BGIOSGA000527

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Revision as of 10:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000527| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000527, complete gene.| tag = OsI_043...")
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Gene Name

BGIOSGA000527

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000527, complete gene.

LocusTag

OsI_04357

Ensembl Transcript ID

BGIOSGA000527-TA

Ensembl Protein ID

BGIOSGA000527-PA

Length

4045

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39358893..39362937

Sequence Coding Region

39362718..39362937,39361405..39361520,39361065..39361310,39360476..39360556,39360060..39360293
,39358893..39359243

Genome Context

<gbrowseImage1> name=IndicaChromosome01:39358893..39362937 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:39358893..39362937 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGTCGCGGGCGGTGGGGAGGAGGGGGAGGAGCTGCTCCTGCTCTCCGCCGTCGAGGCCGGTTCCTTCGGCGGCGGTGGCGACGGTGGCGGCGCGGGCGCAGCGGCGGAGAAGTCGTGGCGCCTCAACTTCGACGGCTTCCGACCGCCGGAGGTGCAGCAGGAGAGGCGGCCGCCCCGCGGGCTCCACCACCACTGCCTCGGCGTCCTATCTCAAGGTCCTGAGGACGTAGTTGCTGAATACTACCAACAGCAAGTGGAAATGCTAGAGGGCTTTAATGAAATGGATACACTTACTGATCGTGGTTTTCTTCCAGGAATGTCCAAGGAAGAGCGTGAGAAGGTTGCTAGGAGTGAGACTTTAGCCATCCGGCTATCGAACATAGCAAACATGGTTCTTTTTGCTGCGAAAGTGTATGCTTCTGTGAGAAGTGGTTCACTTGCTATTATTGCTTCGACTTTGGATTCTCTTCTTGACTTGTTGTCAGGATTTATCTTGTGGTTTACTGCCTTCTCTATGCAAACACCAAATCCCTACAGATACCCTATTGGTAAAAAGCGTATGCAGCCACTGGGAATACTTGTCTTTGCCTCTGTTATGGCGACACTTGGCCTTCAGATCATCCTAGAATCAGTACGCTCGTTGTTGTCTGATGGGGATGAGTTCAGCTTGACAAAAGAGCAAGAAAAGTGGGTTGTGGACATCATGCTTGCAGTGACATTAGTGAAACTTGCCCTTGTTTTATATTGCCGGACATTCACAAATGAAATAGTGAAGGCTTATGCACAGGATCATTTTTTTGATGTCATCACAAATATGATTGGTCTTGTTGCTGCACTACTAGCGACTTATATCGAAGGTTGGATCGACCCAGTTGGTGCAATCATCCTAGCAATCTACACGATCAGAACATGGTCGATGACGGTGCTCGAGAACGTCCACTCCCTGGTCGGGCAGTCAGCCTCGCCGGAATACCTTCAGAAGCTGACCTACCTATGCTGGAACCACCACAAGGCCGTGAGGCACATAGACACGGTGCGGGCGTACACGTTTGGCTCCCATTACTTCGTCGAGGTGGACATCGTGCTGCCGTCAAGCATGCCGCTGCAAGAGGCGCACGACATCGGCGAGGCCCTGCAGGAGAAACTGGAACGCCTGCCTGAGATCGAGCGAGCGTTCGTGCACCTCGACTACGAGTTCACCCATCGGCCCGAGCACGCTCTGTCCCATGAAAAATAG</cdnaseq>

Protein Sequence

<aaseq>MAAAVAGGGEEGEELLLLSAVEAGSFGGGGDGGGAGAAAEKSWRLNFDGFRPPEVQQERRPPRGLHHHCLGVLSQGPEDVVAEYYQQQVEMLEGFNEMDTLTDRGFLPGMSKEEREKVARSETLAIRLSNIANMVLFAAKVYASVRSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYRYPIGKKRMQPLGILVFASVMATLGLQIILESVRSLLSDGDEFSLTKEQEKWVVDIMLAVTLVKLALVLYCRTFTNEIVKAYAQDHFFDVITNMIGLVAALLATYIEGWIDPVGAIILAIYTIRTWSMTVLENVHSLVGQSASPEYLQKLTYLCWNHHKAVRHIDTVRAYTFGSHYFVEVDIVLPSSMPLQEAHDIGEALQEKLERLPEIERAFVHLDYEFTHRPEHALSHEK</aaseq>

