BGIOSGA000596

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Revision as of 10:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000596| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000596, complete gene.| tag = OsI_042...")
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Gene Name

BGIOSGA000596

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000596, complete gene.

LocusTag

OsI_04205

Ensembl Transcript ID

BGIOSGA000596-TA

Ensembl Protein ID

BGIOSGA000596-PA

Length

4007

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38202636..38206642

Sequence Coding Region

38206480..38206642,38206246..38206354,38206020..38206143,38205084..38205163,38204827..38205004
,38204683..38204747,38204467..38204575,38204269..38204379,38202636..38202974

Genome Context

<gbrowseImage1> name=IndicaChromosome01:38202636..38206642 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:38202636..38206642 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCGGAGGACGAGAGGCTCCTCATGGAGGCGAAGTGGCTGCCGTGGGACGAGCGGCTCCGGCACAAGAGCTGGAAGGTGCGGCGCGACGCCAACGTCGACCTCGCCGCCCTCTGCGACTCCATCGCCGACCCCAAGGACGCCCGCCTCCGCGAGTTCGGGCCGTTGTTTCAGAATTCCGTGGCGGATTGCAACGTGTCGGTGCGGGAGAAGGCGCTGGATGCCGTGCTCGCTTTCCAGCGGGCGTCCGATGCTGCTGATGCGTCCAGGTATGCGAAGGGGATCTGTGATGCGATTGTCGCAAAGTGCCTCACCGGCCGTCCTAGGATCGTCGAGAAGGCTCAGGCTGCGCTCCTCCTCTGGGTGGGGTTGGACGCGGCGGAGGTTTTCGTTGAATCAATGGAGAAGGCTGTAAAGAACAAAATGGCTAAAGCAGTTGTGCCTGCTATCGATGTAATGTTTCAAGCACTTAGTAAATTCGGACCTAAGGTAGTACCACCAAAAAAAGTATTGAAGATGCTTCCCCAGCTGCTTGATCATCCAGATCGGAATGTTCGGGCTTCTTCCAAGGGTTTGACAGTTGAGCTTTGTTGGTGGATTGGCAAAGAGCCTGTAAAGGCAATTTTATTTGAGAAGATTAGGGATATGATGATAAAAGAGTTGGAAGCAGAGCTAGCAAATAACTCAGCAATTGCTAAGCCAGCTCACAAGATAAGGTTCATACGGTGTTATGATTGTACATGGACGTTGATCGATGAGTATGATCTTGTTGATCCTGTACATACCTTAACACCACCTGAGGAGTCTGGATTCTGTGATGGTGTGAAAGCAACTAAGTGGTCCGAAAGGAGGGATGCTACGGAGCTAACCAAGCTTTCTTCAACAAAAAGAATTGCTACTGGTGATTTTGAAGACATCTGTCCAACACCCAAGAAGAACGATGGCTGTGACTTCTCGAAGTGGTATGAGCCGAAGACTACCCCAACACCTTATTTGAAGCAGGACCTGTTGAATGATTTGTACGCTGTTGTACATGGTTTGAAGGAGGACAACACTGAGATTAAAGCATCTCTTATCAGTGCAAGGGCACAGATTGATGAGCTCATGACTGCGCATAATGCAGTGACTGATAGGAGAAGAAAACTCAAGGAGAAAGATTGCTCGGCTTGTAAACTTAGTGCTAGAGTTGTTGAATTAGAAGAGGAAATACAATTTCTGTTATCAATTATTGTCGGATTCGTAGTGCTAATAGTTGCATTGTGTCTTGGTGGATAG</cdnaseq>

Protein Sequence

<aaseq>MSAEDERLLMEAKWLPWDERLRHKSWKVRRDANVDLAALCDSIADPKDARLREFGPLFQNSVADCNVSVREKALDAVLAFQRASDAADASRYAKGICDAIVAKCLTGRPRIVEKAQAALLLWVGLDAAEVFVESMEKAVKNKMAKAVVPAIDVMFQALSKFGPKVVPPKKVLKMLPQLLDHPDRNVRASSKGLTVELCWWIGKEPVKAILFEKIRDMMIKELEAELANNSAIAKPAHKIRFIRCYDCTWTLIDEYDLVDPVHTLTPPEESGFCDGVKATKWSERRDATELTKLSSTKRIATGDFEDICPTPKKNDGCDFSKWYEPKTTPTPYLKQDLLNDLYAVVHGLKEDNTEIKASLISARAQIDELMTAHNAVTDRRRKLKEKDCSACKLSARVVELEEEIQFLLSIIVGFVVLIVALCLGG</aaseq>

