BGIOSGA000629

From RiceWiki
Revision as of 10:08, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000629| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000629, complete gene.| tag = OsI_041...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000629

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000629, complete gene.

LocusTag

OsI_04130

Ensembl Transcript ID

BGIOSGA000629-TA

Ensembl Protein ID

BGIOSGA000629-PA

Length

3822

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37563079..37566900

Sequence Coding Region

37566810..37566900,37566266..37566389,37565850..37566030,37565698..37565764,37564639..37564790
,37564447..37564548,37563079..37563234

Genome Context

<gbrowseImage1> name=IndicaChromosome01:37563079..37566900 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:37563079..37566900 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACAAGACGGAACACACCCACAGGCCAAAAAACCGTAGCAGAAAAGCCGTCCGCTGGCCTGCTCACGGGCTCACGGCGCAGCCACGAAGACAATGCGCCGGTGTCGAGGGCCGTGGTGGTCGCCGCCGCGCTCTTCTCCGTCGCCTTCGGCTTCCGCGGCCGCTTCCTCGACCTCGGCCTCTCCTACGAGGCAAGTCTCCCTGCCCCTACCCGACAGCTGATGAGGTTACCCTTACCATCCCTTCCAATGCAGAATGTTTATGGAAAGCTGCGGATTTGGAAGCTGATCACCTCGTTGTTTGCTTTTTCATCAACGCCTGAACTTATCTTTGGAGCTGCCTTGCTGTACTACTTTAGGGTGTTTGAACGGCAAATAGGTTCAAACAAGTATTCTGTTTTCATAGTCTTCTCCACAGCGGTGTCCGTACTGCTTCAGATCCTTTCTTTGGCTTACCTGAAAGGTCCTTCTTTAAATCCATTGACATCTGGGCCATATGGCCTCATATTTGCGTCTTACATACCATTCTTCTTTGACATTCCAATCACAACAAAGTTTCGCATATTTGGGTTGCGCTTAAGTGACAAGTCATTCATATATTTGTCAGGACTCCAGCTACTTTTCTCATCTGGATGGCGTTCAATTATACCTGGACTTTCTGGTATACTGGCTGGGCTTTTGTATCGTCTGAATATATTTGGCATCCGCAGGTTGAAGGGTGTGCACCCAACTACAGAAGATCCAATGGAGTCTTCAATCGCTACACTTGTTTCCATGGGTTTTGATCGTGGTTCTGCAATACGGGCTCTTGCACTGACAAATTATGATGTTAATTTGGCCTCAAACATTCTTCTTGAAGCACAATCCATGTAG</cdnaseq>

Protein Sequence

<aaseq>MTRRNTPTGQKTVAEKPSAGLLTGSRRSHEDNAPVSRAVVVAAALFSVAFGFRGRFLDLGLSYEASLPAPTRQLMRLPLPSLPMQNVYGKLRIWKLITSLFAFSSTPELIFGAALLYYFRVFERQIGSNKYSVFIVFSTAVSVLLQILSLAYLKGPSLNPLTSGPYGLIFASYIPFFFDIPITTKFRIFGLRLSDKSFIYLSGLQLLFSSGWRSIIPGLSGILAGLLYRLNIFGIRRLKGVHPTTEDPMESSIATLVSMGFDRGSAIRALALTNYDVNLASNILLEAQSM</aaseq>