Gene Sequence

<dnaseqindica>1..220#1418..1533#1628..1873#2382..2462#2645..2878#3695..4045#ATGGCGGCGGCGGTCGCGGGCGGTGGGGAGGAGGGGGAGGAGCTGCTCCTGCTCTCCGCCGTCGAGGCCGGTTCCTTCGGCGGCGGTGGCGACGGTGGCGGCGCGGGCGCAGCGGCGGAGAAGTCGTGGCGCCTCAACTTCGACGGCTTCCGACCGCCGGAGGTGCAGCAGGAGAGGCGGCCGCCCCGCGGGCTCCACCACCACTGCCTCGGCGTCCTATGTACGATCTCTCTCCAACTCGCCGTCGCGAGCTTGCTACCCTTGTACCGTGTGATGTTTATGGTCTTATGGATATATTGTTGTGTTCGTATGCTTGGTTGCTTGATCTAGGCTTTCATTCGTTTGCCTTTTCTCGTGTGTTGGCAACATGGTTCATTTGTTTTGGTAGTTGCCTTTTGCAATAGATATCTACTAAAGTAACTTATTTTTATCTGCTTTCTATAAAAGCAGTTCCGTTTAGGCCTTTATAATATAAAAAGGCAGTAACTCCTTTTATTTTTCGTTTCAGCAACTAGCAAGAGCTCAGCTGTGCTAGTATAGATGGGGATTGGATTAGGATGTTGACGGTAGTGGTAGGCTAGATTCTTCGTGTGCAACCTTTGGCAGATAAGAATAGGAATGGGGAATGTTATATTGGTGGAATGAGGAATTTGTTGTTTCTAGCTTTCTGATATTGCCTAGTTGCCTATACTATCGTGCTCATCTGGGGCAGGGCAGGACGGTCCTCACGTGAGCTGCTCTGTTCTTGGAGTGCACGTGAACAGAGTTCTAAGAGAACTTTTTTTTTTTTATCAGCGGGGGTGGTTAGCACTGAGCCGAGTTGTAAAGACTGGGGCACTGGGTGTGGGTGACTGACAGCGTGAGAAGGGCACCAGGTGTCTTAGCGTTCATGTATTGTCACAATTATTTTACCCTTTTATGCAATTTTAGAGGTTTTGTTCTGGTTAACAAAGTTGCATTGGGCACAAAAAGTTGAATTAATAACCCAATCATGTCATTTGGCCGCACTCAACATTTGGGGTTTGGATATCTAGTAGTCGTTTCTCTCACGTATTGTCAATCACTGCTTTCCCATGGCTATAGAAGTAGGGAGTCCTTGTGGGCTTAAAGTCGTGGTCTATTGGTGGTTGAATTCAAGGCCCCACAATCCTAGTACTAGTAGTACTATTTAAATCAGAATTGAGATTTTTATCCTGTACATTTCAATAGCTGTAGCATTTTATTCAGTAGTTCTACATGTGATATAATCAATAGATGAAATATAATTAATTAGATATCAGAGTTATCAGGTTCACTGAGAAGTGGTATAATTCAGTAGAACATGTGAAGCAAACATGCCTGCTTGCTCCACTAATGTCACTATCTTTCTTCATGCTGGACATAATTTTCTGTGATTGATGTACGATTCTATCTTCAGCTCAAGGTCCTGAGGACGTAGTTGCTGAATACTACCAACAGCAAGTGGAAATGCTAGAGGGCTTTAATGAAATGGATACACTTACTGATCGTGGTTTTCTTCCAGGAATGTCCAAGGTATGTTTGATAAGCTTTTCTGTTGTAACAGTAGGGAAGACAAATTGTTTAACTACTGCATTGCAACACTGAACATAAATTTATTTGCCTGTAGGAAGAGCGTGAGAAGGTTGCTAGGAGTGAGACTTTAGCCATCCGGCTATCGAACATAGCAAACATGGTTCTTTTTGCTGCGAAAGTGTATGCTTCTGTGAGAAGTGGTTCACTTGCTATTATTGCTTCGACTTTGGATTCTCTTCTTGACTTGTTGTCAGGATTTATCTTGTGGTTTACTGCCTTCTCTATGCAAACACCAAATCCCTACAGATACCCTATTGGTAAAAAGCGTATGCAGCCACTGGTGAGTCCTATCACAAGATTACCTTCATGTTTGCCATGCTTATTCTTCTTACTGTAATTTATGCAATTGATTCCAAGGGACTCAACTCTCGGCTATTCATGATGCATAGCCAGTTACTCCCTGTGATGTTCTTTTTTCCGCAAAATGAAAAGAAAAAGTGGAAATGCTCCAGGAATGAAAAGAAACTAAACTATTGCAAACATTCCTGGCAGATGGACCATAGTAACATGCGGAATTTTGTGTTTTGAGGATTTTCATAGTTACTAGAAATCACGTTCCCAATTTCCCCCAGATATCTCTTGCTCTTAGGTCAATGCTACTGTATCAATATCTTTGCTACTCCGGCAGCAGACAATTTATGCATGGAAATATTTGTGATAAGTCCTTCAGTCTAATTTCACTAAATGATCGAGTTTATCGCTTCTCTTTTCACTTAGTATTATCAGTCATACACTTTTAAGTTCCAAATTTCAATATGTTGACTGTTCCATCACAATATCTTCTTCAGGGAATACTTGTCTTTGCCTCTGTTATGGCGACACTTGGCCTTCAGATCATCCTAGAATCAGTACGCTCGTTGTTGTCTGATGTAAGTCTGCTGATGTTTTGTTGGCCTTGAACTCCTACTCTCATTTTGCTTTTGACCAGAAACTTTGCCTGAGGATTTCTTTTCTAGAACGATAAGTGTCTTTGATGTTTGTTGGCTTTGAAATTCTGTTGTAGCTTGCCATATACCTTTCTGATTGCTGAACTTATTGTCTTGTTCTCCAGGGGGATGAGTTCAGCTTGACAAAAGAGCAAGAAAAGTGGGTTGTGGACATCATGCTTGCAGTGACATTAGTGAAACTTGCCCTTGTTTTATATTGCCGGACATTCACAAATGAAATAGTGAAGGCTTATGCACAGGATCATTTTTTTGATGTCATCACAAATATGATTGGTCTTGTTGCTGCACTACTAGCGACTTATATCGAAGGTTGGATCGACCCAGTTGGTGCAATCATCGTAAGTACCAAAAAGTTTTCTCCTGTTCCATTGCAGTAGTGTAAAACTAGAATTCAAGTAAATGCTATATTTGATCTAATCGTTAATTTGGAGCTAGGCACATCATCCTGATTGGGAATTGACTGGGAAAAGTAACTAGTTTCTGCCAATTTTCCATGTATCATGATATATTCTTTCAAAAAAGGAAAACATACCATGATGAAAAGATCAGCTATGACTTTATTGTAACCAGAGATGCAAATCCTGGCAGTACCAGTTACTGCCATTTATCCACGAGCTGGTTTGTTCGTACTGGCCAGAACAACTTAAATTTTAATTTGGAATACACATTTTGTACAACACCATGCATAGTCATATTCATATGTTTTATGAACAACTACACATTAGCTATATCAAAAGTTTGAATCCAAAGTTTTGAACTAAAAAACCGGCTCGATTTGTTATGGATGTTACAGGTTTTTGAATTAGTGTTTGATTTTGCTCTTTTGTCCGGTAAAAACCAGTAACTGGCAATTACCGGTTTCTTAGAGGGACCAATATTTTTTTTTCCTTCAAAACTGGTGTCCATAACCTTGACAGTGACTTGGTTTAAAAGAGAGAATATTTCTAGTCTGCCTGACTAAATTCCTCTACTGAAAGTCTGATGAAATAGCTTCCAGTGGTTTCCATCGTCCTGGGTGTGTAGTCCTTTGCAACGTCCAAACGTTTCAAACATGAGAATTACTCAAGAATCTTGTATTCCAAACGTTTCCTTAGGTTTTCGTTAAGAAAAACACGCTGTATTTCAGAGACTACTTTCTGTTTTCTCGTTTGCAGCTAGCAATCTACACGATCAGAACATGGTCGATGACGGTGCTCGAGAACGTCCACTCCCTGGTCGGGCAGTCAGCCTCGCCGGAATACCTTCAGAAGCTGACCTACCTATGCTGGAACCACCACAAGGCCGTGAGGCACATAGACACGGTGCGGGCGTACACGTTTGGCTCCCATTACTTCGTCGAGGTGGACATCGTGCTGCCGTCAAGCATGCCGCTGCAAGAGGCGCACGACATCGGCGAGGCCCTGCAGGAGAAACTGGAACGCCTGCCTGAGATCGAGCGAGCGTTCGTGCACCTCGACTACGAGTTCACCCATCGGCCCGAGCACGCTCTGTCCCATGAAAAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000527