BGIOSGA000623

From RiceWiki
Revision as of 10:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000623| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000623, complete gene.| tag = OS01G08...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000623

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000623, complete gene.

LocusTag

OS01G0810000

Ensembl Transcript ID

BGIOSGA000623-TA

Ensembl Protein ID

BGIOSGA000623-PA

Length

2505

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37826211..37828715

Sequence Coding Region

37828660..37828715,37828378..37828468,37827839..37827930,37827657..37827750,37827470..37827549
,37827278..37827361,37826862..37826961,37826296..37826384,37826211..37826214

Genome Context

<gbrowseImage1> name=IndicaChromosome01:37826211..37828715 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:37826211..37828715 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTTCGCTGCGGAACGCGATCCAGCGGCGCGCTCACAAGGAGCGCGCCCAGCCGGAGTCGAGGAAGAAGTTTGGGCTTCTGGAGAAGCACAAGGACTACATCGTTCGGGCGAAGGCTTTCCACCAGAAGGAGGAAACCATCAGGAAATTGAAGGAGAAGGCATCATTTAGAAACCCTGATGAGTTCTATTTTAAGATGATCAACAGCAAGACTGTTGATGGAATTCATAGGCCTAAGCCTGAAGCAAACAAGTATACTGAAGATGAACTCATGCTGCTAAAAACTAAAGATATGGGATACATCCTTCAGGGTATTCAGAGTGAAAAGAAGAAAATTGAAAAATTAAGCTCCATGCTTCATGAACTAGACAACAAGCGACCAAACAAGCATGTTTACTTTGCTGAAGACAGAGAAGAGGTCAAAGAAATACAATCTAGAATAGAACAAAAGAGCAGTTCACTTGGTTTGGACAACATCCCTTCCCGTATAAAGAGGAAAACTGCTTCGTCCTATAGGGAGTTAGAGGAGAGGAAACAGAGGGTTCAAAAGCTTGAGAAACTGTATGCAGACATGGCCTTGCAGAAAGAGTTGAAGAAACCTGGACGGAAAAGAAAACTCCGTGAGGATGAGATTGAGAATCAAACATCCCGGCCTGTTTATAAGTGGCGAGCACAACGGAAGCGATGA</cdnaseq>

Protein Sequence

<aaseq>MSSLRNAIQRRAHKERAQPESRKKFGLLEKHKDYIVRAKAFHQKEETIRKLKEKASFRNPDEFYFKMINSKTVDGIHRPKPEANKYTEDELMLLKTKDMGYILQGIQSEKKKIEKLSSMLHELDNKRPNKHVYFAEDREEVKEIQSRIEQKSSSLGLDNIPSRIKRKTASSYRELEERKQRVQKLEKLYADMALQKELKKPGRKRKLREDEIENQTSRPVYKWRAQRKR</aaseq>

