BGIOSGA000593

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Revision as of 10:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000593| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000593, complete gene.| tag = P0454H1...")
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Gene Name

BGIOSGA000593

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000593, complete gene.

LocusTag

P0454H12.18

Ensembl Transcript ID

BGIOSGA000593-TA

Ensembl Protein ID

BGIOSGA000593-PA

Length

3529

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38273847..38277375

Sequence Coding Region

38277184..38277375,38276442..38276586,38276215..38276365,38276010..38276135,38275850..38275930
,38275057..38275249,38274682..38274952,38273847..38274052

Genome Context

<gbrowseImage1> name=IndicaChromosome01:38273847..38277375 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:38273847..38277375 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCGAGGCGGGTCTCCGCGAACCCTCGGCCGTCCTGCGTGCGGAGGGTGCTTGCGCGGAAGCGGCGGAGGCCCGAGGCGACGGCGAACAGCGCGCGGAAGCTGCAGCGGCGGGAGATCTCCGCGCTGCCGTGCCGCGCGTTCTCCGCGAGCACCACGCGGGAGCGGTTCCGCAACATCCAGCTCCAGGAAGAGTTTGATACTCATGATCCCAAGGAGATGGGTTCACTACTACCTTACTTGATGAAAAGGTCTGAGATTATTGAGATAGTTGGAGCCAGTGATATCATCTTTGCTTTATCACAGTCAGGAGTATGTGCTGCATTCAGCAGAGTCTCAAACCAGCGGATTTGCTTTCTGAATGGAAGACCAGATGAAGTCATTCGCAGTTTGTTTTACAACAAGAACAATGACTCACTCATTACTGTATCAGTTTATGGTTCTGAAAACTTCAGTGCCTTAAGATGCAGGACAACTCGAATAGAGTATATACGACGGGGGAAGCCAGATGCTGGTTTCCCTCTTTTCGAGACAGAGTCCTTGAAATGGCCAGGTTTTGTGGAATTTGATGATGTTAACGGGAAGGTGCTGACTTATTCTGCCCAAGACAGTACTTACAAGGTGTTTGACTTGAAAAACTACACTTTGTTGTATACAATATCTGATAAGAATGTTCAAGAAATAAAGATCAGCCCTGGCATAATGCTATTGATATACTCAAGAAAAAAGGGCTGTATTCCCCTTGACATTCTTTCTATTGAAGATGGTAAACGCTTGAAGTCATTCAAACACCTTCTTCATCGCAATAAAAAAGTTGATTTCATTGAGCAATTCAATGAAAAACTTCTGATCAAACAGGAAGGGGAGAACCTTCAAATTCTTGACGTAAGAAACTTCCAATCAATTGAAGTAAGCAGAAGTGAATTTGTGACTCCTTCTGCGTTTATCTTTCTGTATGAGATGCAGCTGTTCCTGACCTTCCGTAGTAGATCAGTATCTGTTTGGAATTTCCGTGGTGAATTAGTCACATCTTTTGAGGACCATATGTTGTGGCACCCTGATTGCAATACCAACAGTATTTACATCACCAGCAACCAAGATCTTATTATTTCTTACTGCAAGGCTGATCCAAATGATCCTTCTTCAGAAGAAAATGCTTGCTCCATAAATATCAGTGAGATCTTAACCGGAAAATGCTTGGCCAAAATAAAGGCAGGGAACCTTAACAAGCAAAGGGTGTCTAAGTTCCAAAGTACACCTTCCGAGGCACTGGGGGATATCACAGCTCTGTACTACGATGAAGAGCGTGAGGAGATATACACCGGCAACCGACTAGGCCTTGTCCATGTGTGGTCAAATTGA</cdnaseq>

