Os11g0247500

From RiceWiki
Revision as of 09:06, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0247500| Description = Conserved hypothetical protein| Version = NM_001074147.1 GI:115484942 GeneID:4350199| Length = 1997 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os11g0247500

Description

Conserved hypothetical protein

Version

NM_001074147.1 GI:115484942 GeneID:4350199

Length

1997 bp

Definition

Oryza sativa Japonica Group Os11g0247500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:7972602..7974598

Sequence Coding Region

7972732..7974540

Expression

GEO Profiles:Os11g0247500

Genome Context

<gbrowseImage1> name=NC_008404:7972602..7974598 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:7972602..7974598 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgccgaggatgtccaagccagcgcccgcctcctccgcgtccaagccgaggaggagggcctccccttccccgtccccctcccccgggacggcgcccaagaccgccaagaatgctgtcgctggtgctggtggtggcggccagcgtcgccgtagcccgctcaccgatctcaactccggtgacgcctccgccgcgcggggcgggtgcttcaggttcctcgtgtcgtccgcgtcgtccgggtccaggtcgaggacccccgtggcgtcccccaaggtgaagaagccccgcccggagatcgggcggcgaggccgggtggtggcggccgcggatcaggagtcgaggacccgggtggtggagaagatgatgacgagggggagggcggagacggagacggcgaggaagcatgcgccgccgccgagggggctgccgcttcttggcgaggccctgacgccgcagaggaaggcggacgcgggggccacgccggcggtgtccggggcgacgccgccgatccacgcgtcgatctcgcccgaggtgctggcgtgcgggtccgccacgccggcgtgcttcgcggcggggcaccacgtcgtgcctggggtcgccgaccgccgcaagtgccggcccaggggcatcctggccatcgccggggaaggggcgagcgaggagctcgaccccgacccgtccagggcgtcgatccactggctgtcctcaccgtcgggggaggtgcccggaacgtgctcgacgaaatgcaccaacgaggcatccgtcaactggctaccgtcgccgcgcgaggagcgcggcgtggatcttctcggcgatgagatctttgtcccgaggtgctctttggaggatgcgttctggcaaatctcccccaaatccacggggctgttgagctcacctgtgctcaatggtctattggaccttggcacgccggcatcggaattgtccgagacgacaccgtcatcaggatttcttcccctgcagaagacgccaagcaccggtgacagccttagtcccttctcactcattgtgaagagggcatcacaatcactgtcctctagaggactgaagtccttgtgttcccagcaaggaccaggcagctgcagctatggctcggcagctgatccgacagcgatctccggtgagtcatggagcagcaagtgctcagggctgacgaggacttgcagtcgccctttgacgaaaatggatccggtggtcgaatgtctcgagatgatggctctgtccccaaggcccggggatgccgattattgcggaaatggtgccttgcctgcaccattgcctgaccttagcttccagtttgcaggtgctccaatgtctctggaatccatagacttgacctcttttaagagatcaccttgtggcatagaattgaagggggagaagagtgcaagttttcagaaaccggtccttgcggacccccggatctcttggcgagaagggctggttagcaggatgtttgacatgggtgatctggactgctgcaagtggtggtctgatgatgaggatgggccagtttttcaaggcaatgaagaggctttgcgcgataccgagcttcagtcagtcatcccttcttgcctgcaggaatgtggcgaccaaacggctgcagcatgtggctttggatcggttgagttcagttgtagtggtggtggtggtgaaatgtgtaatgacagtaagccttcttcaaacccagtttcagttgcagagtcaatgagagcagaaggattcgagctcgtgtcgtccgacgactcggattggactctcttctacaagaatggcttgtttgagtcatga</cdnaseq>

