BGIOSGA000618

From RiceWiki
Revision as of 10:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000618| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000618, complete gene.| tag = P0468B0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000618

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000618, complete gene.

LocusTag

P0468B07.49

Ensembl Transcript ID

BGIOSGA000618-TA

Ensembl Protein ID

BGIOSGA000618-PA

Length

4523

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37906175..37910697

Sequence Coding Region

37910230..37910697,37909292..37909465,37908696..37908853,37908459..37908606,37908228..37908343
,37908028..37908166,37906949..37907059,37906791..37906859,37906497..37906568
,37906175..37906261

Genome Context

<gbrowseImage1> name=IndicaChromosome01:37906175..37910697 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:37906175..37910697 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGGGAAGCAGCTCCCCTCCTCCTCCCTCGCGCGCGCGCGCGCCGCCTCCCCGCGCGGCCTCCTCGCCGCCGCCGCCCTCCTCCTCCTCCTCCTCCTCGCCGCCTCCTACTCCCTCCTCCTCTCTCCCTCCTCGCCCGGTGGCCTCGCTAGCCCTAGCTCCGGCCCCGGCTCCGCCGCCGACACCGCCTTCCTCGCCTCCCTCGACCGCTTCCTCGCCTCGCCCCGCCGCTCCGCGCCCCCCGCCGCGGCCCCCGGCGACCTCGACGCCGCGATCCGGGCCGAGGAGGAGGAAAGGCTCTACGGGGGCGGCGCCTGGCCGGCGGCCCCGGCGCCTCTCAGGGTCTACGTGTACGAGATGCCGAGCAGGTTCACGTACGATCTGCTGCGGCTGTTCAGGGACTCGTACCGCGAGACCTCCAACCTGACCTCCAATGGGAGCCCCGTGCACCGGCTCGTCGAGCAGCATTCTATTGACTATTGGCTGTGGGCTGATCTCATTGCGCCCGAATCACAAAGACTTTTGAAGAATGTTATCAGGGTTCGGCGGCAAGAAGAAGCAGACATCTTCTACGTACCATTCTTCACAACAATCAGTTACTTCTTGCTGGAGAAACAAGAATGCAAGGCACTTTATAGGGAAGCTTTGAAATGGGTTACTGATCAACCTGCTTGGCAACGTTCAGAAGGCAGAGATCATGTAATTCCCGTTCATCACCCATGGTCGTTTAAGTCAGTTCGGAGATTTGTGAAGAAGGCTATATGGCTTCTGCCTGACATGGATTCTACTGGGAACTGGTATAAACCAGGGCAAGTTTATTTGGAAAAGGATGTCATCCTTCCATATGTTCCAAATGTTGATCTTTGTGATTCTAAGTGTGTATCAGAAACTCAATCTAGAAGAAGCACATTGCTATTCTTTCGAGGAAGACTGAGAAGGAATGCTGGAGGCAAGATCCGCAGTAAACTTGTGACAGAACTAAAAGATGCAGAAGGCATAATCATAGAAGAAGGGACTGCTGGAGCTGACGGCAAAGCAGCAGCTCAGAACGGCATGCGCAAGTCTCTCTTTTGCTTGAATCCGGCTGGGGATACTCCATCTTCTGCTCGTCTGTTTGATGCAATTGTTAGTGGTTGCATACCAGTTATAGTCAGTGATGAACTAGAGCTTCCTTTTGAAGGAATACTTGACTACAGGAAGATAGCTTTGTTCGTTTCGTCAAATGACGCTGTTCAACCTGGTTGGCTGGTGAAGTACCTGAGAAGCATTGATGCCAAAAGGATCAGACAAATGCAATCAAATCTTCTGAAGTACTCTAGACATTTTCTATATTCAAGTCCTGCTCGACCTCTTGGACCTGAAGATCTTACATGGAGAATGATTGCTGGTAAGCTGGTAAACATCAAGTTGCATATTCGACGGTCTCAACGCGTGGTCAGAGAGTCAAGGAGCATATGCAGTGTGCCAAATCCTGTGATGATAGAAACTTTATACTCAGATTGCATGACACCCAATGTTAAGGAACAAGATGTCCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MAGKQLPSSSLARARAASPRGLLAAAALLLLLLLAASYSLLLSPSSPGGLASPSSGPGSAADTAFLASLDRFLASPRRSAPPAAAPGDLDAAIRAEEEERLYGGGAWPAAPAPLRVYVYEMPSRFTYDLLRLFRDSYRETSNLTSNGSPVHRLVEQHSIDYWLWADLIAPESQRLLKNVIRVRRQEEADIFYVPFFTTISYFLLEKQECKALYREALKWVTDQPAWQRSEGRDHVIPVHHPWSFKSVRRFVKKAIWLLPDMDSTGNWYKPGQVYLEKDVILPYVPNVDLCDSKCVSETQSRRSTLLFFRGRLRRNAGGKIRSKLVTELKDAEGIIIEEGTAGADGKAAAQNGMRKSLFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSNDAVQPGWLVKYLRSIDAKRIRQMQSNLLKYSRHFLYSSPARPLGPEDLTWRMIAGKLVNIKLHIRRSQRVVRESRSICSVPNPVMIETLYSDCMTPNVKEQDVL</aaseq>