Gene Sequence

<dnaseqindica>1..56#248..338#786..877#966..1059#1167..1246#1355..1438#1755..1854#2332..2420#2502..2505#ATGTCTTCGCTGCGGAACGCGATCCAGCGGCGCGCTCACAAGGAGCGCGCCCAGCCGTAAGTTCATCTCCACCCACTAACGCTTCAGACCTCGAGCCTGCTCTGATCTTGTTCGATTCTGCATGCCATGGCGCCGCCGCTGGGTGCGCGGGCGCCACTTGAAGGGATTTTCTTATGCGCTCTGCGGCAGTTTCTGTGTTGTGTGCCGGATTTCTGGACTGACCTGGGATTGTGGTGGGGTTTGTCAGGGAGTCGAGGAAGAAGTTTGGGCTTCTGGAGAAGCACAAGGACTACATCGTTCGGGCGAAGGCTTTCCACCAGAAGGAGGAAACCATCAGGGTATGGTTCTACACTTGACGTTTCTGGCGCTTAGGAAACTCGGGAAATTAGCTACGTTTTACCAGAACTGCAAGTGTTTGCATGTTACTCCTATAACCATCCAACATTCTATTGTCTCAATTGTGTGTGCTAAGCGATTTTCTGTTTTCAACGATTCTGTGAGATTGACTAGCCGTTCCCTGATAATGGAGCTATTTATTATTGACATTTAGGGGGATTTTGGGAGATTTGTATTTGCTTTTAGGAATATTAGGCAAATTAAATCTTAGACTTTGGATGGTGTAAGTTAAAGTTTAGTCTCCTCTGTAGGGAGACATCACCATATTTGAACAGTTGAACAGTTTAGGACGTAGGGGATACAGAACATTTTCTTCTGTTTGTTGTTATATTTCTTGCGATTATGAATAGTGCAACTGTCCTAACCTATGTGTTCCTGCTTAATTACAGAAATTGAAGGAGAAGGCATCATTTAGAAACCCTGATGAGTTCTATTTTAAGATGATCAACAGCAAGACTGTTGATGGAATTCATAGGCCTAAGTATGTACAGCTTGGTTCTTTTTGTAGTTTATGGCTTGAACTACTAGTACTTCGTGTTTTAATTTTAATTTGGACTGTCATATACAAGGCCTGAAGCAAACAAGTATACTGAAGATGAACTCATGCTGCTAAAAACTAAAGATATGGGATACATCCTTCAGGGTATTCAGAGTGAAAAGAAGGTTTGTGATGATGTTCAGCATATTTAAAGCAAACAAGTATACTGAGGAGGAACTCTTCAGGTTAAATGATTTATTCTATCCTAATTTTGAATTTGACTCCGTTGTAGAAAATTGAAAAATTAAGCTCCATGCTTCATGAACTAGACAACAAGCGACCAAACAAGCATGTTTACTTTGCTGAAGACAGGTACATGCCACTACATTCATGTTGAGTTTCAAATTTGTCGTTGCCATTTTGAATTGTTAGCTAGCTAAGCCTATGTCAATATTGAGTTGAATATTTGTTTTGTTTCAGAGAAGAGGTCAAAGAAATACAATCTAGAATAGAACAAAAGAGCAGTTCACTTGGTTTGGACAACATCCCTTCCCGTATAAAGAGGTACATGGCACTTCTATTTGGAACAAGGTTAATTATTAGTATTATACTCATGAACAACCAGTTCCACACTTTATCTACTTAATGAGGTACTTGTTTTCATCTTTTGTTGGAAAACTACCTTTAGTTAATGAATGTACATGTTTTTGTGTACGTGCATGTCCTGTTCACCACTGATGTGCTTGCCATAACGAAACTACTTAGTTGTAATGTTTTTGTGTTGTATGAGTTTGTTTCTCCAGCTTAAAGAATTACCATGTGCACTTTAGTGCATTGACCACTACATGATGAACTTATCCTGCCATCAAATCCTTTCCAGGAAAACTGCTTCGTCCTATAGGGAGTTAGAGGAGAGGAAACAGAGGGTTCAAAAGCTTGAGAAACTGTATGCAGACATGGCCTTGCAGAAAGAGTTGAAGGTATTGGATATCTGTCATTAAATAGAGTTCTTATCTTTGCATAGGTGTAAGTCTTTCTAAGTACTTTGGTGAGTTGAAGTTTACTTAGAATGGTACAATGATAAGTGGTAAGAAACTGGATTGAATGATTGATGCTGGTTGGGTGCAAATAAATGCTAACTGTTTGGATGGAACTTGCTCACTGTTTGGTATATAGTCAATTATGCATTTTTTTGCAGTTTCTCTTAAATAAAATTAGTGAAGTTCAATGTTTGCACTTAACATATTGTGAGTTAAGCAAGTCAGTTGAACCTGATCATATTTCAGAAGCACTATAAGCGTAAAATGGCCTGAATTTAGAATCTGCAAAGTATTTTGTGAGATTTTTTGAGCAGGTATTTGATGGTACAGGATATTCTATGATCGCTTCTATTTAAACTTGATTGAATATTTATATTGTTTAACTGTTCAGCTACTAACTTTTCTAATTTGGGGTAGAAACCTGGACGGAAAAGAAAACTCCGTGAGGATGAGATTGAGAATCAAACATCCCGGCCTGTTTATAAGTGGCGAGCACAACGGAAGCGGTAAGGTACAATTGCTGTCTTTTGCTCTTACTTCCTTGCTGACCTATTGATTTCCACTTACCGTCGTTCATCGATCTTCAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000623