BGIOSGA000592

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Revision as of 10:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000592| Description = BGIOSGA000592| Definition = Oryza sativa Indica Group BGIOSGA000592, complete gene.| tag = | tid = BGIOSGA000592-TA|...")
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Gene Name

BGIOSGA000592

Description

BGIOSGA000592

Definition

Oryza sativa Indica Group BGIOSGA000592, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA000592-TA

Ensembl Protein ID

BGIOSGA000592-PA

Length

1479

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38301348..38302826

Sequence Coding Region

38301348..38302826

Genome Context

<gbrowseImage1> name=IndicaChromosome01:38301348..38302826 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:38301348..38302826 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGGAGGACGGTGAGGTCGAGATCAGCAGCTTCACCGTCACCGGCATCCTGTCGGTCTGTACCGCCACAGCGGATTTGGGGCACGGGGCTGCGGTTCATGGGCTAGTGGTGAAGTCCGCGTTTGAACAGGAGGTGTCTGTGTGCAATGCGTTGGTGGATCTTTACGGGAAGTGCCACAAGGTGGATGATGCAGCAATGGTGTTTGAGGGGATGGCGGACATAGTCAAGGATCTGTTCAGCTGGAACTCAATGCTGTCAGCGCTGCATTACTCCGCTGACCATGCTGGGACAATGAAGCTGTTTTCAAGGATGAGACGCGTTGCTGTGTGGCCAGATGCAGTGACCGTTGCGGCTGTTCTTCCTGCATGCGCGCAGACTGCAGCATTGCAGGTGGGAAGGGAAGTGCATGGGTACATTGTAACTAGTGGACTGGCTTGCCATGGCGCGTTGGACTCGTTTGCTTGTAATGCACTGGTGGACATGTATGCCAAGAGTGGGGCTTTGGATGAGGCTCGTCGCATATTTGATCGGATGCAACAGCGGGATGTGGCATCATGGAATATTATGATTGATGGATATGCATCGCACGGGCATGGGAAGGAAGCACTGGAGTTGTTCTGCCAGATGACAGAGGTGGAACGGCTTCTTCCAGATGAGATAACACTGTTGGGGGCATTGTCGGCTTGCAGCCATTCCGGGCTTGTTGAAGAAGGGAAGAATTTTCTGAAGAGAATGAAAGAGGAATTTTCTTTGGAGCCACAGTTAGAGCACTACGCATGTGTGACTGACATGCTTGGGCGTGCAGGGAGGCTGGAGGAGGCTAGAAAGGTAGTAGAGGATGCAGGGGATGTGGGGGTTGGTGCTTGGAGGACATACCTTGCAGCATGCCGGATGCATGGTGATAAGGAGAGAGCCCAAGAGGCAGCTAGGATGCTGATGACGACAGAGCAGTCTGAGAGTGGTGGGTGGGTGCTGCTAGCGAATACATATGGCTGGGAGGGAAACTTTGACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTGTATGAGATGCAGCTGTTCCTGACGTTCCGTAGTAGATCAGTATCCGTTTGGAATTTCCGTGGTGAATTAGTCACATCTTTTGAGGACCATATGTTGTGGCACCCTGATTGCAATACCAACAGTATTTACATCACCAGCAACCAAGATCTTATTATTTCTTACTGCAAGGCTGATCCAAATGATCCTTCTTCAGAAGAAAATGCTTGCTCCATAAATATCAGTGAGATCTTAACCGGAAAATGCTTGGCCAAAATAAAGGCAGGGAACCTTAACAAGCAAAGGGTGTCTAAGTTCCAAAGTACACCTTCCGAGGCACTGGGGGATATCACAGCTCTGTACTACGATGAAGAGCGTGAGGAGATATACACCGGCAACCGACTAGGCCTTGTCCATGTGTGGTCAAATTGA</cdnaseq>

