BGIOSGA000555

From RiceWiki
Revision as of 10:07, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000555| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000555, complete gene.| tag = B1088C0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000555

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000555, complete gene.

LocusTag

B1088C09.40

Ensembl Transcript ID

BGIOSGA000555-TA

Ensembl Protein ID

BGIOSGA000555-PA

Length

2664

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38916064..38918727

Sequence Coding Region

38917312..38918727,38916064..38916282

Genome Context

<gbrowseImage1> name=IndicaChromosome01:38916064..38918727 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:38916064..38918727 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCAGCCGCCGCGTCGTCCACGCCCCTCTTCTCGCCCTGCTGCGCCGCCGCGACCGCCAAGCTCGGGGCGGCGTGCCCGTCGTCGTACGGATCCCGGCGGAGGCCGTGCACGCGCCGTGGACGCCTCTCGGTGGTGGCCGTGCAGACGGGCCCGCAGAAGCCATCGCCGTCGTCGTCGTCCCAGGCGGGGACAGAATCGGAGACGCTGCAGAACCTGCTGAAGAGGGAGTACAAGTATGGGTTCGTGTCTGATTTCGAGTCCTTCTCCATCCCCAAGGGGCTCTCCGAGGCCACGGTCCGCCGCATCTCGGAGCTCAAGGCGGAGCCGGCGTGGATGCTCGACTTCCGCCTCGCCGCCTACCGCCGGTTCCTGACCATGGTGCAGCCCACCTGGAGCGACAACGTGTACGAGCCGGTGGATCTCCAGTCCATCTGCTACTACTCCGCGCCCAAGACCAAGCCCAAGCTCAACAGCCTCGACGAGGTCGACCCGGAGCTTCTCAACACCTTCGATCGCCTCGGGATCCCGCTCAGCGAGCAGAAGCGCCTCGCCAACGTCGCCGTCGATGCCGTCATCGACTCCACCTCCATCGCCACCACCCACCGGGAGGAGCTCATGAAGAAGGGCGTCATCTTTTGCTCCATTTCCGAGGCCATCCGCGAGTACCCGGACCTTGTCAAGCGCTACCTTGGCAGCGTCGTGCCGCCGGCAGATAACTACTATGCTGCCCTCAATTCGGCCGTGTTCAGCGATGGGTCGTTCTGCTATGTGCCCAAGGATACGGTTTGCCCAATGGAGATATCGACATACTTTAGGATCAACGACAAGGAGACCGGGCAATTTGAGAGGACTCTAATTGTGGCTGATGAGAGGAGCACGGTTAGCTATCTGGAAGGGTGTACTGCTCCAGCTTATGACTCCAACCAGCTCCATGCGGCGGTTGTGGAGCTTGTGTGTGAGGAGCAGGCAGAGATCAAGTACTCTACGGTGCAGAATTGGTACTCTGGTGATGAGGAGGGGAAGGGGGGCATTTACAACTTTGTTACTAAGAGAGGACGGTGCAAAGGGCGGGGCTCTAAGATCTCATGGACACAGGTTGAGACAGGTTCAGCAATTACATGGAAGTACCCAAGTGTGGAGCTTCTTGGGGATGATACTGTTGGAGAGTTCTACTCAGTTGCACTGACGAAGGATTACCAGCAGGCAGACACAGGGACAAAAATGATCCACAAGGGAAAGAATTCGCGGAGTCGGATTATATCCAAAGGTATCTCAGCTGGGAAGTCACGGAATTGCTACCGTGGGTTGGTCCAGATAAACTCAGGCGCAGAAAATGCTTATAATTCTTCACAGTGTGATTCTTTGCTGATTGGGGATAACGCTGCTGCCAACACCTATCCGACTATTCAGGTGGGTTGCATTTCTAGTCGTGTTGAGCATGAGGCAAGCACTTCAAAAATAGGGGAGGACCAGCTATTTTATTTCCAACAAAGGGGGATAGACCATGAAAAGGCTGTTGCAGCGATGATTGGTGGATTCTGCAGGGCTGTTTTCGAGAATCTTCCTTACGAGTTTGCACATGAGATGGATGCACTTATGAACCTGAAGCTTGAGGGATCAGTTGGTTAA</cdnaseq>

Protein Sequence

<aaseq>MAAAAASSTPLFSPCCAAATAKLGAACPSSYGSRRRPCTRRGRLSVVAVQTGPQKPSPSSSSQAGTESETLQNLLKREYKYGFVSDFESFSIPKGLSEATVRRISELKAEPAWMLDFRLAAYRRFLTMVQPTWSDNVYEPVDLQSICYYSAPKTKPKLNSLDEVDPELLNTFDRLGIPLSEQKRLANVAVDAVIDSTSIATTHREELMKKGVIFCSISEAIREYPDLVKRYLGSVVPPADNYYAALNSAVFSDGSFCYVPKDTVCPMEISTYFRINDKETGQFERTLIVADERSTVSYLEGCTAPAYDSNQLHAAVVELVCEEQAEIKYSTVQNWYSGDEEGKGGIYNFVTKRGRCKGRGSKISWTQVETGSAITWKYPSVELLGDDTVGEFYSVALTKDYQQADTGTKMIHKGKNSRSRIISKGISAGKSRNCYRGLVQINSGAENAYNSSQCDSLLIGDNAAANTYPTIQVGCISSRVEHEASTSKIGEDQLFYFQQRGIDHEKAVAAMIGGFCRAVFENLPYEFAHEMDALMNLKLEGSVG</aaseq>

