BGIOSGA000654

From RiceWiki
Revision as of 10:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000654| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000654, complete gene.| tag = P0699H0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA000654

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000654, complete gene.

LocusTag

P0699H05.31

Ensembl Transcript ID

BGIOSGA000654-TA

Ensembl Protein ID

BGIOSGA000654-PA

Length

4690

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37149529..37154218

Sequence Coding Region

37153993..37154218,37153791..37153863,37152468..37152526,37151495..37151576,37151240..37151360
,37151118..37151159,37150442..37150972,37149950..37150057,37149658..37149858
,37149529..37149561

Genome Context

<gbrowseImage1> name=IndicaChromosome01:37149529..37154218 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:37149529..37154218 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCCGCGCAGAAGCGCCGGCTCTCGTCGTCGCCGTCTTCGAGGCCCCGCGACCACGTGGAGACTAACGGGATGACTGGTGCTTCGAAGGCCGCCGCCGGCAGCGGCGGCGGAGGAGGAGGAGGAAGCGGAGGGGGAGTTCCGCTGCCGCCGAGGGGAGGTTCCGCCGCCGCCGCCGCCGCCGCCGCCAAGCGGGCGGCTGACCCGCAGCCTCAGCGCGAAGGCGATTCGGACGCGGAGTTCGGCGGCGGCGTGGACGGCGACAGCGAGTCGTCGCAGAGCGACGGCGACATGGACGAGTTCATAATAGTGAAATTAGCAGAAATACGAAAGGAGGTCCAATGCCCTATCTGTTTAGGGATTATCCGGAAAACAAGAACTGTTATGGAGTGTTTACATCGGTTTTGCAGGGATTGCATAGATAAATCTATGCGGCTAGGAAATAATGAATGCCCAGCATGCCGCACTCACTGTGCAAGTAGACGTTCTTTGAGGGATGATCCTAATTATGATGCATTGATTGCTGCCCTATATCCAGATATTGATAAATACGAAGAAGAGGAACTTGCTTTCAGTGAAGAGGAGAGGAGTCGGAACAAAAAGATCCAAGCAACAATTGAGGAAACAATTCGAAGACAGTCAGAGGCAGTTGGTAAAAAGCGTTCCACAGCCAAAGCAACTGCCACTGTTTTCGCAAGGAAGTACAGGAGAAATATGCGAACGCGTGGTAGAGGTAAAACCATTGCTCCTGATATCGCCCCTACTGGCTCAGACAATGAGGATAGAGAAGAAGGAAATGCCATTGATACCACCAAGGAGTCATCTTCTGCTGATGACCGCTCTTCAGATTTAATGCCAAAAAGAGGTAGGAAAAGGCCCGCATCACGAGCATCTCCTGCTAGAACCATTGGCAGCAGTGACCATGGCTTTGAGGAGAACGATGAGCTGATAGGCGGAAAAGAAAGTTTCACCACGTCTCCATTGCGGGGGGAGATGCTTGCATGGGGCAAAAATGGAACACGAAGCCAAACAAGACATGGCAGTGTTGGTGGTTCAAATGGCAGAATGGCAAAGGGTGGACGCGTTGCAAAGTTGGTGGACCACCTCCGTACTACTGATGATATGGATAAGGAGTTCAACTTGTATCTTGTTCTCCTTCCTCTTGATGAACAAAGTATGCCTAACTTGGAGAAGCCCTATGTAAGTTGTCGACCAACCTTGTCCATTCGGCATCTTGTACAGTTCATTGCTCTGCAGTTGTCTCGGCAAGTTGAAGAACTTGATATCTTTATGAGGATAGACCACTGCAATGGAAGTGTTACAACACAGGACTGCACTACAGGTGTTGCAAAAATGCGTTTATCTGATGGCCTGGAAAGAATAAGGGAGGATAAACTTCTTTCAGAGCTTCATCCTTCTTTTACTTCTCATCACGGTGATCTGGAATTGCTGTATGCTTTGAAAACTCAAGGCTAG</cdnaseq>

