATTGGACCCACGATGATGGAATCCTGCTTCTGGAGGTTAATAGAATGCTCAGAGCCGGCGGTTATTTTGCTTGGGCAGCACAGCCTGTTTATAAGCATGAAGAGGCTCAGCAAGAAGCATGGAAAGAGATGGAAGACCTCACTGCAAGACTCTGTTGGGAGCTTGTGAAGAAAGAGGGATATATTGCTATGTGGAGGAAACCATTAAATAACTCATGCTACATGAACCGTGACCCTGGGGTCAAACCTGCACTTTGTGATCCTGATGATAATCCAGATGATGTCTGGTATGTCAATCTGAAAGCATGTATCAGCCGGCTTCCTGAAAACGGTGATGGGCCGACTCCCTTTCCATGGCCTGCACGTTTAATGGAGCCACCAAAAAGGCTTGAAGGTGTTGAAATGGATGCACACTCATCAAAGAAGGAGCTTTTCAAAGCAGAAACCAAATTTTGGGATGACATTGTTGAAGGTTATATTCGTGTTTTTAAGTGGAGAAAGTTCAAACTCCGGAATGTATTGGACATGAGGGCTGGATTTGGAGGGTTTGCAGCTGCATTGATTAATCGTAAACTTGATTGCTGGGTGATGAATGTTGTTCCTGTTAGTGAGCCAAACACACTGCCTGTAATCTATGACCGGGGACTTCTTGGAGTGGCTCATGACTGGTGTGAACCATTTGATACATATCCAAGGACATATGATCTGCTCCATGCGTTTAGCCTATTCTCGAAGGAACAGAAAAGATGTAACATCTCAAGTATCTTGCTGGAGATGGATCGAATACTCAGACCAGGCGGTAGGGCTTACATTCGTGACCTAAAACAAGTTGTACAGGATGTCAAAGAGATAACAACCGCCATGGGATGGCGATCCATCATGCGTGACACCGCAGAAGGCCCGTATGCTAGCAGGAAGGTTTTGATGTGCGACAAGCCGATGGTGCGTTAG</cdnaseq>

Protein Sequence

<aaseq>MKPLGAHGADLLCGPRVLRAAALAFACAAAFLVGYHWSDSSPRLLFFSSTASSSSSPLLSTGSPSVAVSPNANLSFDPSLIPTPAASAPPASPTANASPPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPESMREYIPCLDNEEEIRRLPSTERGERFERHCPAKDKGLSCLVPAPKGYKAPIPWPRSRDEVWFSNVPHTRLVDDKGGQNWISKAKDKFRFPGGGTQFIHGANQYLDQISQMVPDIAFGSHTRVALDVGCGVASFGAYLLSRDVLTLSIAPKDVHENQIQFALERGVPAMAAAFATHRLLYPSQAFDLIHCSRCRINWTHDDGILLLEVNRMLRAGGYFAWAAQPVYKHEEAQQEAWKEMEDLTARLCWELVKKEGYIAMWRKPLNNSCYMNRDPGVKPALCDPDDNPDDVWYVNLKACISRLPENGDGPTPFPWPARLMEPPKRLEGVEMDAHSSKKELFKAETKFWDDIVEGYIRVFKWRKFKLRNVLDMRAGFGGFAAALINRKLDCWVMNVVPVSEPNTLPVIYDRGLLGVAHDWCEPFDTYPRTYDLLHAFSLFSKEQKRCNISSILLEMDRILRPGGRAYIRDLKQVVQDVKEITTAMGWRSIMRDTAEGPYASRKVLMCDKPMVR</aaseq>