Gene Sequence

<dnaseqindica>1..1416#2446..2664#ATGGCCGCAGCCGCCGCGTCGTCCACGCCCCTCTTCTCGCCCTGCTGCGCCGCCGCGACCGCCAAGCTCGGGGCGGCGTGCCCGTCGTCGTACGGATCCCGGCGGAGGCCGTGCACGCGCCGTGGACGCCTCTCGGTGGTGGCCGTGCAGACGGGCCCGCAGAAGCCATCGCCGTCGTCGTCGTCCCAGGCGGGGACAGAATCGGAGACGCTGCAGAACCTGCTGAAGAGGGAGTACAAGTATGGGTTCGTGTCTGATTTCGAGTCCTTCTCCATCCCCAAGGGGCTCTCCGAGGCCACGGTCCGCCGCATCTCGGAGCTCAAGGCGGAGCCGGCGTGGATGCTCGACTTCCGCCTCGCCGCCTACCGCCGGTTCCTGACCATGGTGCAGCCCACCTGGAGCGACAACGTGTACGAGCCGGTGGATCTCCAGTCCATCTGCTACTACTCCGCGCCCAAGACCAAGCCCAAGCTCAACAGCCTCGACGAGGTCGACCCGGAGCTTCTCAACACCTTCGATCGCCTCGGGATCCCGCTCAGCGAGCAGAAGCGCCTCGCCAACGTCGCCGTCGATGCCGTCATCGACTCCACCTCCATCGCCACCACCCACCGGGAGGAGCTCATGAAGAAGGGCGTCATCTTTTGCTCCATTTCCGAGGCCATCCGCGAGTACCCGGACCTTGTCAAGCGCTACCTTGGCAGCGTCGTGCCGCCGGCAGATAACTACTATGCTGCCCTCAATTCGGCCGTGTTCAGCGATGGGTCGTTCTGCTATGTGCCCAAGGATACGGTTTGCCCAATGGAGATATCGACATACTTTAGGATCAACGACAAGGAGACCGGGCAATTTGAGAGGACTCTAATTGTGGCTGATGAGAGGAGCACGGTTAGCTATCTGGAAGGGTGTACTGCTCCAGCTTATGACTCCAACCAGCTCCATGCGGCGGTTGTGGAGCTTGTGTGTGAGGAGCAGGCAGAGATCAAGTACTCTACGGTGCAGAATTGGTACTCTGGTGATGAGGAGGGGAAGGGGGGCATTTACAACTTTGTTACTAAGAGAGGACGGTGCAAAGGGCGGGGCTCTAAGATCTCATGGACACAGGTTGAGACAGGTTCAGCAATTACATGGAAGTACCCAAGTGTGGAGCTTCTTGGGGATGATACTGTTGGAGAGTTCTACTCAGTTGCACTGACGAAGGATTACCAGCAGGCAGACACAGGGACAAAAATGATCCACAAGGGAAAGAATTCGCGGAGTCGGATTATATCCAAAGGTATCTCAGCTGGGAAGTCACGGAATTGCTACCGTGGGTTGGTCCAGATAAACTCAGGCGCAGAAAATGCTTATAATTCTTCACAGTGTGATTCTTTGCTGATTGGGGATAACGCTGCTGCCAACACCTATCCGACTATTCAGGTAACTGCTCTGCTGTTCTTGATTTGCCTGGCATGAAGGGCCAATTGCATTTTTATAATGCAAACTATTAAGAGTAGGTTGTTAATCCTTTGTTCTGTATGTCATTTTTCAGTTTCTGTTTTACAAAAGCAAAAGAGCATGTATAAATTAATAGGGGCTTTGATAATTTTGCAAGTTGGAGGGTTTCATATTAATCTTCGTAGTCCTTGGTTACAATCAGTCTTCTCCATTTAAGTTTCAATATATTGACATGCAAAGTAAATGGTAATGACACCCTTTTTGGGAATACACACTGTTCCATATATTAGAAGAAATATGGTCGCCGTTGATTCCATATTACTGAATTTAACTTTTATGCTGGCTAAAAACTATAAGAGTCAAACTATTGGTTTAGTCCAATTTATCTTATGGTTAGAAAATCTCCTGCCATGCACGTTTTCATGTTCAAAAGCAGGAAAAATCTCATACTAATTCATCTGGAACATTTATATGATACTGATGGCGTATAGCCAGCACAACTTTAGTACCGCTTCAGGTTTCATCATGCTCCCATTCAAATACACCTTTAGATGACCTTTTAGCTTTCCGCCCTTCAGCACCCTAGCCGCCTTCGGCCTTCCTAACAAGCGCTCGGGCCTCCTTTGCGCTGCCTTCCTCATAGAAGCCGCTGGGTTGACCCCGTTTGTCTAATAGTGTCATGCATTCTTTCTGCAATATCACTGTACCTTTAAGTTGCTTACCATCACCTCTAGGCTACTCGCTTAGTTCCAGCAGTTAATGTTTCTCATGGTATTCTTGATGGCCCATTGTGATCTTGAGCTAGACATGAGTTATCTCTGTGCACGCATGTCCTATGCACAAGCACTTCCATAATCTGCAATTACATGTATTTGCAGTTTTGAATACAGATGTGTAACTAATGAGCCTCCAGTACTATACTTATGCCTAAAATGCGTATCATCTATTTCTTTATCTAATATGGCTGAAATTACATACACTAACATTCTGTTCCAACTTGCGTGATAACAGGTGGGTTGCATTTCTAGTCGTGTTGAGCATGAGGCAAGCACTTCAAAAATAGGGGAGGACCAGCTATTTTATTTCCAACAAAGGGGGATAGACCATGAAAAGGCTGTTGCAGCGATGATTGGTGGATTCTGCAGGGCTGTTTTCGAGAATCTTCCTTACGAGTTTGCACATGAGATGGATGCACTTATGAACCTGAAGCTTGAGGGATCAGTTGGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000555