Protein Sequence

<aaseq>MPAQKRRLSSSPSSRPRDHVETNGMTGASKAAAGSGGGGGGGSGGGVPLPPRGGSAAAAAAAAKRAADPQPQREGDSDAEFGGGVDGDSESSQSDGDMDEFIIVKLAEIRKEVQCPICLGIIRKTRTVMECLHRFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAALYPDIDKYEEEELAFSEEERSRNKKIQATIEETIRRQSEAVGKKRSTAKATATVFARKYRRNMRTRGRGKTIAPDIAPTGSDNEDREEGNAIDTTKESSSADDRSSDLMPKRGRKRPASRASPARTIGSSDHGFEENDELIGGKESFTTSPLRGEMLAWGKNGTRSQTRHGSVGGSNGRMAKGGRVAKLVDHLRTTDDMDKEFNLYLVLLPLDEQSMPNLEKPYVSCRPTLSIRHLVQFIALQLSRQVEELDIFMRIDHCNGSVTTQDCTTGVAKMRLSDGLERIREDKLLSELHPSFTSHHGDLELLYALKTQG</aaseq>

Gene Sequence

<dnaseqindica>1..226#356..428#1693..1751#2643..2724#2859..2979#3060..3101#3247..3777#4162..4269#4361..4561#4658..4690#ATGCCCGCGCAGAAGCGCCGGCTCTCGTCGTCGCCGTCTTCGAGGCCCCGCGACCACGTGGAGACTAACGGGATGACTGGTGCTTCGAAGGCCGCCGCCGGCAGCGGCGGCGGAGGAGGAGGAGGAAGCGGAGGGGGAGTTCCGCTGCCGCCGAGGGGAGGTTCCGCCGCCGCCGCCGCCGCCGCCGCCAAGCGGGCGGCTGACCCGCAGCCTCAGCGCGAAGGCGGTGAGTTTTTCGTGGCGTCGACGTCGAGGCCTCCCATCTCCCCCGCGGCCGGCCGCGATATGCATGTCGCGTTCGGGGTCTCCGTGCGAATATGGCTAAGAGGCTTGTGTGTTTCGATGGGCTTGGCAGATTCGGACGCGGAGTTCGGCGGCGGCGTGGACGGCGACAGCGAGTCGTCGCAGAGCGACGGCGACATGGACGAGTGAGTCTTCCTTCCTTCCTTCCGTCCCTCCTCCGCTCCCTCTCCGACCCCATCCGGCCTCTTCTGTCTCCTCTGACTGCTACGCTATTTGGCTTTTGGAGCCCCCCTCGCGGTGCCACGACCCGAATACTAGCTCCGGTTCGTCGTATAGTACTTCGGTGGTTCTGCGAGATGCCGCCATGCCGGCCGGAGCTGGTATGCTCGGGGAGTCGTCGGTATTGGACATGGTTGCTTCGTCGTGTGTTCGGGTCGTATCTATGCAAGCGATCGCATGCGTTTACATAATATGGTATACAGATTGTCTATGCTAGCTGCGCTGCCAACACATACGATCTCGTAGGTAGTACTGCACACCACACTAATGCCGGAGATTGCTGGGAAACGTAGTCTATGGATCTCACTGTCTCAGCTGTGCAACCTGTTTGCGCTGTACTTTTGTGCTGGAGTCACCTCTTTCATCTGAACTGCTCTGTTCCACGTGGTTTCAGTTGAACGTTGAAGCTTGGAAGAGTTCTGTTTAACAGTTGTTTTTCCGTCGATGTATGCTGATACTTTTCCAATGATTGTGAGTTTTTTTTTAATAATTTCCGTTACAAAGACATAGATGATTTTCGTTGATGTTGCCTTAATCTGGTGTTCTAAATCTGCTTGCTTTTTGGGACTTGGAGGTCTCCTGTAACCCTGTTTACTACAGGGGCATTATCTTCCTTGTTATTTTTCAATGTCCTTTCAGCGGGTTGTCTTATAAGAAATATGCATTCTACGGACGTTCATGAGATTCAAGATTCTCTAAATCATATTTTATCTTAACACAGATTTGGTTGTCTTAATGCTGAAGCCTTACCTAATTACATCATTGGAATTTGGATCCATTATAGATGATAGTCGAAGCTCAACTAGGAACATTGCTATGCGTGTGACCTCCTGGATGGATGAATGTGCTCAAATGTTCATCTCGACTAAAATCAGAACATCTTCTTTTGCATGTTTAAGTTTCTGAAATCTGGGGTTATATAGTTTCTGAACAGGAACTATATGCCATTGTTCAGTTTGTAGTTAAATACTTGCCTTCACTTATATCTTGCTTTTTTTAATCATTGAGTGGTTTCTCAATAGCTATGTTTTCAAGCTAATGTTGCACTGCTTTATTTTTTATTACACTAGGATGTATGGTATAAATCTAAGATCAATATTCAGGGGCATACATGCTGAAAGATAATGTTTCCCACAGGCTGAAGCTTATATGGACCTATTTCTCATGCAGGTTCATAATAGTGAAATTAGCAGAAATACGAAAGGAGGTCCAATGCCCTATCTGTTTAGGTAAGGATTTTTCCCCTTGAGTTTTGCAGAGATTTGGATATAATATTGATTGCTTATATTCACGCTTGAAAGTAAACCTGGACATGCCAATCCATGCATCCTTATGTTTATGTGCATGCATGAGCCATTTTGTATCTACATAATTTAACATAATATAGCCAACATTTGCACCGCTGTTGTGTAAGATGATTTAAACTAGCATAAAACCCTGATGTCATTATTACATCTTTTGTCAATAAATAAATGCACTACTATGCGCATCTTAATTGTCAAATAGATGAATGAATTTAGCATGGCTGTAGTAAAGTTAGTTTCTTTATAACTAGGATTTTTTTTCCAATTTTGTTTTATTAGTAATTACATTTGAACTACAGGAACTATAGCCGATAAGTCTATATGTTGAATGGCTGATACTAATTGCCTGCTCAGGAGAATCTGATTCTTGTTTTTAGCATGATTACATGCATTGCTGGTTTGGTGGATAGTGCCAATTGTAACTTTCACTCTTTGTTTGGACAGTTACTGCTGACAGTATTATTTTCATAATCACTATGGTTTCACCTAGAATCACTCCATCTGTAGTTTCTATAGTAATTATTATATGGGCCAAATATCATGTGCTATATCCGATGGTATATCCTACCCAATTAGAAACCAAACAGTGCAGTTTGTCGCCTCTTCGTTTTACAAAACATGTCACAGCAGACAAATTAAAAGTCTAGGTTAAATACTATTTTCATGCATTGGACAGACCTGATGAAACCCAAGTAAAAAAAAAAAAAAACTGTAACTTGCAAGTTTGAAATTTTAGATTTAACATTAAACTACACATGACATTTTCTGTCATGTGAAACTATGCCATAATAACCATCTGATCCTTATGCTTCGCAGGGATTATCCGGAAAACAAGAACTGTTATGGAGTGTTTACATCGGTTTTGCAGGGATTGCATAGATAAATCTATGCGGCTAGGGTATGGTGCTATACATCTGTTATGTGAAATATCAGTTTTCAGAAGGAAAATGTAGAATTTACAAAAAATGATTTCTAAGCAATAAAAGAGAACATTCTTTGTTTGACAATATAAATAATGCACTTATTTAGCAGAAATAATGAATGCCCAGCATGCCGCACTCACTGTGCAAGTAGACGTTCTTTGAGGGATGATCCTAATTATGATGCATTGATTGCTGCCCTATATCCAGATATTGATAAATACGAAGAAGAGGTGATGTCTATGTGCCTTGTCATTATTTATTTGTTTGGTTTTCTTTGGCCTGGGTGCTTATAATATTTTTTTACCTGCAGGAACTTGCTTTCAGTGAAGAGGAGAGGAGTCGGAACAAAAAGGTGAGCTTATCTCTTTGGTACTACTGTAAAAGCCAGCAGACTGTATCTCGCATCTGAAGTAGAAAATTGATGCAAAATTAAGTTCTCTCTTCACCATCTATTTTTTGTTTTATCATCATATTTAACATTTTTTTTTACATTGAAGATCCAAGCAACAATTGAGGAAACAATTCGAAGACAGTCAGAGGCAGTTGGTAAAAAGCGTTCCACAGCCAAAGCAACTGCCACTGTTTTCGCAAGGAAGTACAGGAGAAATATGCGAACGCGTGGTAGAGGTAAAACCATTGCTCCTGATATCGCCCCTACTGGCTCAGACAATGAGGATAGAGAAGAAGGAAATGCCATTGATACCACCAAGGAGTCATCTTCTGCTGATGACCGCTCTTCAGATTTAATGCCAAAAAGAGGTAGGAAAAGGCCCGCATCACGAGCATCTCCTGCTAGAACCATTGGCAGCAGTGACCATGGCTTTGAGGAGAACGATGAGCTGATAGGCGGAAAAGAAAGTTTCACCACGTCTCCATTGCGGGGGGAGATGCTTGCATGGGGCAAAAATGGAACACGAAGCCAAACAAGACATGGCAGTGTTGGTGGTTCAAATGGCAGAATGGCAAAGGGTGGACGCGTTGCAAAGTTGGTGGACCACCTCCGTACTACTGATGATATGGATAAGGAGGTATTGTACTTCATTTGTGATAGATTATGAATTCCTTTCTGTATAAATTTCCTTTTTTCTAAAGATATTCTTTCACACCTATAATTTGGAAATTCATAAATTTTCTAGGATCTAAACTATATGATGTTTGAAGTTTTAAGATACAACATAAACTGTATGCTGTTTGAAATATTTTTCAAAAATAAGAAGAAAAAAAACAACGTTCCATGCTATGTGGTGATAGTGTTCCTGAGCTTTAATGCTTGCTATTTTTATTGTCACATGTTCTGGTTGTTCTATTCATGCAATCCACAAGTGCATGAATAAGCAGTGTCTGAGGCTCTAAGCTAAACATACAAGGAGCACGTGCCAGGTAGCTGAATTTTCTATATATTTATTTTGCAGTTCAACTTGTATCTTGTTCTCCTTCCTCTTGATGAACAAAGTATGCCTAACTTGGAGAAGCCCTATGTAAGTTGTCGACCAACCTTGTCCATTCGGCATCTTGTACAGGTTATTGCTTGCACCTAAAGTTCTTTTATTAGTTTTGAAATGTTCTTGCTGGTTGATCTAACCAAAGGTTGTAAATCTTGTTTGCTTCCAGTTCATTGCTCTGCAGTTGTCTCGGCAAGTTGAAGAACTTGATATCTTTATGAGGATAGACCACTGCAATGGAAGTGTTACAACACAGGACTGCACTACAGGTGTTGCAAAAATGCGTTTATCTGATGGCCTGGAAAGAATAAGGGAGGATAAACTTCTTTCAGAGCTTCATCCTTCTTTTACTTCTCATCACGGTGATCTGGTAAGTTCAAATATCCGCATGAATTCAGCTTCCACATGTTTTTTTTTGTTTATTCTTGCACTTCTGATGTACTCTGCGTTTCCATTCAATTGTTAGGAATTGCTGTATGCTTTGAAAACTCAAGGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000654