Protein Sequence

<aaseq>MMPRMSKPAPASSASKPRRRASPSPSPSPGTAPKTAKNAVAGAG GGGQRRRSPLTDLNSGDASAARGGCFRFLVSSASSGSRSRTPVASPKVKKPRPEIGRR GRVVAAADQESRTRVVEKMMTRGRAETETARKHAPPPRGLPLLGEALTPQRKADAGAT PAVSGATPPIHASISPEVLACGSATPACFAAGHHVVPGVADRRKCRPRGILAIAGEGA SEELDPDPSRASIHWLSSPSGEVPGTCSTKCTNEASVNWLPSPREERGVDLLGDEIFV PRCSLEDAFWQISPKSTGLLSSPVLNGLLDLGTPASELSETTPSSGFLPLQKTPSTGD SLSPFSLIVKRASQSLSSRGLKSLCSQQGPGSCSYGSAADPTAISGESWSSKCSGLTR TCSRPLTKMDPVVECLEMMALSPRPGDADYCGNGALPAPLPDLSFQFAGAPMSLESID LTSFKRSPCGIELKGEKSASFQKPVLADPRISWREGLVSRMFDMGDLDCCKWWSDDED GPVFQGNEEALRDTELQSVIPSCLQECGDQTAAACGFGSVEFSCSGGGGEMCNDSKPS SNPVSVAESMRAEGFELVSSDDSDWTLFYKNGLFES</aaseq>

Gene Sequence

<dnaseqindica>59..1867#aatgccctcgccgccgccgccgccaccgccgccaccaaccccctgacccaccgccgccatgatgccgaggatgtccaagccagcgcccgcctcctccgcgtccaagccgaggaggagggcctccccttccccgtccccctcccccgggacggcgcccaagaccgccaagaatgctgtcgctggtgctggtggtggcggccagcgtcgccgtagcccgctcaccgatctcaactccggtgacgcctccgccgcgcggggcgggtgcttcaggttcctcgtgtcgtccgcgtcgtccgggtccaggtcgaggacccccgtggcgtcccccaaggtgaagaagccccgcccggagatcgggcggcgaggccgggtggtggcggccgcggatcaggagtcgaggacccgggtggtggagaagatgatgacgagggggagggcggagacggagacggcgaggaagcatgcgccgccgccgagggggctgccgcttcttggcgaggccctgacgccgcagaggaaggcggacgcgggggccacgccggcggtgtccggggcgacgccgccgatccacgcgtcgatctcgcccgaggtgctggcgtgcgggtccgccacgccggcgtgcttcgcggcggggcaccacgtcgtgcctggggtcgccgaccgccgcaagtgccggcccaggggcatcctggccatcgccggggaaggggcgagcgaggagctcgaccccgacccgtccagggcgtcgatccactggctgtcctcaccgtcgggggaggtgcccggaacgtgctcgacgaaatgcaccaacgaggcatccgtcaactggctaccgtcgccgcgcgaggagcgcggcgtggatcttctcggcgatgagatctttgtcccgaggtgctctttggaggatgcgttctggcaaatctcccccaaatccacggggctgttgagctcacctgtgctcaatggtctattggaccttggcacgccggcatcggaattgtccgagacgacaccgtcatcaggatttcttcccctgcagaagacgccaagcaccggtgacagccttagtcccttctcactcattgtgaagagggcatcacaatcactgtcctctagaggactgaagtccttgtgttcccagcaaggaccaggcagctgcagctatggctcggcagctgatccgacagcgatctccggtgagtcatggagcagcaagtgctcagggctgacgaggacttgcagtcgccctttgacgaaaatggatccggtggtcgaatgtctcgagatgatggctctgtccccaaggcccggggatgccgattattgcggaaatggtgccttgcctgcaccattgcctgaccttagcttccagtttgcaggtgctccaatgtctctggaatccatagacttgacctcttttaagagatcaccttgtggcatagaattgaagggggagaagagtgcaagttttcagaaaccggtccttgcggacccccggatctcttggcgagaagggctggttagcaggatgtttgacatgggtgatctggactgctgcaagtggtggtctgatgatgaggatgggccagtttttcaaggcaatgaagaggctttgcgcgataccgagcttcagtcagtcatcccttcttgcctgcaggaatgtggcgaccaaacggctgcagcatgtggctttggatcggttgagttcagttgtagtggtggtggtggtgaaatgtgtaatgacagtaagccttcttcaaacccagtttcagttgcagagtcaatgagagcagaaggattcgagctcgtgtcgtccgacgactcggattggactctcttctacaagaatggcttgtttgagtcatgagtttgtctgaattggagtggggtttccctgtccagagatgttgtgtactaattgtagcatgagaagaaccactgcgaacacaggagtttgtgtttgcctcccggccttgtacttttaattttcttttacc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0247500, RefSeq:Os11g0247500