Gene Sequence

<dnaseqindica>1..91#512..635#871..1051#1137..1203#2111..2262#2353..2454#3667..3822#ATGACAAGACGGAACACACCCACAGGCCAAAAAACCGTAGCAGAAAAGCCGTCCGCTGGCCTGCTCACGGGCTCACGGCGCAGCCACGAAGGTATTGGATCAACGACCAACCGAGTGATCGAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGGGTTAGAAGGGGTGAAGCTGGAGCTGTGTCAACAGTCCTGAGTGTCAACCGACTCCGCCGCTGGGCGTTCCAGAAGCCGCTGGTCGCTGGGCACCGACCCGCCCTCTCTCCTTCCTTCCGGCCATCGCGGCGGCGCGGCTGCCGGCGATGAGCGGCGGGCTCCCCGGATTCCGTACGCCATCTCTCTCCCGCCCCCCTCTTTAACCCCCCTCCAAAAAACCGAATCGAACTCTGAATCGTTAAGGCTTCTCAACTGTTGCAAATCTCAGTAGCAGCGCGATTTCACTTGGATCAACCGACCCGATTCGATTTTTTTTTTTTTGGCCTTGCAGACAATGCGCCGGTGTCGAGGGCCGTGGTGGTCGCCGCCGCGCTCTTCTCCGTCGCCTTCGGCTTCCGCGGCCGCTTCCTCGACCTCGGCCTCTCCTACGAGGCAAGTCTCCCTGCCCCTACCCGGTGCTCGTAGCCTCGCACTAGATCCACCCTGCTCCTGCGAGCGCTCCGCACGCGCGTGGAGGCGCCACTTGTTTGTTGTGTTTTTGGGATCAGCAAGTGGGAGCCGCACGGGCAAATTCTGCGTTGTGATGCAGTATTAACTGGTGTTTTGAATCCTCGTTGGCCATGTCGAATTGGTTCAGTTTGAGCTGCAGTGGGTTATGTTAATGGGGGATCTTATACAATGTTGCTTTAGACAGCTGATGAGGTTACCCTTACCATCCCTTCCAATGCAGAATGTTTATGGAAAGCTGCGGATTTGGAAGCTGATCACCTCGTTGTTTGCTTTTTCATCAACGCCTGAACTTATCTTTGGAGCTGCCTTGCTGTACTACTTTAGGGTGTTTGAACGGCAAATAGGTTCAAACAAGTATTCTGTAAGTGGTTCTTGTGCCTAAGATGCCATGCATCATCTTTGCCTGCTTCATTAGCTAATATTGATGAGCTTATTTAAACATGTAGGTTTTCATAGTCTTCTCCACAGCGGTGTCCGTACTGCTTCAGATCCTTTCTTTGGCTTACCTGAAAGGTATGATTTTGCCTTTAGCTTTCTTCACAATATATTGCCCTGTTAAATACTGCTCAAATGAGTGCCCCACTTTATTTATCTTCAGTTTCATTGATAATTCGTAGGAATGCTTATTTGCCACATTTGTGCATAAACATTAGAAGTTGATGTCCTTGTGGATCCCAGCTATAAACAGAAGGTGCTTTGCATTTTATGATGGCAATCAATTGACAAACTAAACATTACTGCATAAGTAAAATCACTAAGAACAACATTTATGTTGAGATCCTTAGGATTAACAACATTTATGTTGAGATCCTTAGGATTATAGTCACTCTGAAGAGCAATATGGAAAGCTGAAGGTAAAACTTTGACAATTTCTGGGAGTTGGCAATGGATTTCTTACACATAGCGAGGCAATAGATTCTTTTTATCATGTGTGCAAAAGATTTGAATTTCTAATTACTGTTTGCCACATTCCTACCTGTGCTGACAAGCGCTAGGTTCCTTATATTTTCAAGGGACATAGTGCTAATTTGGATTGTTTCCTGTGTGCCTAGTATCAACAATGAGCTCTTTTGTATTCATTCAAGCATTGATAATTTTAAGTTTTTTTTACACCACTCCTAACTGGATCAATAAATGTTTCGCATAAGTCATTTCCTGCGTATAAACTTCCCTTGAAAGATGCTAGTTGATGAGAACAACTAATACTAAGGCTAGTTTGCATGACATTAGATTTTATTTATCTTCTATAATTTGCTAGCTTCCATAACAAATCAATTGGTTGTTCTGCTTGTTTTTCTTTTGCTGGTTTTTTCTTTTTGGTGATTTTTGTACTTCTTCTGTTTCTTTCGTGTTTTGCAATGACATGAATTTTATATATTTCTTTTTTTTTTCATCTGACATGTTAATGCTTGGAGTGCAGGTCCTTCTTTAAATCCATTGACATCTGGGCCATATGGCCTCATATTTGCGTCTTACATACCATTCTTCTTTGACATTCCAATCACAACAAAGTTTCGCATATTTGGGTTGCGCTTAAGTGACAAGTCATTCATATATTTGTCAGGACTCCAGGTCAATTCTAACTTCCATGATAACTTCTATCCTCGTCTTATCTCTTCCCCAGTTCCTCTGTCTTGTAGCTTATGTATCTTCGATTTTCAGCTACTTTTCTCATCTGGATGGCGTTCAATTATACCTGGACTTTCTGGTATACTGGCTGGGCTTTTGTATCGTCTGAATATATTTGGCATCCGCAGGTTGAAGGTAAACTAACTTCTTTCTAGAACTGTATATAGTATTTCTAGTTTCTACACCATGTTGAAGTATCAATTAATAACCACACTCTCTGCATGCAATTACCGTTGCTAGTCTAGTCTATATCCAATGTGTGATCCAGATGGTACAATAGTTCTGTAGGCATGTGCAGTCTCTAAAATCATGTTTATATTCATCTTGAGGTGGCAGATGACCTTGTTTTGCTATTCTTGTTTTGTTGTTATGGCTTGTCATGCCATTATTTGTACTTATCTCATCTGTGGTAAGTTCCTATAATGGTATGTATAAACAAATATCTGTTGCCACATTGTAAAAGAAACTTCGAATCACTGCAGCTCCCAGATTCGATGACATCACTGCTCTCGCGGTTTTCATGCCCCTTCTTGAACAACTCTTATCAACGACTACCAGTTACAGAAAATGATGGAAACATTCCTTCTAACCAGACTCGTCAAACTGAGGCAAGTATTTATACTGTATTTGTTACAATAGCTCATGTTCAGCATTACTTATGTTGATGTTATTGAGGGACATTTGATGATAAATTCGTTTTTTTGGGTAAATGGGGGATAGTGCCAAAAGTTGTAAAAGAACACTCAATCAAAGGCGTCATGTTCCATTTAGCATCTGTATGGCACAATAATATAAATGATTAATCTAGTAACTAGATTATGCCGGTAATCATGTTCTATATAATCTCCTTTAAAGATGAAAATCTTGAAACAAGCTTCAATGCTTACTTTTTAGCACCTTGCTGCTGCTGCTCTTGTATCTAAAGTTACCCTGTAACTGATCTTAGTATTGAATATTTCCAGTAGTTCATTTCTTTTACATAGAAAGAACAATTGTCTTAATGTTCATGCCAGTTCTCCAATCTTCAACGCATTCCTCGTTTAGGGATCAAAGTACTGGTTCTGGCCTCCAAGGAACGCATCACTGTGCTAATTAAAGCACATAAAGCTTATGGCTACAGACATTTGAGTTTTCCTTGGTGCAGTACGGTAGTAGTGATAATACGAGGCATCTTCGACAGCCAACAAATTTACTGCTCGTCTGTACTTTTTCCCCAGTTTATTACTACGGTCTCTTTAGCGAGGCTAGATGGTTCTCTTTATCCTGATTATTGAACATATAATGCATTCCCTGGTATACGTGATCTTTCTATTGAAACTTCTCTCTTATTATTGTTATCTTATCCAGGGTGTGCACCCAACTACAGAAGATCCAATGGAGTCTTCAATCGCTACACTTGTTTCCATGGGTTTTGATCGTGGTTCTGCAATACGGGCTCTTGCACTGACAAATTATGATGTTAATTTGGCCTCAAACATTCTTCTTGAAGCACAATCCATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000629