Gene Sequence

<dnaseqindica>1..468#1233..1406#1845..2002#2092..2239#2355..2470#2532..2670#3639..3749#3839..3907#4130..4201#4437..4523#ATGGCGGGGAAGCAGCTCCCCTCCTCCTCCCTCGCGCGCGCGCGCGCCGCCTCCCCGCGCGGCCTCCTCGCCGCCGCCGCCCTCCTCCTCCTCCTCCTCCTCGCCGCCTCCTACTCCCTCCTCCTCTCTCCCTCCTCGCCCGGTGGCCTCGCTAGCCCTAGCTCCGGCCCCGGCTCCGCCGCCGACACCGCCTTCCTCGCCTCCCTCGACCGCTTCCTCGCCTCGCCCCGCCGCTCCGCGCCCCCCGCCGCGGCCCCCGGCGACCTCGACGCCGCGATCCGGGCCGAGGAGGAGGAAAGGCTCTACGGGGGCGGCGCCTGGCCGGCGGCCCCGGCGCCTCTCAGGGTCTACGTGTACGAGATGCCGAGCAGGTTCACGTACGATCTGCTGCGGCTGTTCAGGGACTCGTACCGCGAGACCTCCAACCTGACCTCCAATGGGAGCCCCGTGCACCGGCTCGTCGAGCAGGTGAGATCGAACTGCTTTCTGCATAGTCGTGGAGAGTGGAGCGTGCTTGGGTTTGAATTTTTTTTGTTCGCAAATGGTGACAAGATTGAGAAAATTGATGTGGATTGCTTGCTGTTTTGGGGTGAGAAGCATTGTGCTACTGTATGATGCAACATTGCAAGTATTCTCTGATGCTTTGGAAGGTTTGGAGATGTTACTGCTACAAGCTTGTGTATACATTAGATCTTAGTGGGTTGATATATTCTGATCCCATTAAGGACTTGTTACCATAGTTTTTCTTTTCTAAAAAAATTGGCGATTGATTAGATACGACCGTGTGATGTATTTGGGATCCGATGCTATCTTGTGAGGTGCATGTGCTTCTGGGTTGGATCCAATTCATAGAGTAGTTTTAGATTTTGATTTTTGTGGCAAGTTTTGTGAGAAGTGAGCTCTGGATATTCCTGACCAGTGACCACATGTAGTTTTTGATGCTAGACATCTTTGTGATTCCTGTTACATTTGCTATTTAGTCTGTACAAATTGGTAGTCATTTGTGTTTCAAGACAGCGGTTGAAGTTTGAACAATGCTCAATTTTGTTTTAACATTACAGATTCCGTACTTAGTGATGTACATCATGTGTCAATCGAGCTTCTGATGTTCTCTTTAAGATCCTGGAATAACTATCTCAATTTGGAAGGATATAATTAACCAGGTTTCACTTGTCGGCAGTATGTTTTTCTTTTTTTCCAATCTCTGATTTGTTATCTGCTCACATATGCAGCATTCTATTGACTATTGGCTGTGGGCTGATCTCATTGCGCCCGAATCACAAAGACTTTTGAAGAATGTTATCAGGGTTCGGCGGCAAGAAGAAGCAGACATCTTCTACGTACCATTCTTCACAACAATCAGTTACTTCTTGCTGGAGAAACAAGAATGCAAGGCACTTTATAGGGTGTGGGAGCATCTCTCAAGGTTTATTTTTCAGCTAGTGTTTGTTGTAGGGTATGCACATGGACTAGCTAGTGTTTATTTACAACTAAAATTTTGATAGTTCCTGCTGGCAGTCTGGCATTCAATACTCAGTAGTAAAGAGAGTTGAACTTTTCTCTAGTCATAACTGGAATAGGGCAGGGCTTTACCTGAGCTCAGTTTTCTTACCACTTTTTGTGATGGCTTTTCTTGGTTCACTTGACTGTAGGGATCATTTTCATCTATTTCTCCACGTGTTGCACAATATATTCACCTAAGTTTATTATCAAGTGGACTTTGTCCTGAAATTTGTTCACCTAGGTGGCTAGGTTTATTTACAGAAGGATATTGTCATGAAATTTCTTCACCCAAGTTTATTTGCAAGAGGACAGTATTGATATTGTTGTTTTGTTGGTGTTAGGAAGCTTTGAAATGGGTTACTGATCAACCTGCTTGGCAACGTTCAGAAGGCAGAGATCATGTAATTCCCGTTCATCACCCATGGTCGTTTAAGTCAGTTCGGAGATTTGTGAAGAAGGCTATATGGCTTCTGCCTGACATGGATTCTACTGGGAACTGGTATGGTATTAATTGTCTGCTGCTTTGCCTTAAATAGCTTCTGCGTGCAATAGTTGTGTTACCAAACTCAGTTTCGCCCCTTTTCTCAGGTATAAACCAGGGCAAGTTTATTTGGAAAAGGATGTCATCCTTCCATATGTTCCAAATGTTGATCTTTGTGATTCTAAGTGTGTATCAGAAACTCAATCTAGAAGAAGCACATTGCTATTCTTTCGAGGAAGACTGAGAAGGAATGCTGTATGCTTCTTCTTGTCATTTTCCAGTTTTCGACAGCATGAAATACATGCACGCAATACTTCAAATTCAAGTTGGCTTATGTGAATCTTAATTCTTTATTCTGTTTTTTGTTTAGGGAGGCAAGATCCGCAGTAAACTTGTGACAGAACTAAAAGATGCAGAAGGCATAATCATAGAAGAAGGGACTGCTGGAGCTGACGGCAAAGCAGCAGCTCAGAACGGCATGCGCAAGTAAATATACAATTCTATTTTATTTGTATTGTAGCTGTTACTGAATATATTTGACTGGCAGGTCTCTCTTTTGCTTGAATCCGGCTGGGGATACTCCATCTTCTGCTCGTCTGTTTGATGCAATTGTTAGTGGTTGCATACCAGTTATAGTCAGTGATGAACTAGAGCTTCCTTTTGAAGGAATACTTGACTACAGGAAGGTAAACTTGGTTTATCGCAGTATTAATGCACTGTTTTCTCATACCACATATCTTAGTAAAGGTTTTACTACGTACTCCCTCTGTTTCAGGTTATAAGACGTTTTGATTTTGGTCAAAGTCAAACTGCTTCAAGTTTGACTAAGTCTGTAGAAAAAATAATAATATTTTCAACTCAACACAAATTTATTATGATTCAATTATTGATTTAATGAAACTAATTTGGTATTATAAATATTACTATATTTGTGCATAAACTTAGTCAAATTTAAAGTAGTTTGACTTTGACCAAAGTCAAAACGTCTTATAACCTGAAACGGAGGGAGTATATCTGAGTGGAGCTCCAAAAATTGATGTCTTGCTTGAAGAACGGGATGCTGTGCTACTTTCTATTTGCATGCCCCAAACAATCAACAAATGGCCATGTATATGTCAATAGTCAGAGACTTAGGGTAGCTCAATGGCCATGTTGTCAGCTAGTTTGACAGGTCTGGATTCAATTCTACAAAGGCTATTTGTAGCAACCCTACTTTTCTGCACCAGTTAAGTCTGAAGTTTCTGTGATTTCCTTTTTTTTTTTTTTTGGGGGGGGGGGGGGTCTGTGAAATTTGACATGCCTATTAGTTCAGTATACTTCAGGAGTTTTTTTACTTTGTGTACTTGCACCATGTGCTTATGCTTGTGATAAAAAACAAGGAGAGAAACTACCTCAGTGATTTTCCATTATAAATTAAATAAAGGCCCTCGGTGATTGATCCACTATAAACTAAAGAGCAGTTGGTTGCTATTCTGCATATACTTCACAATCTGTGGATACTTCATGTCTTGAATAACCAACATGTTTACTCGAGTCTTTTATGGTAGCATGATGGTTTTTTCATGTATTTCGCATTTGCATTTGTGTTGCTGCAATTTAAAGCACATATTTTCTATAATGAACTGCAGTGTGCAATGATTGATTTGTTCTGCAGATAGCTTTGTTCGTTTCGTCAAATGACGCTGTTCAACCTGGTTGGCTGGTGAAGTACCTGAGAAGCATTGATGCCAAAAGGATCAGACAAATGCAATCAAATCTTCTGAAGGTTAGCTTGGTATTTTAACATATATTGCATGAAGTTTTTCGGAAGCTTCAATTTTGTGGACAGCAATTTTACTTGTGATTCATTTACAGTACTCTAGACATTTTCTATATTCAAGTCCTGCTCGACCTCTTGGACCTGAAGATCTTACATGGAGAATGGTAATTCTATTCAAACCTTTGTAGCATCCCTAGATACTTAAGTAGCTGTGCCATGAAAAGAGAGATTTTCTTGCAACAACTTTTGTTAACACCACAAGCATTCCCATCACTCTATGCACATCATGCTTTAAAGAGCTAAGGTGTTTCATTTGCAGTTGCATTTTTATTTATGTAAATCCCCTCAATGAATCCATATGCCCACTTATGGAACCTGAAATGCAGATTGCTGGTAAGCTGGTAAACATCAAGTTGCATATTCGACGGTCTCAACGCGTGGTCAGAGAGTCAAGGAGCGTATGTACATGCGACTGCAGAGTGGGGAACAGCACGAAGATGTTTTGAATCTACCTTCTGTTTTGTCTTTCCTACTTCCATAGCTTAGCGATTCTTTAGTTATTACTTGCCCGGGCTTCTGATCACTAAGGCGCTTGTGTAAATTGTTCTTGAAAAAACACATCATAGTTTTGATCCATTTTGCCCGTAACATGTGTAATTGGGGTGTAACAATACTTCGGTTGAAGACTTGCAGATATGCAGTGTGCCAAATCCTGTGATGATAGAAACTTTATACTCAGATTGCATGACACCCAATGTTAAGGAACAAGATGTCCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000618