BGIOSGA000605

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Revision as of 10:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000605| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000605, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA000605

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000605, complete gene.

LocusTag

OSJNBA0085D07.27

Ensembl Transcript ID

BGIOSGA000605-TA

Ensembl Protein ID

BGIOSGA000605-PA

Length

6103

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38106886..38112988

Sequence Coding Region

38112729..38112988,38112478..38112651,38111120..38111282,38110912..38111036,38110272..38110360
,38108895..38108945,38108009..38108448,38106886..38107605

Genome Context

<gbrowseImage1> name=IndicaChromosome01:38106886..38112988 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:38106886..38112988 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGCGTCGGATCTCCCCGACGAGCTGTGGGCGCGCGTGCTGGAGCTCGGCGCGGGCGCGGCCTCCTCCGCGCTGGGGTTCCGCGACCTCTGCGCCCTCGCCATCGCCTCCCGCCGCCTCCGCCGCCTCTCCCTCCACCCCTCCCTCTGGTCCGCGCTCCTCTCCCGCGACTTCCCCACCCAATCGTCGCAGCCCTCCTCCGCCTCCTCCTCTTCCTCTCAGCAGCAGCTCCACCCCAAATCCGTCTACAAAACTAAGTTCGAGAGGCATAAGGTGCGGATGGCGGAGGCGAGGCGGCGGGTGGTGTTCGAGGCAGAGGGCCGCGTGTTGGCGTGCCGGAGGCGGCTGACGCAGCTGGAAGAGTCGTTGCAGGAGGAAGGGGAGAAGATGAAGGCCGCCGCGCAGGAGCTGGACAACCTCGAGAGGGTCAGGAGAGCTTCAGTGGCATTAAATGTATGGCAACCACAAGTTGTTCGTGGACGTCAAAAACAATTGGTTCAACAGTGCACAGTTCCAGTTGATTCCCGTCTTAGTGATGTAAACATGGAGCTGAAAGTTTGTAAGCAACAAATAGCAACTTATAAGAACATTTATAACAAGGAGAAGGAAAAACTGAATGAGTATGAGGAAGCATTGAAGAGAGCAATATATCATCCATTGCAGAGTAGCCATACAAGTTCAATTGCCAATGAGCCACAAGCAAAGAGAAAGAAACGAAACTGTGGGCGGTCAGCTGTTCTAGAGCAGCAGGACGACATACATCTGATCAAATTGCTTCCGCTGACCTTTGGGTTGAAGAGATATGCACAAGCAGTCGGCCTTGTTGGAGGTGGTGATTGCTGGTTCTTCGAGGAAAGAGAAAATCCTCTCCTGAATTTGGAATTAAGCTTGTGGATGGGCGGATCTTTGGTGGACTCTAGCGCCGAAGGTGTTAGCAGCAGCTTATGTCTCTGCCACAGCACCTCTGAAAAGGCAGGCTTTGAGCATAGCTCATGTGCTAGCTCTGGAGATGGAAATTGTGAAGCTGGAATAGATTTTGGGCAAGATGATTTGGTTGTCAATGAAATTGGAATGGCTATTGCTGAAGTGATGCATGTCTGCAGTGATCATGATGATGATGAAGGGACAGATTCGGGTGAAGACTTTGATGAAAATGAGGGTCTACTTTCTCTGGAATCAGATTCCACTGATGATGTAGTGGATATTGATAATGAATTGGTCATATCGCCTACCTTTTCTAGTTGCAATGCATCTGAATCATCAATCAACAAATCAGACTCTGGAAATTCTTCCATTAATGGCACTCCACCGTTGGTTTCTGCAATGAAAGGAAGCCGTGCAAAGTTGGGAATCGTCACAAGTTTGAGTGTTTCATGGGCCCCTGATGTATATGATCCTCCTGTTACTTCTGGGTCTCACACTGTGAAGGGGCATCAAAGAAGTTCAAGGAAGAGCCACTACAAATACAAGCCGGCCAAGAGCAGTAGCAGCCGCAGCAGCAGTGGAAGCAAAAAGGACAGGAAGCATTCTCGCCACAGTAGCAGCAGCAGCAGCAGCAGTAACCACAAAAGAGACAGGAAACCTTCCTACCGCAACACCGTTGGTGGTGTAAGCGTCGGCAGCAGCAGCAGCAGCAGAAATACTGATGCTAGTGCTGCTCAATATCGTGATCTGTACAGCAGCAGTGGCGGCAACAGAATCGACATTGCTGTTCCTCAATACAGCAAGCTATCTCCGTTGGTGCCGTCTGAGAGTGCAACATATCGTAATGTGTACAACAGCACTAGCGGCAGCAGAACTGACCCTACCGTTCCTCATTGTAGCAAGCTATCTCCGCTGGTGACATCTGAGAGTGCATCACTTGCAGGGACCGTTCCTGTGCTGAAGACATTGGAGCCGATCAAACGCAGCTCCAGCTGCTGCAAGGAGCAGCCTTTGAGCTTTCTGTCACGCCAGTTTGTGGCTGCAAAGTACAAGGGGATGTTCTCACTATGGAGTCACAACCAGCTAGCTTCTTAA</cdnaseq>

