BGIOSGA000526

From RiceWiki
Revision as of 10:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000526| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000526, complete gene.| tag = OS01G08...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000526

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000526, complete gene.

LocusTag

OS01G0837900

Ensembl Transcript ID

BGIOSGA000526-TA

Ensembl Protein ID

BGIOSGA000526-PA

Length

3483

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39366867..39370349

Sequence Coding Region

39370239..39370349,39369443..39369620,39368906..39368932,39368618..39368771,39368487..39368535
,39368292..39368406,39368090..39368181,39367790..39367946,39367606..39367670
,39367390..39367487,39367133..39367238,39366867..39367019

Genome Context

<gbrowseImage1> name=IndicaChromosome01:39366867..39370349 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:39366867..39370349 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCGCAGTGGCTCGCCGAGTACCCGCACCAGGGCGCCGACAAGCGGCCGCGGAAGCGGCCCCGCCTCGCCTGGGATGTCGCGCCCCCGCTGTTCCAGCCCCCCAAGGCAATTCCTATGCTATATTGCGGGCAGGAACTAATCAATGGAAATTTTGCGACCGCTTTTCTGCCACCGCCACCAATCTATTATACAGGACCACCACGCAATCTTTCGCCTCCCTGGAGGCCAGATGACAAGGATGGACACTATGTTTTCGCAGTTGGGGAGAACCTTACACCAAGATATAGAATACTTAGCAAGATGGGTGAAGGGACTTTTGGACAAGTCTTAGAGTGCTGGGACTTGGAACACCAAGAGACAGTGGCTATCAAAATTGTGCGCTCCCTTCAGAAATATCGAGAGGCTGCTATGATTGAAATTGATGTGCTTCAGAGGCTTGGGAAGCATGATTTTACTGGTAGCCGCTGTGTGCAAATACGGAATTGGTTTGACTATCGTAATCATATATGTATAGTATTTGAGAGGCTCGGACCAAGCTTATATGACTTCCTCCGAAAGAATAGTTATCGTGCATTTCCGATCGACCTTGTTCGGGAATTTGCCAGACAAATATTAGAGTCTGTTGCATTTATGCATGACCTGCGACTTATTCACACAGATCTGAAACCTGAGAACATTCTCCTTGTTTCATCAGAATCTATCCGGGTGCCTGATTATAAGGTTACAATACGGCCCCCAAAGGATGGTTCCTTTTTTAAGAATCTTCCAAAATCTAGTGCTATCAAGCTGATTGATTTTGGAAGTACAACATTCGAACACCAAGACCACAATTATGTGGTATCAACAAGGCATTATCGTGCCCCTGAAGTTATCCTTGGTCTTGGGTGGAATTATTCATGTGATTTGTGGAGTGTGGGATGCATTTTAGTTGAACTCTGCTCGGGTGAAGCTCTCTTTCAAACACATGAAAATTTGGAGCATTTGGCTATGATGGAGAGAGTTCTAGGTCCCCTTCCAAAACATATGATTGTCAGAGCTGATCGCCGTGCTGAAAAGTATTTCAGACGTGGATTAAGGTTGGACTGGCCAGAGGGGGCTGCCTCACGGGAAAGCCTGAAGGCAGTCTGGAAATTGCCTCGTCTGCAGAATCTGGTAATGCAACATGTTGATCATTCTGCTGGAGATCTTATAGATCTTCTTCAAGGCCTTCTTCGGTATGATCCTGATGTGCGCCTAAAGGCACGTGAAGCTCTTCAACACCCGTTCTTTACAAGATGCCACAGAAGATGTGGTTACTGA</cdnaseq>

Protein Sequence

<aaseq>MEAQWLAEYPHQGADKRPRKRPRLAWDVAPPLFQPPKAIPMLYCGQELINGNFATAFLPPPPIYYTGPPRNLSPPWRPDDKDGHYVFAVGENLTPRYRILSKMGEGTFGQVLECWDLEHQETVAIKIVRSLQKYREAAMIEIDVLQRLGKHDFTGSRCVQIRNWFDYRNHICIVFERLGPSLYDFLRKNSYRAFPIDLVREFARQILESVAFMHDLRLIHTDLKPENILLVSSESIRVPDYKVTIRPPKDGSFFKNLPKSSAIKLIDFGSTTFEHQDHNYVVSTRHYRAPEVILGLGWNYSCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPKHMIVRADRRAEKYFRRGLRLDWPEGAASRESLKAVWKLPRLQNLVMQHVDHSAGDLIDLLQGLLRYDPDVRLKAREALQHPFFTRCHRRCGY</aaseq>

