BGIOSGA000677

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Revision as of 10:09, 26 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA000677| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA000677, complete gene.| tag = P0415A0...")
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Gene Name

BGIOSGA000677

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA000677, complete gene.

LocusTag

P0415A04.18-1

Ensembl Transcript ID

BGIOSGA000677-TA

Ensembl Protein ID

BGIOSGA000677-PA

Length

1430

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36837737..36839166

Sequence Coding Region

36838930..36839166,36838573..36838758,36838291..36838456,36837737..36838158

Genome Context

<gbrowseImage1> name=IndicaChromosome01:36837737..36839166 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:36837737..36839166 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATTGTTGGGCGTCCTCGTCAGGGCGGTGATCATCGTCGTCGCCGCCGCGGCCGCCGTTTCGGGCAGCGGGCTGCCGGTGCCTGGATACGACGGGCTCGCCATCGGGTTCTACCACGAGACGTGCCCACAGGCGGAGGACCTGGTGCTCGCCGAGATGAGGGAGATCGTCCAGGAGGACAGGACCCTCGCGCCGGCGCTCCTGCGGTTCATGCTCCACGACTGCTTCGTCAGGGGGTGTGACGCGTCCATCATGCTGAAATCGCGGGAAAAAATCGGGGAGAGGGACGCCAACTCGAGCTACAGCCTCCGCGGCTACGAACAGATCGAAAGGATCAAGGCCAAGCTGGAAGATGAGTGCCCGATGACCGTGTCGTGTGCGGACATCATCGTCATGGCCGCGCGGGACGCCGTGTTCCTGAGCAACGGCCCACGGTACCAGGTGGAGACCGGACGCAGGGACGGCAAGGTGTCCTGTACCATTGACGCCGACAACGATCTCCCACCGCCCGGCTCCAACATTGTCGACCTCAAGATCTACTTTAGTGTCAAGAACCTGGGATGGAAGGACCTCGTCGTCCTATCAGGGAGCCACACGATAGGGAGGGCGCAGTGCGGCTCGTTCGCGCGCGACAGGCTGTACAACTACAGCGGGGAAGGGAGGCAGGACCCGTCGCTGAACACGGCGTACGCGCCGGAGCTGAGGAAGGCGTGCGTGGCCGGCGACCCTTTCGACAAGACGTACGTGGACATGGACCCGGGGAGCCCGTACACGTTCGACCTGAGCTACTACCGGGACGTGTACAGCAACAGGGGCCTCTTCGTCTCCGACCAGGCCCTCCTCAATGACAAGTGGACCAGGCAGTACGTGGAGAGGATGGCGTCCGCGGATTCGACGGACGAGTACTTCAGGGACTACGCGGAGGCCATGACCAACATGGGGAGGATCGAGGTGCTCACCGGCGACAACGGCGAGATCAGGAAGGTGTGCGGCGCGTACGTTGACTAG</cdnaseq>

Protein Sequence

<aaseq>MALLGVLVRAVIIVVAAAAAVSGSGLPVPGYDGLAIGFYHETCPQAEDLVLAEMREIVQEDRTLAPALLRFMLHDCFVRGCDASIMLKSREKIGERDANSSYSLRGYEQIERIKAKLEDECPMTVSCADIIVMAARDAVFLSNGPRYQVETGRRDGKVSCTIDADNDLPPPGSNIVDLKIYFSVKNLGWKDLVVLSGSHTIGRAQCGSFARDRLYNYSGEGRQDPSLNTAYAPELRKACVAGDPFDKTYVDMDPGSPYTFDLSYYRDVYSNRGLFVSDQALLNDKWTRQYVERMASADSTDEYFRDYAEAMTNMGRIEVLTGDNGEIRKVCGAYVD</aaseq>

Gene Sequence

<dnaseqindica>1..237#409..594#711..876#1009..1430#ATGGCATTGTTGGGCGTCCTCGTCAGGGCGGTGATCATCGTCGTCGCCGCCGCGGCCGCCGTTTCGGGCAGCGGGCTGCCGGTGCCTGGATACGACGGGCTCGCCATCGGGTTCTACCACGAGACGTGCCCACAGGCGGAGGACCTGGTGCTCGCCGAGATGAGGGAGATCGTCCAGGAGGACAGGACCCTCGCGCCGGCGCTCCTGCGGTTCATGCTCCACGACTGCTTCGTCAGGGTGCGTGCCTCGCGTGCTCGATCCCTTCCTCAGTTTCTCATCATGTCGCGTGGCGTCGCGGGCACGAACCCTCGTGCGTCGATGTCGCGTCGCCGTGGTGCGTGCTGCTGATCAATGGACGATGGGTTTTTGATGTATGTTTGTGCTTGCTTGGCTTCGCGTGGCGTGCAGGGGTGTGACGCGTCCATCATGCTGAAATCGCGGGAAAAAATCGGGGAGAGGGACGCCAACTCGAGCTACAGCCTCCGCGGCTACGAACAGATCGAAAGGATCAAGGCCAAGCTGGAAGATGAGTGCCCGATGACCGTGTCGTGTGCGGACATCATCGTCATGGCCGCGCGGGACGCCGTGTTCCTGGTAATGACGCCAACTCCCTGGCTACTTTAATTCGAGATCAGTAGTATAATCCGATCGCCGTGATCTTTATTATCGTTCATCCCGACGTACGTTGACGAGCGGCTTCGTTTTACCAGAGCAACGGCCCACGGTACCAGGTGGAGACCGGACGCAGGGACGGCAAGGTGTCCTGTACCATTGACGCCGACAACGATCTCCCACCGCCCGGCTCCAACATTGTCGACCTCAAGATCTACTTTAGTGTCAAGAACCTGGGATGGAAGGACCTCGTCGTCCTATCAGGTACGCAATACCGCAAATACCAGCGTCCAGTAGTACTTTTGGTCAGTGCGAGCAAAAGCACACACAATATCCATTCACCAGCTTCAATTTCTGCTCGATTTTGCGCGTGATTTTGTGCGTGATTTTCCGCAGGGAGCCACACGATAGGGAGGGCGCAGTGCGGCTCGTTCGCGCGCGACAGGCTGTACAACTACAGCGGGGAAGGGAGGCAGGACCCGTCGCTGAACACGGCGTACGCGCCGGAGCTGAGGAAGGCGTGCGTGGCCGGCGACCCTTTCGACAAGACGTACGTGGACATGGACCCGGGGAGCCCGTACACGTTCGACCTGAGCTACTACCGGGACGTGTACAGCAACAGGGGCCTCTTCGTCTCCGACCAGGCCCTCCTCAATGACAAGTGGACCAGGCAGTACGTGGAGAGGATGGCGTCCGCGGATTCGACGGACGAGTACTTCAGGGACTACGCGGAGGCCATGACCAACATGGGGAGGATCGAGGTGCTCACCGGCGACAACGGCGAGATCAGGAAGGTGTGCGGCGCGTACGTTGACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA000677