Protein Sequence

<aaseq>MREDGEVEISSFTVTGILSVCTATADLGHGAAVHGLVVKSAFEQEVSVCNALVDLYGKCHKVDDAAMVFEGMADIVKDLFSWNSMLSALHYSADHAGTMKLFSRMRRVAVWPDAVTVAAVLPACAQTAALQVGREVHGYIVTSGLACHGALDSFACNALVDMYAKSGALDEARRIFDRMQQRDVASWNIMIDGYASHGHGKEALELFCQMTEVERLLPDEITLLGALSACSHSGLVEEGKNFLKRMKEEFSLEPQLEHYACVTDMLGRAGRLEEARKVVEDAGDVGVGAWRTYLAACRMHGDKERAQEAARMLMTTEQSESGGWVLLANTYGWEGNFDXXXXXXXXXXXXXXXXXXLYEMQLFLTFRSRSVSVWNFRGELVTSFEDHMLWHPDCNTNSIYITSNQDLIISYCKADPNDPSSEENACSINISEILTGKCLAKIKAGNLNKQRVSKFQSTPSEALGDITALYYDEEREEIYTGNRLGLVHVWSN</aaseq>

Gene Sequence

<dnaseqindica>1..1479#ATGAGGGAGGACGGTGAGGTCGAGATCAGCAGCTTCACCGTCACCGGCATCCTGTCGGTCTGTACCGCCACAGCGGATTTGGGGCACGGGGCTGCGGTTCATGGGCTAGTGGTGAAGTCCGCGTTTGAACAGGAGGTGTCTGTGTGCAATGCGTTGGTGGATCTTTACGGGAAGTGCCACAAGGTGGATGATGCAGCAATGGTGTTTGAGGGGATGGCGGACATAGTCAAGGATCTGTTCAGCTGGAACTCAATGCTGTCAGCGCTGCATTACTCCGCTGACCATGCTGGGACAATGAAGCTGTTTTCAAGGATGAGACGCGTTGCTGTGTGGCCAGATGCAGTGACCGTTGCGGCTGTTCTTCCTGCATGCGCGCAGACTGCAGCATTGCAGGTGGGAAGGGAAGTGCATGGGTACATTGTAACTAGTGGACTGGCTTGCCATGGCGCGTTGGACTCGTTTGCTTGTAATGCACTGGTGGACATGTATGCCAAGAGTGGGGCTTTGGATGAGGCTCGTCGCATATTTGATCGGATGCAACAGCGGGATGTGGCATCATGGAATATTATGATTGATGGATATGCATCGCACGGGCATGGGAAGGAAGCACTGGAGTTGTTCTGCCAGATGACAGAGGTGGAACGGCTTCTTCCAGATGAGATAACACTGTTGGGGGCATTGTCGGCTTGCAGCCATTCCGGGCTTGTTGAAGAAGGGAAGAATTTTCTGAAGAGAATGAAAGAGGAATTTTCTTTGGAGCCACAGTTAGAGCACTACGCATGTGTGACTGACATGCTTGGGCGTGCAGGGAGGCTGGAGGAGGCTAGAAAGGTAGTAGAGGATGCAGGGGATGTGGGGGTTGGTGCTTGGAGGACATACCTTGCAGCATGCCGGATGCATGGTGATAAGGAGAGAGCCCAAGAGGCAGCTAGGATGCTGATGACGACAGAGCAGTCTGAGAGTGGTGGGTGGGTGCTGCTAGCGAATACATATGGCTGGGAGGGAAACTTTGACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTGTATGAGATGCAGCTGTTCCTGACGTTCCGTAGTAGATCAGTATCCGTTTGGAATTTCCGTGGTGAATTAGTCACATCTTTTGAGGACCATATGTTGTGGCACCCTGATTGCAATACCAACAGTATTTACATCACCAGCAACCAAGATCTTATTATTTCTTACTGCAAGGCTGATCCAAATGATCCTTCTTCAGAAGAAAATGCTTGCTCCATAAATATCAGTGAGATCTTAACCGGAAAATGCTTGGCCAAAATAAAGGCAGGGAACCTTAACAAGCAAAGGGTGTCTAAGTTCCAAAGTACACCTTCCGAGGCACTGGGGGATATCACAGCTCTGTACTACGATGAAGAGCGTGAGGAGATATACACCGGCAACCGACTAGGCCTTGTCCATGTGTGGTCAAATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000592