Protein Sequence

<aaseq>MSASDLPDELWARVLELGAGAASSALGFRDLCALAIASRRLRRLSLHPSLWSALLSRDFPTQSSQPSSASSSSSQQQLHPKSVYKTKFERHKVRMAEARRRVVFEAEGRVLACRRRLTQLEESLQEEGEKMKAAAQELDNLERVRRASVALNVWQPQVVRGRQKQLVQQCTVPVDSRLSDVNMELKVCKQQIATYKNIYNKEKEKLNEYEEALKRAIYHPLQSSHTSSIANEPQAKRKKRNCGRSAVLEQQDDIHLIKLLPLTFGLKRYAQAVGLVGGGDCWFFEERENPLLNLELSLWMGGSLVDSSAEGVSSSLCLCHSTSEKAGFEHSSCASSGDGNCEAGIDFGQDDLVVNEIGMAIAEVMHVCSDHDDDEGTDSGEDFDENEGLLSLESDSTDDVVDIDNELVISPTFSSCNASESSINKSDSGNSSINGTPPLVSAMKGSRAKLGIVTSLSVSWAPDVYDPPVTSGSHTVKGHQRSSRKSHYKYKPAKSSSSRSSSGSKKDRKHSRHSSSSSSSSNHKRDRKPSYRNTVGGVSVGSSSSSRNTDASAAQYRDLYSSSGGNRIDIAVPQYSKLSPLVPSESATYRNVYNSTSGSRTDPTVPHCSKLSPLVTSESASLAGTVPVLKTLEPIKRSSSCCKEQPLSFLSRQFVAAKYKGMFSLWSHNQLAS</aaseq>

