BGIOSGA000612

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Revision as of 10:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000612| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000612, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA000612

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000612, complete gene.

LocusTag

OSJNBA0085D07.11

Ensembl Transcript ID

BGIOSGA000612-TA

Ensembl Protein ID

BGIOSGA000612-PA

Length

2817

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:38005837..38008653

Sequence Coding Region

38008012..38008653,38007578..38007778,38006972..38007065,38006830..38006887,38006651..38006720
,38006258..38006393,38006088..38006172,38005837..38005894

Genome Context

<gbrowseImage1> name=IndicaChromosome01:38005837..38008653 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:38005837..38008653 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCGCCGCGGCGGCCGACTGGCTCCCGGCCGCGGACGTGACGGCGGCGGGACGGCCGGTGCTGACCGCGGGGGAGGTCGAGCGCCACCTCGTCGCGCAGGGGGACGTGGAGCCCGAGGAGAGCCCCCGCCTCGGCCCCCTCCGCGCCCGCCTCCTCGTCCTCACCTCCCACCGCCTCATCTTCCTCCACGAGCCCTCCCGCTCCGCGCGCGCCCTCCCGCTCGCCGCCGTCGTCCACGCCTACCCGCCCCACCGCAAGCACGGCCACAACCCCCTCCGCTCCATCTTCTCCTCCTCCTCCTCGTCCTCCTCGTCGCACCACCCGCGCGTCCGCCTCCAGATCTCCCTGCCCCCGTCGCGATCGGAGGTCGTCGCCGTCGTCGTCAGCAAGGGGGAGGCCGACGTGTTCTACGGGAGGCTGCTCGAGGCCGTCCGCGCGAGGGCGTGGGAGGTGGTCGCCGCCGTGGCGGCTGCCCCCGCGGGCGGCTCCTCGGCGGCGCAGGGAGCCCCCGCGGAGGAGGATCTCGCCATCACGATGCCCGTGGTTGGGGTGTCCGGGATCCTGCGGATGGAGCAGGAGGCGTGGGAGAGCGCGGGGCAGAATCTGCAGGATGCCTTCCAGGATCTCAACGCCCTCATGAGCAAAGCTAAGGAAATGATGGAGTTAGCGGAGAAAATGAGGCAAAAGCTATTGACGAACTCATCAGCCCAATCCAATTCCAATGATGAAGAGATGGGATCTAAGCAAGACATGCAGGATTGGCTATTGAGTGTTGGAATCGTGTCCCCTGTGACGAAAGAAACCGCTGGTGCTCTGTACCACCAGCAGCTGTCACGCCAGTTGGCTGACTATATTAGAACACCACTAGAGAAAGCAGGCGGTATGATGGCACTAGTTGATGTCTATTGTCTCTACAACCGTGCAAGAGGGACAGAGTTGATCTCACCAGAGGATCTTCTGCAAGCCTGTTCCCTTTGGGAGAAATTTGACGTCCCAGTCATGCTCAGGAAATTTGACAGTGGAGTGAAGGTGATCCAGACCAAGACGCATAGTGATGATGAGGTATTTGCGAGAATCTCATCACTCGCACAAAAGGAGGATTCCCTTCAGAAGGGAATAAGCCCCAGTGATGCTGCATTTACACTTGGGATTGCACCTGCTTTAGCGAAGGAGCATCTTCTAAATGCAGAAAGCATTGGTATCCTTTGCAGGGATGTCAGTCCAGATGGGTTGCGCTTCTACATCAATCTATTTAATGAAATTGATCCCCAAAATATGTATATGCCAAAAACTCATGGAGTATACCACACATGGATATCTGTCACGGCAGCATCACAGTGA</cdnaseq>

Protein Sequence

<aaseq>MSAAAADWLPAADVTAAGRPVLTAGEVERHLVAQGDVEPEESPRLGPLRARLLVLTSHRLIFLHEPSRSARALPLAAVVHAYPPHRKHGHNPLRSIFSSSSSSSSSHHPRVRLQISLPPSRSEVVAVVVSKGEADVFYGRLLEAVRARAWEVVAAVAAAPAGGSSAAQGAPAEEDLAITMPVVGVSGILRMEQEAWESAGQNLQDAFQDLNALMSKAKEMMELAEKMRQKLLTNSSAQSNSNDEEMGSKQDMQDWLLSVGIVSPVTKETAGALYHQQLSRQLADYIRTPLEKAGGMMALVDVYCLYNRARGTELISPEDLLQACSLWEKFDVPVMLRKFDSGVKVIQTKTHSDDEVFARISSLAQKEDSLQKGISPSDAAFTLGIAPALAKEHLLNAESIGILCRDVSPDGLRFYINLFNEIDPQNMYMPKTHGVYHTWISVTAASQ</aaseq>