Gene Sequence

<dnaseqindica>1..591#1312..1461#1546..1816#2164..2274#2951..3110#3561..3818#4217..4339#4699..4776#5051..5255#ATGAAGCCCCTGGGCGCGCACGGCGCCGACCTGCTCTGCGGCCCGCGCGTCCTCCGCGCTGCGGCCCTCGCCTTCGCCTGCGCCGCCGCCTTCCTCGTCGGCTACCACTGGTCCGACTCCTCCCCGCGCCTGCTCTTCTTCTCCTCCACCGCCTCCTCCTCCTCCTCGCCGCTCCTCTCCACCGGCTCCCCTTCCGTCGCCGTCTCCCCCAACGCCAACCTCTCCTTCGACCCCTCCCTGATCCCCACCCCTGCCGCCTCCGCGCCGCCTGCTTCTCCTACTGCCAATGCCTCGCCCCCAACTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGAGAGCATGAGGGAGTACATACCCTGCCTCGACAACGAGGAAGAGATCAGGAGGCTGCCCTCGACGGAGCGTGGCGAGCGGTTCGAGCGGCACTGCCCTGCCAAGGACAAGGGTCTGAGCTGCCTCGTGCCGGCACCCAAGGGGTATAAGGCACCCATTCCTTGGCCTCGGAGCAGAGATGAGGTGCGCATTGGTGTTCTCTCTTTCACATTTTGACAGTGTGCTGTAAACAAAAGTTTTGATAGTGTGATGCATACAATTCTTTAGTGTATAACTCTATGCCCTATAGTACTAGGCATCGAGTATAACATGCAAGGTATTCAAAAATTGATGGATTGCCTTTGGATTTTCCGAACGTGGAACATGGGGTAGTGTTTGATTTTGTGGGTTATTACTAGCATTGTAGCAAAGCTCATACTGGGTTTTCTGTTTGCTAAGTAGAGGAGATGTCTTCTGATTCTGCCATCAGTATGAAGTATGAATTCAAATTAACTAGAGCATGATGAAACAGCATTTGAAGTACAGCATTTTATTTAATGCAAAATTAAATACTCCCTCCATTCCAAAATTCCAAAATATAAGGCATAACCACCCTTAACCCAAAGACCAAGAAACAATTACGATCACCTCCTAGTTTGGATCACCGTAACAAATGCAATGCATGCACCCAATAGAATTAGAGATCTTGATTGTGGAGGATTTAAATATAATAATTGAATAGAGAGGAGGTGCTATTTAATTGCATGCATGCATGCAGACCTCATATTATGAAATATCTGAAAAAAGTAGTTGTGCCTTATATTATGAAATGGAGGGAGTATAACCAACTGATTTGGTTTAATTTTTCAAAGACCTCTGGGTTCAGGTAAAGGAGTTTCTATAACACACTTTGATGAATTGCAGGTATGGTTTAGCAATGTACCTCACACGCGGTTGGTTGATGACAAAGGAGGGCAGAATTGGATTAGTAAAGCTAAGGATAAATTTAGATTTCCTGGAGGAGGAACTCAATTTATCCATGGAGCAAATCAATACCTGGATCAGATTTCTCAAGTATGCTGATTGTACTTTTATCTGATGAAAATTTTATCATGTTGCTGACTCTCAGTAGCACCACCTGTCTCTCTGTTCATCCAGATGGTACCAGATATTGCATTTGGCTCTCACACTAGAGTTGCCCTGGATGTTGGCTGTGGAGTAGCAAGTTTTGGTGCATACTTACTTTCACGTGATGTGTTGACATTATCCATAGCTCCCAAAGACGTTCATGAGAATCAGATACAGTTTGCTCTTGAGCGTGGTGTGCCTGCAATGGCAGCAGCATTTGCGACACACCGATTACTATATCCCAGTCAAGCATTTGACTTAATCCATTGTTCACGCTGCCGAATAAATTGGACCCACGATGGTGAGCACTCACTTTGATGTAAAGTTCTACCTTTTTTTTTCTTAGTTATGCGTTTGAGCAAAGGCAACATATTTAAGGAGTATTTAAGGAGCTAGTCTGAATTCATTCCTACGGCATAAGAAAAATATTTTATTCAAATAATGACTGGAAGTTCCTTTATTAGAAAAATAGACATGCTCAAGGCACTCAAAACATTGCAAAGATAGTGTGTTATTTTTAGCACGTGAAGACGCTTTTTCATCCAATGATTGTTTTCAACAAAATATCAACACAAAGATAACTGTTTTTTCTAGCACCCTGACTTCCAATTTGCTTAACTTTTGTTGCCATGATTTGCCACTTTAAAGATGGAATCCTGCTTCTGGAGGTTAATAGAATGCTCAGAGCCGGCGGTTATTTTGCTTGGGCAGCACAGCCTGTTTATAAGCATGAAGAGGCTCAGCAAGAAGCATGGAAAGGTATGCATTATTTCCTATGTACCCCTAGTAATTTTTGTTCCATTGTGGGGGAAACACACTAGTCTTTCATTTATTCTGTTGGTATTTTCCCACATGACGAATTCATATTTGTTCTTGTCGTTTGCATTTTTAGATTTATGACAGCTGCTCTTTTATTCCTCATTCATGCATTGCCGTTCTTTCCTTGTTTATTGTGTTGTGTATCAGCATTATGTTTCATATGCTTTGAAGCTTGAATCAACCTCCTATTATGGTCTGGAATGACATATGTCAAATTTTACGATATCTGGAGTGATTCATATGGTTATGTATACACAGTAATTTGAAGAAAAAAATTAATGCAAAATGTTTAATATGCATGGATCTCCAGATTAAATCCATGGCAAGCCTGAGGCATTCTTCCACGTGAAGTAAAGTAAATGCAAAGCTAAACTACAAATTCTTTTCATTTCTAGAAACCAACTAAAGCTGCAGATTTTTGTTATGATGTATCATGTCTAGAAATATGCATGTATTGTACAGTTCCTTGTTATGATGTATCATGTCTAGAAATATGAATGTATTGCATGGTTTTTATCAGGATTACATAATATATTGGTTTGACAGGCTTACTTTGAATGAAGTGCTTTTTTTGGTTTGTTTTGAAAGAATTGCTTGTGAACAAAATTATGTGTAGAGATGGAAGACCTCACTGCAAGACTCTGTTGGGAGCTTGTGAAGAAAGAGGGATATATTGCTATGTGGAGGAAACCATTAAATAACTCATGCTACATGAACCGTGACCCTGGGGTCAAACCTGCACTTTGTGATCCTGATGATAATCCAGATGATGTCTGGTATGTTTCGACCTCATTTTGTCCTGTTTTTATTGATGAAACCTCAATGTACCATTCTAAATCTATGTCTTTCTGGCTGCAATCGTATTGGATAAAATTTTAACAGTCACATGTGCTATTGGACCATAAAAATACATCACCATTCACTACAGTTTGTCTATATAATATTTTAATATCATTGATTTATGATGGGCTAGATGGCAATAATGTTTTCTTTTTGCATCATCATTGGTTAGATCTGTTAAACCATTCACCATTAAAACCTCATAAATGCAAAGCATATTATCAACAAAATCTGTGATAATGGCTATTCATTTTTCTGGTTATGTAGATTATACTACATCATTCAGAGGCCTTAGCTACTGTTTGATTGGACTGTTGTACTGCTGTTATGTTTTATTTGGCATGAATCTTTTTTGTGCTATTCTTTATGTTCTATTTCTCTTTCAGGTATGTCAATCTGAAAGCATGTATCAGCCGGCTTCCTGAAAACGGTGATGGGCCGACTCCCTTTCCATGGCCTGCACGTTTAATGGAGCCACCAAAAAGGCTTGAAGGTGTTGAAATGGATGCACACTCATCAAAGAAGGAGCTTTTCAAAGCAGAAACCAAATTTTGGGATGACATTGTTGAAGGTTATATTCGTGTTTTTAAGTGGAGAAAGTTCAAACTCCGGAATGTATTGGACATGAGGGCTGGATTTGGAGGGTATTTTATCTTTCTTTAAGGCCTTTTCTTCACTCTGTCCATTCTCTTTCCATTTCAAATTACCTCAGACATTGATTAGTATCCGATTTCCATGCCTTTAAGTACAGATGTTGATAAAATATATACAATGACTTGGAGGTCTAGTGGATCACAAATCTGCTTATGTCGTTGATAAGTTGATATTAGTAATATGTCATCTGTTTTCTTTGGACACTTATTGTACATAGATTCTATGCCACTTAGTTATTTCAACCGTAGTAACCTTCTGCTCTGACACTACTATACTAGGTTACAGAGGTTCTCACAAAGACAAAATAAATTGGACTTATTTTCTGTTTGGTGCGTGATATATTCTGTTTTGCGTAATATCTCATTTTGCTTGCTAATTTTTTATGCAGGTTTGCAGCTGCATTGATTAATCGTAAACTTGATTGCTGGGTGATGAATGTTGTTCCTGTTAGTGAGCCAAACACACTGCCTGTAATCTATGACCGGGGACTTCTTGGAGTGGCTCATGACTGGTATGCATTTGTATATTCTGTGGCTCTCTTATTAGGGTTTTTGTTCTATTTATAATTTATAAATGTTCCTCCTGAATTATATTGTACTGCAACCCGTAATGTTCTTAATAGAGCATACTAGTGAATAGTGGTCACTTGCATCTTCTTTCTCCTTGCCCCGTGTTCTTGTCGAACTTGAACTCCAGTGGTCAACAGTTTGATTATAATGCTTCTCGTTGACGTGTTTCTTGTTTATTTAGATATCAATGTTTGTTTCTAAGCAGTGGTGATTAGATACTTGGTGTTATTAAACTAAATCTACAAAATTTTACCTTTAAATATTGCTCATGCTGCCATTTTTGTGCCTTCCTTATTGACAGGTGTGAACCATTTGATACATATCCAAGGACATATGATCTGCTCCATGCGTTTAGCCTATTCTCGAAGGAACAGAAAAGGTAACAGTTCTTTTGATAATTAAATTCGAGTTATGTTCCTGTTTATTTTTCTCCCAAACACCTGTGTGCCTAAAGAAATATCCACACTTATGTGCCCCAACAATGTGACTATAAAAATAGCTGAACAGGTGATCTCATGCTTTATCGATACATTGCAAGATACAAAAATAGTATTCATGCTCATTCCTTTCTACGTTCTTGACTATGCTGCTAAAGATACCACTGAGTTCTGGATAAACAGTGCGTCTAACCGTAGTATCTCTGTTGTTACCAGATGTAACATCTCAAGTATCTTGCTGGAGATGGATCGAATACTCAGACCAGGCGGTAGGGCTTACATTCGTGACCTAAAACAAGTTGTACAGGATGTCAAAGAGATAACAACCGCCATGGGATGGCGATCCATCATGCGTGACACCGCAGAAGGCCCGTATGCTAGCAGGAAGGTTTTGATGTGCGACAAGCCGATGGTGCGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000497

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA000497&oldid=38221"