Gene Sequence

<dnaseqindica>1..111#730..907#1418..1444#1579..1732#1815..1863#1944..2058#2169..2260#2404..2560#2680..2744#2863..2960#3112..3217#3331..3483#ATGGAGGCGCAGTGGCTCGCCGAGTACCCGCACCAGGGCGCCGACAAGCGGCCGCGGAAGCGGCCCCGCCTCGCCTGGGATGTCGCGCCCCCGCTGTTCCAGCCCCCCAAGGTATAATCCATGCGCTATGTGCTGCGTCGATCCGGTCTCTCTCGGGCGTGTGGGTTGCGGTGGTAGTTTTTGGCTAGATCTAGTCGTGGTTTCGCTAGATTTAGAGCGGGGCGGTTCGATCTGGGTGTGCATATTTGGGAATTGGGGATATGCTGCGCTGTTGCAGAGGATCATCGATGTGATATTGTGAATTTGTGGGATAGGATCGGAGCCAGTTGCTGATCGAAAGAACAATATGGAGAAAAGGGGCAATCTCACGACCTCCATGTGCCTAAGTGCTGCCAAATTTATGGAACTTGCTAATAAAGTTTGATATTCTGTCATTATTTTTGCTAATCGATATTGTTCTCTTTTGGTGGGACACAACCGTTACTTGAGGTATTTGTCCATTCAGTGCTGTCAAACATATGGGTTACCCGGTGTACTTCTCTATTTAGGACTATCAAACAAAACAGATAGATAACTTGGATGGTGCTAAGTGGGGTGTAAATATCATTGAACTTTGAAAACACAGGAGATCAGTATGCAGTTGTTTCTATTCATTTAGAATTTATATGCTTGTTACCAATTTTGATGTATATGGTTAATAGTAATTTACGTGGCTAATTATTTTTGTAGGCAATTCCTATGCTATATTGCGGGCAGGAACTAATCAATGGAAATTTTGCGACCGCTTTTCTGCCACCGCCACCAATCTATTATACAGGACCACCACGCAATCTTTCGCCTCCCTGGAGGCCAGATGACAAGGATGGACACTATGTTTTCGCAGTTGGGGAGAACCTTACACCAAGATGTATTTTTCCACAACTCAGTATTATTTATTGCATAGGGTTATTGTTTTTGTTTGCATTTCTGATCGCTTGCTTGGTTAGACTGTTAAACTGTTTTTCTTCTGGAGTAAGTTTATCTTGCCACAATTGTTGAAATACTGGACACAGAACTTTCATTTTGTTTGATATTTGGGACTTATGTAGCTGTTTAATGATTGTCGGTTACTGGTTAAATGCAACACCGTGTTTCAACCACCTAATTATGGGTTGAATGGCATTTCAAGCCTCATTAAATAACCATTCATTATTTACAGTCAATTAAATCAGGGTAAAATGTTTGCATACCTTTGTTCGTTGCCCAAATAACTTCTGACATTGTGTAATGGTCGTGCATTCTTGATATCTATTGCAGTTGTGTTGTCAACTGCCCTGCATCTCTACCAGCTGTACTGAACTTATGTTTTGTTGGCGATGCTTCTTTTGGTTGAGATAATTCTGAGGTTTAACCTTTGTTCTTGTCTATGGCTTTGCAGATAGAATACTTAGCAAGATGGGTGAAGGTCAGTGTGCTCCTCCTTTTCTAAATTTCAACATTTCATTTTATAAGGAATAGTTCAGGATAAATGCTTATGCTGCAAAAGTTTTGCCCTTTGTACATGTTACCAACAACTACCTTTCTTAATTTGTGTTGCAGGGACTTTTGGACAAGTCTTAGAGTGCTGGGACTTGGAACACCAAGAGACAGTGGCTATCAAAATTGTGCGCTCCCTTCAGAAATATCGAGAGGCTGCTATGATTGAAATTGATGTGCTTCAGAGGCTTGGGAAGCATGATTTTACTGGTAGCCGGTAAGCAAACTACTTTCGTCATTGCTAAGTCTTGACTCTTTATTGAGTTGATGGATTTGCATGAATGGTTCTATGCCTGCAGCTGTGTGCAAATACGGAATTGGTTTGACTATCGTAATCATATATGTATAGTAAGTACATGTGCATCAAGAAGGCTTCCTTTCATGTTTTGGATGGTCAGAATTTAATATTGAATTACTAACTTTGTCAGGTATTTGAGAGGCTCGGACCAAGCTTATATGACTTCCTCCGAAAGAATAGTTATCGTGCATTTCCGATCGACCTTGTTCGGGAATTTGCCAGACAAATATTAGAGTCTGTTGCATGTGGGTATTCAGTTAATTTCTGCTGTTTGTTGGTTATGCAAATTAACGTTTTGTTTTATCTTGCCCCTAACAGTATTATTCTAATGTTTATTTTATTGTAATATTTGCAGTTATGCATGACCTGCGACTTATTCACACAGATCTGAAACCTGAGAACATTCTCCTTGTTTCATCAGAATCTATCCGGGTGCCTGATTATAAGGTGGCTTCAATACAAAATTTTGTCATTCGAACTATAATCTTTTGCAATTTTATCCGTTAACACTTGTGGTTGCCATTACATTATGTCAATTAGTACGAGCATACATTTATTTTTTACTGATTTTTATATTGTTTTCCATAAAGGTTACAATACGGCCCCCAAAGGATGGTTCCTTTTTTAAGAATCTTCCAAAATCTAGTGCTATCAAGCTGATTGATTTTGGAAGTACAACATTCGAACACCAAGACCACAATTATGTGGTATCAACAAGGCATTATCGTGCCCCTGAAGTTATCCTTGGTATTAACATCATATCCTTTTCCATTTCCCCCCTATAAAGTGGAACACATAATTATATTACTGTGTTTTGTTTATGGTACCTTTGTTTAGTTATTTCCTTTCTCTATTTTCATTTGCAGGTCTTGGGTGGAATTATTCATGTGATTTGTGGAGTGTGGGATGCATTTTAGTTGAACTCTGCTCGGTTAGTTCACACTATCTATACCTGAGTAGTTCCTTGATTTTCTCTATAGCCCAGTGCCGGCTCCGCGAATTTGCAGTGCTTCCTATTGATATGTTGCCTCTTTGATTTTCTCTACTAGGGTGAAGCTCTCTTTCAAACACATGAAAATTTGGAGCATTTGGCTATGATGGAGAGAGTTCTAGGTCCCCTTCCAAAACATATGATTGTCAGAGCTGAGTATGTATACAAGATCTTCGTTATAGTTTCATGATTTATTATAATCTAAGATAAGATGGTTTACATCTAGGCTTAGGTTGCTGCTGAGTTTCATCTGAAGTTCTTTCAAATTATCAATCACTTGCATGTACTTGTTACTTCTTTTTTACAGTCGCCGTGCTGAAAAGTATTTCAGACGTGGATTAAGGTTGGACTGGCCAGAGGGGGCTGCCTCACGGGAAAGCCTGAAGGCAGTCTGGAAATTGCCTCGTCTGCAGGTACTTTGTTATCTGATGTAGTCAGTATGTTCCTCTTAGCATTTTCCCCTCTTTGCCAAGTGTCGCTCATAGGTGGTATCCTCTTGACACTCGAATTGTGCTAACTCATGCAGAATCTGGTAATGCAACATGTTGATCATTCTGCTGGAGATCTTATAGATCTTCTTCAAGGCCTTCTTCGGTATGATCCTGATGTGCGCCTAAAGGCACGTGAAGCTCTTCAACACCCGTTCTTTACAAGATGCCACAGAAGATGTGGTTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000526

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA000526&oldid=38250"