Gene Sequence

<dnaseqindica>1..163#289..397#500..623#1480..1559#1639..1816#1896..1960#2068..2176#2264..2374#3669..4007#ATGTCGGCGGAGGACGAGAGGCTCCTCATGGAGGCGAAGTGGCTGCCGTGGGACGAGCGGCTCCGGCACAAGAGCTGGAAGGTGCGGCGCGACGCCAACGTCGACCTCGCCGCCCTCTGCGACTCCATCGCCGACCCCAAGGACGCCCGCCTCCGCGAGTTCGGTCAGTTTAGTTACACTCTCCCAGCGTCTCCCGAATCTTGCGCGATCGGATCCGCGTCGTCTGAACTCTGAAATGCATTCTAATTTGCCTTTTCTTTTCTTTTTTTTTTTTGCGCCGGTGGTTAGGGCCGTTGTTTCAGAATTCCGTGGCGGATTGCAACGTGTCGGTGCGGGAGAAGGCGCTGGATGCCGTGCTCGCTTTCCAGCGGGCGTCCGATGCTGCTGATGCGTCCAGGTTGAGTGCGTGTTGGTCATGGCGTACGCTGCCGTGTCATTCGATCTCTGCTCGGTTCTACTACTTCTGAGTTGATGTGTGGGATTTGTTGGTTAATTTCAGGTATGCGAAGGGGATCTGTGATGCGATTGTCGCAAAGTGCCTCACCGGCCGTCCTAGGATCGTCGAGAAGGCTCAGGCTGCGCTCCTCCTCTGGGTGGGGTTGGACGCGGCGGAGGTTTTCGTTGTAAGTTCAACTAGAATGGATGATTATGGAGCATGATTATGATGAATCACCTGCATTAATTTAGCTCATAGGGATGGTGTGTGCCTGTGTGGTGCCACTCACTTGGTCTCCTACAATTTATACTGTAGATTCTAAGGTGTATTGTTCTATTTAGTTGCAGGCTTGCTTAGTGCTAATCGATTGTTATTCAATATCTAAAGTAATCAAAAGCTCCTCTCAACAGAGTTTTTCATTTAACTTACACCACATGCATTATAGCGACCGTCATGGTACTTTGGACGTATACTGGATCAAGTCGCACTATCATTTGGATGAAAATGATATATTGATAGAGAAATTTTACGATTTTTGATAAAGTACATGTTGGACATATACTGGATCAAATTGGACGTATAAATGTATAATGGATCTGCATTTTGTGCAATCGCATAATCCTAACGGCAATGCGATGTATAGATTTTAAGAGAGAAACTACCTTAAGCCATTGCTTTTAATTAGTATGTAGTACATTTCTAAACTATATTGAACTCATTGATGCATAAGCTTCATTTGGTATAATCTGTCATCATTTATTTGCCGATGCCTACTTACTCTTCTATATTTTGATTACGTCTTATTCCTTTCAATACTTTGATTTAATCATATTATTTGTAAGAGAAGGACTAATTTTGTTGTTATGATCATATCCTGATGCGAGGCAACAAGCCTGTGCCTTAGACCATCTTCTCTTTAAATTGCTTACTCAACCGATCTAAAGATTTTTCATCTCTTTGTATTACCACATTTTGCCTCTTGTAGTTATCGTTTAAATCTTTCTACATTATGCTTAAACGCACTTCATATTTTGCGCTATCAGGAATCAATGGAGAAGGCTGTAAAGAACAAAATGGCTAAAGCAGTTGTGCCTGCTATCGATGTAATGTTTCAAGCACTTAGGTAAGTTCCTACTTCCTAACTGTATTTCTGCCATCCTGTTATTTGTCTGTACCTTCATTAACATAATTTCTCCTACTAGTAAATTCGGACCTAAGGTAGTACCACCAAAAAAAGTATTGAAGATGCTTCCCCAGCTGCTTGATCATCCAGATCGGAATGTTCGGGCTTCTTCCAAGGGTTTGACAGTTGAGCTTTGTTGGTGGATTGGCAAAGAGCCTGTAAAGGCAATTTTATTTGAGAAGATTAGGGATATGATGGTAGGATATTTCATACCAGACCATTACTGATCATATATACCATGCGTGATAGTACAAGCACACTTCGTTCTGTTTGTAGATAAAAGAGTTGGAAGCAGAGCTAGCAAATAACTCAGCAATTGCTAAGCCAGCTCACAAGATAAGGTGATGCCCTTTTTTCTTTTTAAATTATGAGTTTCTGAATCTGTTTCTTTTTTGTTCTATCGTAAAATTTGTGATCTAATCTTTCCAGATAAACATGTGAATTATAGGTTCATACGGTGTTATGATTGTACATGGACGTTGATCGATGAGTATGATCTTGTTGATCCTGTACATACCTTAACACCACCTGAGGAGTCTGGATTCTGTGATGGTGTGGTATGTGCATCGGAACATTGTTCGTCACACTACTATAGTTAAATATCTTACTCTTTTTGTTGATATTGTTTTGTTTTTTGATACCAGAAAGCAACTAAGTGGTCCGAAAGGAGGGATGCTACGGAGCTAACCAAGCTTTCTTCAACAAAAAGAATTGCTACTGGTGATTTTGAAGACATCTGTCCAACACCCAAGAAGGTTAATCCTGGCTCGAAGTCTCTGTGCATTATGTACATTCAAATTTGCAGCCCTGTTGAGTTCATCCAAGTTTTCTTAAGTGTTAGTAAAAATCAACGTTGTTTCTGAATCATGATTCGCTTGTATCTCTCTTTTTTATACCGATGCCAATGTGGTTGCTTCAGAAGAAGCTACTGAAACAATAGGGAATGTAGCTAGCGGATTAAGAACTCAAACAATAGGGAATGCTTCCTGTTTTACTTGTAAGCATTATATAAATTTCAGTAACCATAAATTACCATTGAATTATTTGATTGCCTCACTGATAACCAACTTATTCATCTTTGTTTCTGAATTTTAGTTATAAGGTAACATGAAATTGTATCAATTTAAAAGTACAATTTAACCATTTAAATTATATAACTGGACCTCTAGCCAAACACGTTCGTTCCTTTGTGCTTATTATTGAGGAAGGGAGGAGCAACTTGCTCGTTTACCATTAACACACTTTCTAAATTGTTAAGTGTTCTTTTAAAAAATATATATACAAGTTTATGAAAAACTCCAAAAAAAATCTATTTTCAAGTTTGAAATAGCTAATACTTAATTAAGCATGAACTAATAACCTTCCTCGTTTTGTGTACGGCTTATAGTCACTTCAAATTCTGTTTCGAATAGAAGCCTAAGTTGTTTCTTACCCTTCTTATTGCTTAGAAGAATTTTATGATGTACCATCTCCACTTTTAAGTATATGATATTGTTGACTGTTGGATATGGTATTTGGCCATTTGATCTAATTTAAAATCTTAGCAAAAATATTAAAAATAATCATCCTTAATGAACCTGTTAAAACAAGTCAACAAAATTAAAATGCCTATATAGTTTTTATTAGACAAATGGTTAAACAGCATGACGAAAAGTCAACAGAATCATATTTACAAATGGAGATAATACTAACTCTAAAGGGAAAAGTCATTTTTTTATTGAAAGGGTAAGACCAATTTTATCCCATGAACGAGTGTTTGTCTTAGATACACCCCAAACTACAAAACCAAGTATAATACCCCCTCCCCCTAGAAAAAAATAAATATTGGACACTTCACCCATCTCGAGCTGCTTTACATTGAGTGTTGTACACATGAACGCAACGTAGGATGTCACATGTACTAGTGGTCCACGTCAGCCCTTGTACCATGTAAGATGACTTAAACTAATACCATGTGGGCCATGTCAGCTCCAGTGAGTTCGTCAAATAGTAGTGTAATGGATTTGTTGTTTATATGGAAATAATATTGTGTGATTTTGAGTATTGTAGAACGATGGCTGTGACTTCTCGAAGTGGTATGAGCCGAAGACTACCCCAACACCTTATTTGAAGCAGGACCTGTTGAATGATTTGTACGCTGTTGTACATGGTTTGAAGGAGGACAACACTGAGATTAAAGCATCTCTTATCAGTGCAAGGGCACAGATTGATGAGCTCATGACTGCGCATAATGCAGTGACTGATAGGAGAAGAAAACTCAAGGAGAAAGATTGCTCGGCTTGTAAACTTAGTGCTAGAGTTGTTGAATTAGAAGAGGAAATACAATTTCTGTTATCAATTATTGTCGGATTCGTAGTGCTAATAGTTGCATTGTGTCTTGGTGGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000596