Os11g0249400
| Gene Name |
Os11g0249400 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001074152.2 GI:297611568 GeneID:4350206 |
| Length |
1397 bp |
| Definition |
Oryza sativa Japonica Group Os11g0249400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 11:8087054..8088450 |
| Sequence Coding Region |
8087054..8087302,8087363..8087618,8087696..8088450 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008404:8087054..8088450 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008404:8087054..8088450 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgccgcgccgcgctcatgctcatgccgccgtcgccgcgcacttgctggtgtcggcgttcgttgcggcggcggcggcggcggcggcgacgtacaatgtcatcgactatggcgcggtgggcgacgacggcggggtgacggacagcgcgcgggcgttcgaggccgcgtgggcggcggcgtgcgcgggcgacgcggcggcggcggcggcgacggtggtcgtgccggcgggcggggtgtacctggtgtccagggcgaggttcgccgggccgtgccggagcggcgcggtggccgtgaacatgacgggcgccacggtggtcgcgcccgtgccgtacgccggcgtgcagctgtggatcgtgttccaggacgtggacggcgtgtccgtcgccggcgggacgctggacggccgcggccgcgcgctctgggcgtgccggcgcgcacgccgccccgactgcccgcccgccacgaggtcgctgacgatataccggtcgaggaacgtggcggtgcgcgggctgacgtcgcgggacagcgccgggatccacatcaccgtgcaggcgagcgccggcgtggcgatcgtggacacggtggtgtcggcgccggggcgcagccccaacaccgacggcatccacatcaagcagtccaccggcgtgaccgtccgcaacgccgtcatcggcaccggcgacgactgcgtctccatggtcgagggctcctccgacgtcctgatcgaggccgtcacttgcggccccggccacggcatcagcatcgggagcctgggggacacgccggagcaggtggcggtgcggaacatcaccgtgaagggcgcggcgctcgccgggacgacgaacgggctgcggatcaagacgtgggcgaaggcgaacgccggcgcggtcgccggcgtctccttctccggcgtcgtcatgcggaacgtcagcaacccgatcatcgtcgaccagaactactgccccggcaacgccagctgcccaaccgaggcacgcagccctgaaacctgtgacctcgggtcggggatcgagatcagcggcgtgtcgtacacggacatcgaggggacgtcggcgacggcgacggcggtgaggttcgactgcagcccgagccggccgtgcgccgggatcgccatgagggacgtccggctgaggtaccagccaccggcggcggcggcggaggaggagcagccggcggcgtcgttctgccggaacgcgcacggggtggcgtttggggacgtcgatccaccgagctgtctaaccgagtag</cdnaseq> |
| Protein Sequence |
<aaseq>MPRRAHAHAAVAAHLLVSAFVAAAAAAAATYNVIDYGAVGDDGG VTDSARAFEAAWAAACAGDAAAAAATVVVPAGGVYLVSRARFAGPCRSGAVAVNMTGA TVVAPVPYAGVQLWIVFQDVDGVSVAGGTLDGRGRALWACRRARRPDCPPATRSLTIY RSRNVAVRGLTSRDSAGIHITVQASAGVAIVDTVVSAPGRSPNTDGIHIKQSTGVTVR NAVIGTGDDCVSMVEGSSDVLIEAVTCGPGHGISIGSLGDTPEQVAVRNITVKGAALA GTTNGLRIKTWAKANAGAVAGVSFSGVVMRNVSNPIIVDQNYCPGNASCPTEARSPET CDLGSGIEISGVSYTDIEGTSATATAVRFDCSPSRPCAGIAMRDVRLRYQPPAAAAEE EQPAASFCRNAHGVAFGDVDPPSCLTE</aaseq> |
| Gene Sequence |
<dnaseqindica>1149..1397#833..1088#1..755#atgccgcgccgcgctcatgctcatgccgccgtcgccgcgcacttgctggtgtcggcgttcgttgcggcggcggcggcggcggcggcgacgtacaatgtcatcgactatggcgcggtgggcgacgacggcggggtgacggacagcgcgcgggcgttcgaggccgcgtgggcggcggcgtgcgcgggcgacgcggcggcggcggcggcgacggtggtcgtgccggcgggcggggtgtacctggtgtccagggcgaggttcgccgggccgtgccggagcggcgcggtggccgtgaacatgacgggcgccacggtggtcgcgcccgtgccgtacgccggcgtgcagctgtggatcgtgttccaggacgtggacggcgtgtccgtcgccggcgggacgctggacggccgcggccgcgcgctctgggcgtgccggcgcgcacgccgccccgactgcccgcccgccacgaggtcgctgacgatataccggtcgaggaacgtggcggtgcgcgggctgacgtcgcgggacagcgccgggatccacatcaccgtgcaggcgagcgccggcgtggcgatcgtggacacggtggtgtcggcgccggggcgcagccccaacaccgacggcatccacatcaagcagtccaccggcgtgaccgtccgcaacgccgtcatcggcaccggcgacgactgcgtctccatggtcgagggctcctccgacgtcctgatcgaggccgtcacttgcggccccggccacggcatcaggtgagcgacacagccgaaatccatgtcgtctgctcgaagatgctcagagagagctccattgctgtgttgtgtggcagcatcgggagcctgggggacacgccggagcaggtggcggtgcggaacatcaccgtgaagggcgcggcgctcgccgggacgacgaacgggctgcggatcaagacgtgggcgaaggcgaacgccggcgcggtcgccggcgtctccttctccggcgtcgtcatgcggaacgtcagcaacccgatcatcgtcgaccagaactactgccccggcaacgccagctgcccaaccgaggcacgcagccctgaaacctgtgacctcgtcgcgccatcgccatggatgccgacgtcgtaatggcttctctctctgctgtgtgttcaggggtcggggatcgagatcagcggcgtgtcgtacacggacatcgaggggacgtcggcgacggcgacggcggtgaggttcgactgcagcccgagccggccgtgcgccgggatcgccatgagggacgtccggctgaggtaccagccaccggcggcggcggcggaggaggagcagccggcggcgtcgttctgccggaacgcgcacggggtggcgtttggggacgtcgatccaccgagctgtctaaccgagtag</dnaseqindica> |
| External Link(s) |