Gene Sequence

<dnaseqindica>1..260#338..511#1707..1869#1953..2077#2629..2717#4044..4094#4541..4980#5384..6103#ATGTCGGCGTCGGATCTCCCCGACGAGCTGTGGGCGCGCGTGCTGGAGCTCGGCGCGGGCGCGGCCTCCTCCGCGCTGGGGTTCCGCGACCTCTGCGCCCTCGCCATCGCCTCCCGCCGCCTCCGCCGCCTCTCCCTCCACCCCTCCCTCTGGTCCGCGCTCCTCTCCCGCGACTTCCCCACCCAATCGTCGCAGCCCTCCTCCGCCTCCTCCTCTTCCTCTCAGCAGCAGCTCCACCCCAAATCCGTCTACAAAACTAAGTAAGAGCTCCCTCCCTGTCCCGATTAGCTTTCTTCTCGTGCGTGTGGGGGCCGGGGTGACCGGAGTTCTTCTGCAGGTTCGAGAGGCATAAGGTGCGGATGGCGGAGGCGAGGCGGCGGGTGGTGTTCGAGGCAGAGGGCCGCGTGTTGGCGTGCCGGAGGCGGCTGACGCAGCTGGAAGAGTCGTTGCAGGAGGAAGGGGAGAAGATGAAGGCCGCCGCGCAGGAGCTGGACAACCTCGAGAGGGTCAGGTATGTTTTTTTTGTCCAAAACCCTATCTTCTCGTGTGCCTTATTTGCTTGATGCTAGAGTACAACTTAGAGAAAGTAGAATATGTAATACACTATCCTAAAAAAACATATTTCTGTGCATTTGCGTAGTTCGTAGTTTGGTTCTATGTGAGCACATAAGAAGATCTATTTCTCTGTTTTATTTAGATAATGGAATTCATTCTGGCCTTTGCTTCAAACAAGATGTATTGCTTTTGCAGCTTGTCCATTAATCTGTTGATTTTCTTGTTTATGCAAGAGCTGGTCTGAGACCTCTACGGTAAAAAAAAAAGCAGCCCGTGTTGTGTTTCTAAACGGTAGTAGGTGAACCCTGTTTAGTTCATATGAATTAGTTGTTGCGGTTGGTCATATTAATCCAGTTCAGAGGCATTTCTGTCTGATTATAAATTCAAATCACTTGCACTGTCACATTCCAGAACATAGTAACTCACACACAAAACAACATGGCTCCAATCTAGAGTCATCCAGGGAATATTTCTTTGTGCTTCAACATGGCTGAAGCATAGCTGCTATAGTTAACTTGGGAATATTCTTGGTGTTTCAACATGCTGAAGCATAACTGCTATAGTTATTAGGAGTGTTTCTTTGAGCTTCAACATGGCTGAAGCATAACTGCCAACTGAAAGGAACCGCCCCGAAGTTTTATAGGAGTACAGGATAGCCACCAATTGCGATGAATGATAAGAAGTGTGTTCAAACTTGAATGGTTATTATGTTAGATAAATTGAGTTACAGGCGCCAAGTGGCTTTTGAGCAACTGATCACAATCTCACCTGTAAAAGAACCACCTTTTCTTGTACTTTGCCTCCAATGGAAAGATGGAGTAAAACAATCCAGTTGGGCCAATGGGACAAATGACTACCTTTGCATGGAATCCCTCCATCCCTGTGGATGGTACACCAGTAACCTGTACACACCTTGCCTGATTAGAGAATTTTAGCATTTCTTCTATTCCAGTCTCCAGAATCCAGATTACCCACAGGATACTTGCATAACATGAATGACTACATACTTTTTTTTCTTCATTAGTCTATCAACTGGTTTGTTATATTACAGTATCATCTTTTTCCAAGCTCTACAGCCATTCCTTGATTATGTGCTATCATGGGTTCTCGCTACTATATTCTCAATTCATTGTCATTTGAGTTGTCTACAGGAGAGCTTCAGTGGCATTAAATGTATGGCAACCACAAGTTGTTCGTGGACGTCAAAAACAATTGGTTCAACAGTGCACAGTTCCAGTTGATTCCCGTCTTAGTGATGTAAACATGGAGCTGAAAGTTTGTAAGCAACAAATAGCAACTTATAAGAACATTTATGTATGTGATCTTGGACTTGACTGCAATTGTAATGATTGACAATGCTAGCCTTACTGGAATTGTGTTTTTGTTGCTATTATCAGAACAAGGAGAAGGAAAAACTGAATGAGTATGAGGAAGCATTGAAGAGAGCAATATATCATCCATTGCAGAGTAGCCATACAAGTTCAATTGCCAATGAGCCACAAGCAAAGAGAAAGAAACGAAAGTAAGACATGCAAGTTTGCCTGTGCAACCTTTCGTCCGATCTTCCTTTGTTTGCAGGTATCTACTAAGAGGCCCAATCTTGTTAAAACGGAGCAGTAATGTTTTTGCCTGAATTGCTCTCTTGTTTTGTTATTTACATGCATATATACTTATTGTTCTATTATTGCCATCATTGGAGTGGATAACAGTTCATAAGGAAGCATATGCCACCTTTTCTGAAAGTTCAGTTTTGTGCTTACATGATGCGATTCCACCGTTCCAGATTCGCACAACAAAGGCAAAGTTCTCCTGATGTTTTTGTTTCTACGTGCAGGTATGCATGCCACTGATATAACCATGGCAAATGCAAAAAGACTGAAGAGAGAGGAAAAAAGGTCCTCTATTGGCCTCTTCCTTGCCAGGCAAGTTGATAGGAAGCTCCATTGATCTTTCCCAAATGCTGAAAGAATCTATTCTCATGGTGGTGTGTGTACCGTCCAGCCGCCAGCGGCCAGCTGTTTATACCATAGCTGAATAGTCAGTGCTGCTGGTGCCTATCTGTCATTCACGAAGCTGTGGGCGGTCAGCTGTTCTAGAGCAGCAGGACGACATACATCTGATCAAATTGCTTCCGCTGACCTTTGGGTTGAAGAGATATGCACGTGAAGCAAACCATGTTCCCTTTTTTTTTACCTTCAGTTTCAAAATGTTAGTATGCAATTAATTAAGTACGTGGAAGCTTGTTTTCTGTAAGCTACTTCGTATACAAGTCAATCAACTCTTCCGAATTGTACCCTCCAGCAAGGTTCTGCCTGTAGAAATGGAAGGTCGTGATTGTTTTGTACACATAAAACATAATTTGCATTGCAAACTGAAATCTTAAAAGCAATGAAATCTTTAAAGCTGATAAGCTCCGTTTATCTCCCCATCATCAGATAACAACATCAAGTCTACTTTGCACACACGCCAGAGACATTGAATTTCATGCTCATCAGCTCATGCGTCTGACGTGGTGAGCTTAGTGAGGAAAAAAAAACAGGAGACGATGGGAAGCAAAAGCACCCCTGTCCGATCCTATATTTGTTGCAGTTCATTCATTTCATCACCAGTTTTCCCTGGACCAAAAATCCATCCTCCAAAAAACTCACCGCGGCCGACGTGGCGCCGAGCGCCTTCCGCCTTCCGCGCCGCACCCTCCTGCTGCGCCTTTGACCCGGCCATCCGTTCTCTCTAGCCCCACTGCGAGGTGGCCCCACCTGTCATCGAGGCAGCCTATTAATACACACCTCCCCTCCCCCGCGTCCGAGTCCCAGTCGCATATCCCGCCGCGTACTGGGACCAAGGGGAACGTGGGCCCCACCTGTCAGGTGGGCCGTATATAACGACCGCCTCCTCACCCCGGCCTCTCGCCACCCCAGAAGCCAATCCGCGCGAGGCCTCGCCGTGATCTCAATTCTCCCCCAAATTCGCAAATCCTCCGCGTTTCGTCGTCGCCGTTGCCGTCGCCGCCGAGCAGGGCGGATTCAAGGGGAAGCTCCGGTGAGATCCATCCGCGAAGCGCGTTCCCTCGCGGAACCCTCGCTCGCCGGGCCGGCCGATCTGGTTTGTGCGGGGGTGGTTGTGGTTGTGGTTGTTGTTTGGTCGCCGGAATCCGACGAGTTGGAGATCTCCGAGGGATAGGAATCCGTAGCGTTGCGGGCGCCAGGCGAGGTTACGATGCCTGCGGTGCTCGCCGCGTTCGCCAGCCTCCGCGCGGCCGCCGCCATCGCCTCCGCGGACTCCTCCCCCTGCTCCCATCTCCTGAAGCCCCCCTCCTCCCCGTGTTTTAGTAGTAGTAGTAATATTTTTAGTAGTAGTAATTATCTTTAACGATTGCCTCCCCATCGTCGCGCGCTCACGCCCCTCGGTCCTCACTTCGCACCGTTCGCGTTCTCGTGTTCGATTTGGTTGTGCTCGATCCGATCTCTCCCTTTCCTGCTTCCGATCAGAAGCAGTCGGCCTTGTTGGAGGTGGTGATTGCTGGTTCTTCGAGGAAAGAGGTATTAAAACGATCCCAATTTATTGCCATTCGCTGTTATTGATGTTATGGTGTTTATTTCATTGAAATGTGCTTCTATTTCAAATTTTGATCATTAGAATATAGATTTATGTTCTCACTATTTATTGCCTTGTAATTCACAGCATGCCAATATTATAGGGCATATTCTTATATTTACCCTTGTTTTTGATGGGCAAATAAATCTTGTGCTTGATTTTTTGTAGAGATAGAACAGGATAGACATTTAAGCAGTTAAATGCCCTGTTTGTCTATACCTGTTTCCTCAAATTAAATGAACTTGCTATTTAAGTCAAATATACGTTTGCAGTCATGAAAATGGTCTTATAAAGCTGTGTTAACTAAATTAGATAGTGTTTCTTGTCATTATAACCGCATAAACAGACTCTCATCTAACATTCTAACTTCAACCCGTTTTCTTTTCGGCAGAAAATCCTCTCCTGAATTTGGAATTAAGCTTGTGGATGGGCGGATCTTTGGTGGACTCTAGCGCCGAAGGTGTTAGCAGCAGCTTATGTCTCTGCCACAGCACCTCTGAAAAGGCAGGCTTTGAGCATAGCTCATGTGCTAGCTCTGGAGATGGAAATTGTGAAGCTGGAATAGATTTTGGGCAAGATGATTTGGTTGTCAATGAAATTGGAATGGCTATTGCTGAAGTGATGCATGTCTGCAGTGATCATGATGATGATGAAGGGACAGATTCGGGTGAAGACTTTGATGAAAATGAGGGTCTACTTTCTCTGGAATCAGATTCCACTGATGATGTAGTGGATATTGATAATGAATTGGTCATATCGCCTACCTTTTCTAGTTGCAATGCATCTGAATCATCAATCAACAAATCAGACTCTGGAAATTCTTCCATTAATGTAAGTATTTGACTGCAGCCTTGTTCAACCTAACTTGTTCAATATACCTTGCCAGTTGTATTTGTTTTAGTTGTGATATCTACGCACCTAATTTGCAATAGCTACTCAGTTTCTTTTTGCATTTTTTTAATAAGCACATTAAAATCTCACTGCCTTCTTATATCATGTTGTCACTTCTGCTTTAAGAATTGGATAGCATCACTGGATGAACAGTTTCAGTTGTTGTGCTGAACTGCTGATGCCACTTGTATCATGTCCCATCAAAATCTATTCCACTTGATTTTGAGTTTATTTGAAATCATCAATGACCATAAGATCTCAGTGGGCTGTATGTGTTTTTTTCTTCCCATAAAAGATGGGGCCAAATTGTGCTTTCTAACATCACATATATGTTCATGTGCAGGGCACTCCACCGTTGGTTTCTGCAATGAAAGGAAGCCGTGCAAAGTTGGGAATCGTCACAAGTTTGAGTGTTTCATGGGCCCCTGATGTATATGATCCTCCTGTTACTTCTGGGTCTCACACTGTGAAGGGGCATCAAAGAAGTTCAAGGAAGAGCCACTACAAATACAAGCCGGCCAAGAGCAGTAGCAGCCGCAGCAGCAGTGGAAGCAAAAAGGACAGGAAGCATTCTCGCCACAGTAGCAGCAGCAGCAGCAGCAGTAACCACAAAAGAGACAGGAAACCTTCCTACCGCAACACCGTTGGTGGTGTAAGCGTCGGCAGCAGCAGCAGCAGCAGAAATACTGATGCTAGTGCTGCTCAATATCGTGATCTGTACAGCAGCAGTGGCGGCAACAGAATCGACATTGCTGTTCCTCAATACAGCAAGCTATCTCCGTTGGTGCCGTCTGAGAGTGCAACATATCGTAATGTGTACAACAGCACTAGCGGCAGCAGAACTGACCCTACCGTTCCTCATTGTAGCAAGCTATCTCCGCTGGTGACATCTGAGAGTGCATCACTTGCAGGGACCGTTCCTGTGCTGAAGACATTGGAGCCGATCAAACGCAGCTCCAGCTGCTGCAAGGAGCAGCCTTTGAGCTTTCTGTCACGCCAGTTTGTGGCTGCAAAGTACAAGGGGATGTTCTCACTATGGAGTCACAACCAGCTAGCTTCTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000605