Protein Sequence

<aaseq>MEARRVSANPRPSCVRRVLARKRRRPEATANSARKLQRREISALPCRAFSASTTRERFRNIQLQEEFDTHDPKEMGSLLPYLMKRSEIIEIVGASDIIFALSQSGVCAAFSRVSNQRICFLNGRPDEVIRSLFYNKNNDSLITVSVYGSENFSALRCRTTRIEYIRRGKPDAGFPLFETESLKWPGFVEFDDVNGKVLTYSAQDSTYKVFDLKNYTLLYTISDKNVQEIKISPGIMLLIYSRKKGCIPLDILSIEDGKRLKSFKHLLHRNKKVDFIEQFNEKLLIKQEGENLQILDVRNFQSIEVSRSEFVTPSAFIFLYEMQLFLTFRSRSVSVWNFRGELVTSFEDHMLWHPDCNTNSIYITSNQDLIISYCKADPNDPSSEENACSINISEILTGKCLAKIKAGNLNKQRVSKFQSTPSEALGDITALYYDEEREEIYTGNRLGLVHVWSN</aaseq>

Gene Sequence

<dnaseqindica>1..192#790..934#1011..1161#1241..1366#1446..1526#2127..2319#2424..2694#3324..3529#ATGGAGGCGAGGCGGGTCTCCGCGAACCCTCGGCCGTCCTGCGTGCGGAGGGTGCTTGCGCGGAAGCGGCGGAGGCCCGAGGCGACGGCGAACAGCGCGCGGAAGCTGCAGCGGCGGGAGATCTCCGCGCTGCCGTGCCGCGCGTTCTCCGCGAGCACCACGCGGGAGCGGTTCCGCAACATCCAGCTCCAGGTCAGCCGGCCCGCTCGGCGCGTCCCCCCTCCCCACACCCTGTCTCCCAGCATTTAGGTCTGGATCGATATGGCGTAGAGGGCAGGAGTGGGTCGGTAGGTTAGGGCTTGGAGAGAGGATAATTGTTTTTTAAAAAAATGATTATTTGAATGAATCAATTGCGGGAAGAGTTGGAGCCCGAGAGCATATAGGTAGTGTGGGTGTTGTGAGGAGGAACTTTCGCCTACGGTCAAAGAATTCACGAGGCGTAAATATTCCCCAATGATGGTGATAGCTTTGGCTGTTTGCGGAGAGTTTCTCCATCGGATATCGGAATCCCTGGATTAGTACAGCTGTTTTAGCATTATGGACGATGATAGGAAGAGGGGAAAGGTGTGTTTGGTGCTATATTTTGAGATGTGGTCGCTCTCTTTGGTATTTACTGTGATAAAAGTATACTCTGGAGCATAACTCGGTTGGAAAAGGTTGAAACTTCAGTGCCCTTCATATCATAGAACAGCCGATCTTCACCAAAATTTTGTTTCTAACTTTTAGTTAGCATGACCTGTTCTTTTTACGATTATAACACATCTTCAAATTCTTTTCACTTACAATTAGGAAGAGTTTGATACTCATGATCCCAAGGAGATGGGTTCACTACTACCTTACTTGATGAAAAGGTCTGAGATTATTGAGATAGTTGGAGCCAGTGATATCATCTTTGCTTTATCACAGTCAGGAGTATGTGCTGCATTCAGCAGAGGTACAACTTTCGATAATGATTGGTCATGTACTGATGTTATAAATTACCATTGAATTCTGAGATGTATTTGTTTTAGTCTCAAACCAGCGGATTTGCTTTCTGAATGGAAGACCAGATGAAGTCATTCGCAGTTTGTTTTACAACAAGAACAATGACTCACTCATTACTGTATCAGTTTATGGTTCTGAAAACTTCAGTGCCTTAAGATGCAGGACAACTCGAATAGAGTAAGCTTGTCTTCCTGTGATTCTGCTACGGTAGTGTTATATTGTTTATATGAATCTTTTTATTATTTTGTCTTTTAAGGTATATACGACGGGGGAAGCCAGATGCTGGTTTCCCTCTTTTCGAGACAGAGTCCTTGAAATGGCCAGGTTTTGTGGAATTTGATGATGTTAACGGGAAGGTGCTGACTTATTCTGCCCAAGACAGGTATTCTAGCTCTAATTTCTTTGAAGGCGAGAAGATTAACCTCATTCGAATTGTGACATTCCTTTCTCATTCCAACCAGTACTTACAAGGTGTTTGACTTGAAAAACTACACTTTGTTGTATACAATATCTGATAAGAATGTTCAAGAAATAAAGATCAGGTAAGGGAATCTTTCTTGCTTGCTGATCATGATTAAGTTTCACATTTGTACAACCTAAATTATGCTTTGCCTTTTTATTCATTGGAAGAGATTTTTTTAAAAAAATTGATTTGAAGTGCTATGCCCCCAAAACTTCGAATATATTTGGTCAATGGTTAGGAGAGCTGCATGTTTTCTATACACCTTGCCTGTGTTTGATGGGAAACTAATGGTGAGCAGCTCATAGGCTTTTCTTCAATGCACTTTGTGAAATGCTTCCCTATAGGTGAACAGAAGTTCTGCTAAAATGCAAAAGCTGAATAGCATACTTTCAAAACAAACCTTTCGGCCTGATTGGCAACTGTTGATTACTAAACCGACAACTTTACTGATTGAACATTTATGTAATTTAGCTTTGTGGAGAGCATAGAAATACTATTGCCAATTGAGCTATCATGGGTTTATTCTTGGTGACCTCCTATATATGGTAAATTGATTGCTTTTTGTCAAGTGAGATGTGGCTGGATTGATTGAAATTTTTGTATGTGTAACTTATGGAGGTCATTTCCATTTTCGAGCTTCCAAATTTATACCTTTTTGCTTATTGCTACCTTCCAACAGCCCTGGCATAATGCTATTGATATACTCAAGAAAAAAGGGCTGTATTCCCCTTGACATTCTTTCTATTGAAGATGGTAAACGCTTGAAGTCATTCAAACACCTTCTTCATCGCAATAAAAAAGTTGATTTCATTGAGCAATTCAATGAAAAACTTCTGATCAAACAGGAAGGGGAGAACCTTCAAATTCTTGACGTAAGTTTTTTTCTTGGTATAGATTATGGATAACAGCAAATGAAACAACACAGTTTCCTCTCTTTATTTGTAGAATTGTAGTTAATTTTTGTGCAATGCTGCAGGTAAGAAACTTCCAATCAATTGAAGTAAGCAGAAGTGAATTTGTGACTCCTTCTGCGTTTATCTTTCTGTATGAGATGCAGCTGTTCCTGACCTTCCGTAGTAGATCAGTATCTGTTTGGAATTTCCGTGGTGAATTAGTCACATCTTTTGAGGACCATATGTTGTGGCACCCTGATTGCAATACCAACAGTATTTACATCACCAGCAACCAAGATCTTATTATTTCTTACTGCAAGGCTGATCCAAATGATCCTTCTTCAGAAGAAAATGGTAATAATCAAACTTGTGTTGCCCGTGTGTTTATTTATTAGTGACGTGATGATAGATCTACTGCCTCTTATATTTGGCTGGTTTTTGGTTGTTGCCATTTCTTGTTATTGCATTCCTCTTTGTCATTCTGATATACTCCCTCCATACTCATAAAGGAAGTCGTTTAGGACAGCGACACGGTCTCCAAAACACAACTTTGACTTCTTGTTTCTATAAAAATATTTTTTGAAAAGTGATATATGTATACTTTTATGAAAGTATTTTTCAAGACAAATCTATTCATATAATTTTTACATTTTCAAACTCAACAACTTGAAAGTTATTTATGATTTATATTCCCAAGGTTTGACTTAAACATTGTCCTAAACGACTTCCTTTATGAGTACGGAGTGAGTATATCAGCTTTGAATATCAATAAAATATAAGAGGCCTCAAAAGGTTGACATACTGATGCACTTATTATATACTGTATCGTTTTAATTATTTTTTATGCTCGTAAAATGTATGCTTTTCAGACTTGCTGCAGTTGATAAGAAATTTGTCCTTTTCAGACCTACTGCAGTAGGTAATTGAGGCTGATGCATCTATTGTCCCCACATAACATGATCTTCACTTTGGTTCTTTTGCAGCTTGCTCCATAAATATCAGTGAGATCTTAACCGGAAAATGCTTGGCCAAAATAAAGGCAGGGAACCTTAACAAGCAAAGGGTGTCTAAGTTCCAAAGTACACCTTCCGAGGCACTGGGGGATATCACAGCTCTGTACTACGATGAAGAGCGTGAGGAGATATACACCGGCAACCGACTAGGCCTTGTCCATGTGTGGTCAAATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000593

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA000593&oldid=38317"