Gene Sequence

<dnaseqindica>1..642#876..1076#1589..1682#1767..1824#1934..2003#2261..2396#2482..2566#2760..2817#ATGTCCGCCGCGGCGGCCGACTGGCTCCCGGCCGCGGACGTGACGGCGGCGGGACGGCCGGTGCTGACCGCGGGGGAGGTCGAGCGCCACCTCGTCGCGCAGGGGGACGTGGAGCCCGAGGAGAGCCCCCGCCTCGGCCCCCTCCGCGCCCGCCTCCTCGTCCTCACCTCCCACCGCCTCATCTTCCTCCACGAGCCCTCCCGCTCCGCGCGCGCCCTCCCGCTCGCCGCCGTCGTCCACGCCTACCCGCCCCACCGCAAGCACGGCCACAACCCCCTCCGCTCCATCTTCTCCTCCTCCTCCTCGTCCTCCTCGTCGCACCACCCGCGCGTCCGCCTCCAGATCTCCCTGCCCCCGTCGCGATCGGAGGTCGTCGCCGTCGTCGTCAGCAAGGGGGAGGCCGACGTGTTCTACGGGAGGCTGCTCGAGGCCGTCCGCGCGAGGGCGTGGGAGGTGGTCGCCGCCGTGGCGGCTGCCCCCGCGGGCGGCTCCTCGGCGGCGCAGGGAGCCCCCGCGGAGGAGGATCTCGCCATCACGATGCCCGTGGTTGGGGTGTCCGGGATCCTGCGGATGGAGCAGGAGGCGTGGGAGAGCGCGGGGCAGAATCTGCAGGATGCCTTCCAGGATCTCAACGCCCTCATGGTTCGTTCCTCTCTGCTGCTCCTGCCAAGTAGTACTTGATACCATGTCCACATTTAGTTCTTGTGATGCAATCGTAATTGACTGGATTACTGGAACACCATGCTCCACAACGCAGCTAAAATGTAAAATTTCCACATTTAGTTCTTGTAACGCAGTCATATGGTATTGGAACAAATATGTTTTTACAACGCAGCTTTTTTTTTTTGTGTGTTTTGCTGCAATCTTGTAATTAGAGCAAAGCTAAGGAAATGATGGAGTTAGCGGAGAAAATGAGGCAAAAGCTATTGACGAACTCATCAGCCCAATCCAATTCCAATGATGAAGAGATGGGATCTAAGCAAGACATGCAGGATTGGCTATTGAGTGTTGGAATCGTGTCCCCTGTGACGAAAGAAACCGCTGGTGCTCTGTACCACCAGCAGCTGTCACGCCAGGTAATACATGCTTTGCTCGTGTTCTTGCTGCATTCATTGTGAAGTAGTTTTCACTGTCTGTGAAGCTCAATTGTGATGCTGATGGCAATGCATGAACTTTGTATAATATCATGCCAGCTAGACCAAATCTTCAACTTGAGAGGTTTTATCGCCATAGGATCTTCAGGATAAATTGTGTGTCCTTTTCCTCCATCAACCAAGAGCCTCTACTTCTATTGAACAGTACTTTCTGTTCATTTCTTTGCCTCATGCCTGAATTGTTTCACGCTGCTTAGTGCTTACACATTAGTTGGGTCAAATTTGGGAATCATTCAGAGGGTTTTCTTTTATTTCAACTACAGACCACAGATTTTACACTCAAGTTCTGTTTCATACACAATTGACAGGAACACCAAAAATGTCCTTGCCTGTATAACTCGTCACTGTTTTGAAGAGTTTTTATTTTCTTCTGAGTCCTCCCGGTTAGAGCAGTCTTACTAAGGCTATTTTCAACCTTTTGTATTCATTATCAGTTGGCTGACTATATTAGAACACCACTAGAGAAAGCAGGCGGTATGATGGCACTAGTTGATGTCTATTGTCTCTACAACCGTGCAAGAGGGACAGGTCTGTGCTTTTCTGCTAAGTATCTGTATGGAATTCCTTTGTTACATGTTCTGATATTGTTTTTTTTCCTTATATTTTGTGTAGAGTTGATCTCACCAGAGGATCTTCTGCAAGCCTGTTCCCTTTGGGAGAAATTTGACGTGTATGTACCCCATGTTGTAATGTGTTTTTTAGTATTTTCAGCTGGTTTGTTGCCAGCCATTAATTATGGTTCTATGTTTTGCTTATAGATGTTGATTTGTAATGAGCAGCCCAGTCATGCTCAGGAAATTTGACAGTGGAGTGAAGGTGATCCAGACCAAGACGCATAGTGATGATGAGGTAAGCACTGGCAAGAATAGGCCTAAATTTCATCATAAATTCAAGTCAAACAGTCCACACATCACACGACATAACAATCCCAAGTTAGCAGTCGCACAAAGGGTGTGGCTAAATATCTCTGGACCTTCCAATTGTTTAGTTATCTTCCATTTCATTTAATTTTTTGGTGGGCACCTGCCCACTGTTACCTTCAGATTGAACGCTACTATTATCGTTTTAAGCAGAAGCACATGCTGATTATTTGCCGATATGCATAGGTATTTGCGAGAATCTCATCACTCGCACAAAAGGAGGATTCCCTTCAGAAGGGAATAAGCCCCAGTGATGCTGCATTTACACTTGGGATTGCACCTGCTTTAGCGAAGGAGCATCTTCTAAATGCAGAAAGCATTGGTATTAGATGGTTACCCATTCAAAAAAAATTCAAGCCATGAACACTATATATAAAAAGATAAACTAATACCAACTTCTTTGTCAGGTATCCTTTGCAGGGATGTCAGTCCAGATGGGTTGCGCTTCTACATCAATCTATTTAATGAAATTGATCCCCAAAATATGTATATGTAAGTAGACCTCTTCTTGAGTCATTTGGCCTCCTCCAGTTTCTTTCAACGAATATCCTGTTTTTTTCTTGGTAAAATGAATATCAATACATGTTCATCATTAGATTTTGTCCATGCTGTTACTTGATTCAGAACATATAGCTTTATTATTGGAAAAGAGAAATATCTTTTACATTGGTAATATGCTTTCCAGGCCAAAAACTCATGGAGTATACCACACATGGATATCTGTCACGGCAGCATCACAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000612